RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 BTNL10A8MVZ5 291 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 FAM86B1E9PN63 330 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 ZBTB39O15060 712 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 FAM13AO94988 1023 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 FAM86B2P0C5J1 330 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 CYP2J2P51589 502 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 PLTPP55058 493 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 MTMR3Q13615 1198 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 C15orf52Q6ZUT6 534 aaKnown RBP8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 FAM186BQ8IYM0 893 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 CTNNBL1Q8WYA6 563 aaPredicted RBP8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 RAPGEF5Q92565 580 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.18□□□□□ -1.12e-6■■■■■ 104.5
SMARCC1-202ENST00000425518 TYW1Q9NV66 732 aaKnown RBP8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 SUCLA2Q9P2R7 463 aaPredicted RBP8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 DNAJC12Q9UKB3 198 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 LAMB1P07942 1786 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 FRMD3A2A2Y4 597 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 CES2O00748 559 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 MEIS2O14770 477 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 LRRN2O75325 713 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 FSBPO95073 299 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 SERPINB2P05120 415 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 KRT13P13646 458 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 FERP16591 822 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 RPA1P27694 616 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 POLD1P28340 1107 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 PRKCIP41743 596 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 CDR1P51861 262 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 PDE4CQ08493 712 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 BIRC3Q13489 604 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 DRAP1Q14919 205 aaPredicted RBP8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 EMC10Q5UCC4 262 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 CCDC13Q8IYE1 715 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 LNX1Q8TBB1 728 aaPredicted RBP8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 CEP89Q96ST8 783 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 CD248Q9HCU0 757 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 SIX2Q9NPC8 291 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 CHORDC1Q9UHD1 332 aaPredicted RBP8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 SNX24Q9Y343 169 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 RABGAP1Q9Y3P9 1069 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 RREB1Q92766 1687 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 RGL2O15211 777 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 TRIM49P0CI25 452 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 TRIM49CP0CI26 452 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 TNFAIP3P21580 790 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 RBM5P52756 815 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 COG2Q14746 738 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 CDC42EP5Q6NZY7 148 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 TMC3Q7Z5M5 1100 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 CERS5Q8N5B7 392 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 FMO2Q99518 471 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 SELENOSQ9BQE4 189 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 ZC3H12CQ9C0D7 883 aaKnown RBP8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 TMOD4Q9NZQ9 345 aa8.18□□□□□ -1.1
SMARCC1-202ENST00000425518 PPP1R12BO60237 982 aaPredicted RBP8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 ACTN3Q08043 901 aaPredicted RBP8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 LLGL1Q15334 1064 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 AADACL2Q6P093 401 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 ZC3H3Q8IXZ2 948 aaKnown RBP8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 ETNPPLQ8TBG4 499 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 SEC16BQ96JE7 1060 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 SLITRK6Q9H5Y7 841 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 SLC12A6Q9UHW9 1150 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 ASTN1O14525 1302 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 CCDC88AQ3V6T2 1871 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 EML1O00423 815 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 MSH4O15457 936 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 TRAPPC3O43617 180 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 BBOX1O75936 387 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 PSMC2P35998 433 aaKnown RBP8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 SPIRE1Q08AE8 756 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 CACNA2D3Q8IZS8 1091 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 C1orf131Q8NDD1 294 aaKnown RBP8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 EIF2AK1Q9BQI3 630 aaKnown RBP8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 GLT8D2Q9H1C3 349 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 FAM114A2Q9NRY5 505 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 KLC4Q9NSK0 619 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 TAS2R14Q9NYV8 317 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 PNMA2Q9UL42 364 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 STXBP5LQ9Y2K9 1186 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 DAAM1Q9Y4D1 1078 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 F8VZ95 297 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 TGFB1I1O43294 461 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 CAND2O75155 1236 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 CLSTN1O94985 981 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 GDF11O95390 407 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 RDXP35241 583 aaKnown RBP8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 SOX5P35711 763 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 UBXN2AP68543 259 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 DR1Q01658 176 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 CERKLQ49MI3 558 aaPredicted RBP8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 CHADLQ6NUI6 762 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 MAEAQ7L5Y9 396 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 EPM2AIP1Q7L775 607 aaPredicted RBP8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 CCDC91Q7Z6B0 441 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 SLFN11Q7Z7L1 901 aa8.17□□□□□ -1.1
SMARCC1-202ENST00000425518 FBXO11Q86XK2 927 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms