RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 PCDHA6Q9UN73 950 aa9.34□□□□□ -0.91
ITSN1-216ENST00000428240 PCDHA8Q9Y5H6 950 aa9.34□□□□□ -0.91
ITSN1-216ENST00000428240 RIF1Q5UIP0 2472 aaKnown RBP9.34□□□□□ -0.91
ITSN1-216ENST00000428240 KAT6AQ92794 2004 aa9.34□□□□□ -0.91
ITSN1-216ENST00000428240 BAZ2BQ9UIF8 2168 aaKnown RBP9.33□□□□□ -0.92
ITSN1-216ENST00000428240 IGKV6D-21A0A0A0MT36 114 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 hCG_1642624A0A1W2PR95 340 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 SPDYE3A6NKU9 549 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 ZBTB42B2RXF5 422 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 HIP1O00291 1037 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 GPR32O75388 356 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 KRT37O76014 449 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 ATG7O95352 703 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 PLEKHA8P1O95397 391 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 CXCL14O95715 111 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 EOMESO95936 686 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 VTNP04004 478 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 CYP21A2P08686 494 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 EPCAMP16422 314 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 PPM1AP35813 382 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 CRYBB1P53674 252 aaPredicted RBP9.33□□□□□ -0.92
ITSN1-216ENST00000428240 ANTXR2P58335 489 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 ITGB3BPQ13352 177 aaPredicted RBP9.33□□□□□ -0.92
ITSN1-216ENST00000428240 KIAA2013Q8IYS2 634 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 SIX5Q8N196 739 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 SLC39A11Q8N1S5 342 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 LRRC43Q8N309 656 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 PLCD3Q8N3E9 789 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 SRBD1Q8N5C6 995 aaKnown RBP9.33□□□□□ -0.92
ITSN1-216ENST00000428240 DTWD2Q8NBA8 298 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 KCNG4Q8TDN1 519 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 IGDCC4Q8TDY8 1250 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 AUTS2Q8WXX7 1259 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 MXRA8Q9BRK3 442 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 CYP26B1Q9NR63 512 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 SEC63Q9UGP8 760 aaKnown RBP9.33□□□□□ -0.92
ITSN1-216ENST00000428240 USTQ9Y2C2 406 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 R4GN57 208 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 FRYLO94915 3013 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 GVINP1Q7Z2Y8 2422 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 LOXHD1Q8IVV2 1947 aa9.33□□□□□ -0.92
ITSN1-216ENST00000428240 FAM186AA6NE01 2351 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 NFASCO94856 1347 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.32□□□□□ -0.92
ITSN1-216ENST00000428240 E7EWF7 191 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 DDX39AO00148 427 aaKnown RBP9.32□□□□□ -0.92
ITSN1-216ENST00000428240 HBP1O60381 514 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 CCNE2O96020 404 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 LMNAP02545 664 aaKnown RBP9.32□□□□□ -0.92
ITSN1-216ENST00000428240 ATP4AP20648 1035 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 METAP2P50579 478 aaKnown RBP eCLIP9.32□□□□□ -0.92
ITSN1-216ENST00000428240 TDGQ13569 410 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 CLLU1OSQ5K130 101 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 ATAT1Q5SQI0 421 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 ODR4Q5SWX8 454 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 ABHD15Q6UXT9 468 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 TMC5Q6UXY8 1006 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 FAM43BQ6ZT52 329 aaPredicted RBP9.32□□□□□ -0.92
ITSN1-216ENST00000428240 TMEM173Q86WV6 379 aaPredicted RBP9.32□□□□□ -0.92
ITSN1-216ENST00000428240 CCDC60Q8IWA6 550 aaPredicted RBP9.32□□□□□ -0.92
ITSN1-216ENST00000428240 ZNF654Q8IZM8 581 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 ABI1Q8IZP0 508 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 RNF169Q8NCN4 708 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 CTCFLQ8NI51 663 aaPredicted RBP9.32□□□□□ -0.92
ITSN1-216ENST00000428240 PGBD1Q96JS3 809 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 RTP3Q9BQQ7 232 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 SDF4Q9BRK5 362 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 KCNK12Q9HB15 430 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 AGO4Q9HCK5 861 aaKnown RBP9.32□□□□□ -0.92
ITSN1-216ENST00000428240 DUSP12Q9UNI6 340 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 WDR87Q6ZQQ6 2873 aa9.32□□□□□ -0.92
ITSN1-216ENST00000428240 ZNF292O60281 2723 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 BACH1O14867 736 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 HOXA2O43364 376 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 NARSO43776 548 aaKnown RBP9.31□□□□□ -0.92
ITSN1-216ENST00000428240 C22orf31O95567 290 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 RXRAP19793 462 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 SMARCA1P28370 1054 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 SLC26A2P50443 739 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 BCAR1P56945 870 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 PTH1RQ03431 593 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 SART3Q15020 963 aaKnown RBP9.31□□□□□ -0.92
ITSN1-216ENST00000428240 TRMT1LQ7Z2T5 733 aaKnown RBP9.31□□□□□ -0.92
ITSN1-216ENST00000428240 RALYLQ86SE5 291 aaKnown RBP9.31□□□□□ -0.92
ITSN1-216ENST00000428240 CHD1LQ86WJ1 897 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 ECHDC2Q86YB7 292 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 VPS52Q8N1B4 723 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 NCOA7Q8NI08 942 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 HELQQ8TDG4 1101 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 SLC22A17Q8WUG5 538 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 RIN2Q8WYP3 895 aaPredicted RBP9.31□□□□□ -0.92
ITSN1-216ENST00000428240 CNTNAP3BQ96NU0 1288 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 MAP3K14Q99558 947 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 CNTNAP3Q9BZ76 1288 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 ZBP1Q9H171 429 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 LY9Q9HBG7 655 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 DZANK1Q9NVP4 752 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 FBXL21Q9UKT6 434 aa9.31□□□□□ -0.92
ITSN1-216ENST00000428240 U3KPZ7 1027 aaPredicted RBP9.31□□□□□ -0.92
ITSN1-216ENST00000428240 COL1A2P08123 1366 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms