RNA–Protein interactions for RNA: ENST00000427445.6

TPTE-201, Transcript of transmembrane phosphatase with tensin homology, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TPTE, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-201ENST00000427445 SREBF1P36956 1147 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 ARHGAP4P98171 946 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 ODF2Q5BJF6 829 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 GKAP1Q5VSY0 366 aaPredicted RBP10.75□□□□□ -0.69
TPTE-201ENST00000427445 SFR1Q86XK3 245 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 CATSPER3Q86XQ3 398 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 RHOT2Q8IXI1 618 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 PIAS4Q8N2W9 510 aaPredicted RBP10.75□□□□□ -0.69
TPTE-201ENST00000427445 RBM46Q8TBY0 533 aaKnown RBP10.75□□□□□ -0.69
TPTE-201ENST00000427445 UBLCP1Q8WVY7 318 aaPredicted RBP10.75□□□□□ -0.69
TPTE-201ENST00000427445 CTNNBL1Q8WYA6 563 aaPredicted RBP10.75□□□□□ -0.69
TPTE-201ENST00000427445 TATDN2Q93075 761 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 PGM2Q96G03 612 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 FMO2Q99518 471 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 REEP2Q9BRK0 252 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 TMEM109Q9BVC6 243 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 COA1Q9GZY4 146 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 KDM4CQ9H3R0 1056 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 GCNT4Q9P109 453 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 CNOT7Q9UIV1 285 aaKnown RBP10.75□□□□□ -0.69
TPTE-201ENST00000427445 SYNPO2Q9UMS6 1093 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 ASTN1O14525 1302 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 SYNGAP1Q96PV0 1343 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 CCDC169A6NNP5 214 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 USP17L10C9JJH3 530 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 DDX3XO00571 662 aaKnown RBP eCLIP10.75□□□□□ -0.69
TPTE-201ENST00000427445 CYP3A4P08684 503 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 SHMT1P34896 483 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 RDXP35241 583 aaKnown RBP10.75□□□□□ -0.69
TPTE-201ENST00000427445 DNA2P51530 1060 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 PPATQ06203 517 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 TRAPPC3LQ5T215 181 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 RNF187Q5TA31 235 aaPredicted RBP10.75□□□□□ -0.69
TPTE-201ENST00000427445 FBXW10Q5XX13 1052 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 CCDC13Q8IYE1 715 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 BORCS6Q96GS4 357 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 CRAMP1Q96RY5 1269 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 TUFT1Q9NNX1 390 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 CCNL1Q9UK58 526 aaPredicted RBP10.75□□□□□ -0.69
TPTE-201ENST00000427445 PCDHA1Q9Y5I3 950 aa10.75□□□□□ -0.69
TPTE-201ENST00000427445 POTEFA5A3E0 1075 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 PODXLO00592 558 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 AKAP3O75969 853 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 GSTA1P08263 222 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 POTEIP0CG38 1075 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 ACTN1P12814 892 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 ERCC3P19447 782 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 HPDP32754 393 aaPredicted RBP10.74□□□□□ -0.69
TPTE-201ENST00000427445 IFT88Q13099 833 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 QRICH1Q2TAL8 776 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 NBPF9Q3BBW0 867 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 KRT71Q3SY84 523 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 DCAF17Q5H9S7 520 aaPredicted RBP10.74□□□□□ -0.69
TPTE-201ENST00000427445 POTEGQ6S5H5 508 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 POTEEQ6S8J3 1075 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 HHIPL2Q6UWX4 724 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 BTNL9Q6UXG8 535 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 TBC1D16Q8TBP0 767 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 TMEM174Q8WUU8 243 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 SYT11Q9BT88 431 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 AMNQ9BXJ7 453 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 DDX47Q9H0S4 455 aaKnown RBP10.74□□□□□ -0.69
TPTE-201ENST00000427445 ZHX3Q9H4I2 956 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 DDX20Q9UHI6 824 aaKnown RBP10.74□□□□□ -0.69
TPTE-201ENST00000427445 LOXHD1Q8IVV2 1947 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 FRMPD4Q14CM0 1322 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 NPHP3-ACAD11A0A0J9YXS1 232 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 ANKRD62A6NC57 917 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 DAPK3O43293 454 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 SPATA31C1P0DKV0 1188 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 HOXD13P35453 343 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 SEC24CP53992 1094 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 GALCP54803 685 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 DHX9Q08211 1270 aaKnown RBP10.74□□□□□ -0.69
TPTE-201ENST00000427445 DUPD1Q68J44 220 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 C11orf63Q6NUN7 778 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 SLC9A9Q8IVB4 645 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 FAM186BQ8IYM0 893 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 ANKS4BQ8N8V4 417 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 NEK9Q8TD19 979 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 U2AF1L4Q8WU68 220 aaKnown RBP10.74□□□□□ -0.69
TPTE-201ENST00000427445 SEC16BQ96JE7 1060 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 ERP44Q9BS26 406 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 AP1M1Q9BXS5 423 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 PABPC3Q9H361 631 aaKnown RBP10.74□□□□□ -0.69
TPTE-201ENST00000427445 CCDC134Q9H6E4 229 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 KANSL2Q9H9L4 492 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 PPANQ9NQ55 473 aaKnown RBP10.74□□□□□ -0.69
TPTE-201ENST00000427445 KLC4Q9NSK0 619 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 AMACRQ9UHK6 382 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 RABGAP1Q9Y3P9 1069 aa10.74□□□□□ -0.69
TPTE-201ENST00000427445 SPDYE3A6NKU9 549 aa10.73□□□□□ -0.69
TPTE-201ENST00000427445 MEIS2O14770 477 aa10.73□□□□□ -0.69
TPTE-201ENST00000427445 P4HA2O15460 535 aa10.73□□□□□ -0.69
TPTE-201ENST00000427445 DDX3YO15523 660 aaKnown RBP10.73□□□□□ -0.69
TPTE-201ENST00000427445 ASAP2O43150 1006 aa10.73□□□□□ -0.69
TPTE-201ENST00000427445 EVI5O60447 810 aa10.73□□□□□ -0.69
TPTE-201ENST00000427445 NPM3O75607 178 aaKnown RBP10.73□□□□□ -0.69
TPTE-201ENST00000427445 DNAJC8O75937 253 aaPredicted RBP10.73□□□□□ -0.69
TPTE-201ENST00000427445 CHRNA3P32297 505 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms