RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 SEPT9Q9UHD8 586 aaPredicted RBP20.05■□□□□ 0.8
SBDSP1-202ENST00000423945 GINS2Q9Y248 185 aa20.05■□□□□ 0.8
SBDSP1-202ENST00000423945 ARID2Q68CP9 1835 aa20.04■□□□□ 0.8
SBDSP1-202ENST00000423945 IGKV6-21A0A0C4DH24 114 aa20.04■□□□□ 0.8
SBDSP1-202ENST00000423945 MGEA5O60502 916 aa20.04■□□□□ 0.8
SBDSP1-202ENST00000423945 POU3F3P20264 500 aaPredicted RBP20.04■□□□□ 0.8
SBDSP1-202ENST00000423945 PAK2Q13177 524 aa20.04■□□□□ 0.8
SBDSP1-202ENST00000423945 GRB10Q13322 594 aa20.04■□□□□ 0.8
SBDSP1-202ENST00000423945 FAM228AQ86W67 206 aa20.04■□□□□ 0.8
SBDSP1-202ENST00000423945 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.04■□□□□ 0.8
SBDSP1-202ENST00000423945 TGS1Q96RS0 853 aaKnown RBP20.04■□□□□ 0.8
SBDSP1-202ENST00000423945 C17orf80Q9BSJ5 609 aa20.04■□□□□ 0.8
SBDSP1-202ENST00000423945 TMEM60Q9H2L4 133 aa20.04■□□□□ 0.8
SBDSP1-202ENST00000423945 PRDM6Q9NQX0 595 aa20.04■□□□□ 0.8
SBDSP1-202ENST00000423945 MTUS1Q9ULD2 1270 aa20.04■□□□□ 0.8
SBDSP1-202ENST00000423945 MTCH2Q9Y6C9 303 aa20.04■□□□□ 0.8
SBDSP1-202ENST00000423945 RALGAPA2Q2PPJ7 1873 aa20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 DDX11L8A8MPP1 907 aa20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 LINC00271P0C7V0 271 aa20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 QARSP47897 775 aaKnown RBP20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 CRYBB1P53674 252 aaPredicted RBP20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 EPHA7Q15375 998 aa20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 PLA2G4FQ68DD2 849 aa20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 NCAPH2Q6IBW4 605 aa20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 SLFN12Q8IYM2 578 aa20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 ZNF579Q8NAF0 562 aaKnown RBP20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 GDPD5Q8WTR4 605 aa20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 PPM1EQ8WY54 764 aa20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 ZNF668Q96K58 619 aaPredicted RBP20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 MTMR9Q96QG7 549 aa20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 YME1L1Q96TA2 773 aa20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 FTHL17Q9BXU8 183 aa20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 TSPYL2Q9H2G4 693 aaPredicted RBP20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 SUGCTQ9HAC7 445 aa20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 RGL1Q9NZL6 768 aa20.03■□□□□ 0.8
SBDSP1-202ENST00000423945 KIAA1671Q9BY89 1806 aa20.02■□□□□ 0.8
SBDSP1-202ENST00000423945 RPS6KA5O75582 802 aa20.02■□□□□ 0.8
SBDSP1-202ENST00000423945 P4HBP07237 508 aaKnown RBP20.02■□□□□ 0.8
SBDSP1-202ENST00000423945 NLRP11P59045 1033 aaKnown RBP20.02■□□□□ 0.8
SBDSP1-202ENST00000423945 TBC1D8BQ0IIM8 1120 aa20.02■□□□□ 0.8
SBDSP1-202ENST00000423945 NFX1Q12986 1120 aaKnown RBP20.02■□□□□ 0.8
SBDSP1-202ENST00000423945 CCDC85BQ15834 202 aaPredicted RBP20.02■□□□□ 0.8
SBDSP1-202ENST00000423945 CALCRLQ16602 461 aa20.02■□□□□ 0.8
SBDSP1-202ENST00000423945 ZNF689Q96CS4 500 aaPredicted RBP20.02■□□□□ 0.8
SBDSP1-202ENST00000423945 DYDC2Q96IM9 177 aa20.02■□□□□ 0.8
SBDSP1-202ENST00000423945 TMX3Q96JJ7 454 aa20.02■□□□□ 0.8
SBDSP1-202ENST00000423945 FOXP1Q9H334 677 aaPredicted RBP20.02■□□□□ 0.8
SBDSP1-202ENST00000423945 ST3GAL5Q9UNP4 418 aa20.02■□□□□ 0.8
SBDSP1-202ENST00000423945 AKT3Q9Y243 479 aa20.02■□□□□ 0.8
SBDSP1-202ENST00000423945 ZBTB39O15060 712 aa20.01■□□□□ 0.79
SBDSP1-202ENST00000423945 ST18O60284 1047 aa20.01■□□□□ 0.79
SBDSP1-202ENST00000423945 NEMFO60524 1076 aa20.01■□□□□ 0.79
SBDSP1-202ENST00000423945 MAFO75444 373 aaPredicted RBP20.01■□□□□ 0.79
SBDSP1-202ENST00000423945 BAG4O95429 457 aaKnown RBP20.01■□□□□ 0.79
SBDSP1-202ENST00000423945 GPC3P51654 580 aa20.01■□□□□ 0.79
SBDSP1-202ENST00000423945 NPEPPSP55786 919 aa20.01■□□□□ 0.79
SBDSP1-202ENST00000423945 SAFBQ15424 915 aaKnown RBP eCLIP20.01■□□□□ 0.79
SBDSP1-202ENST00000423945 FAM184AQ8NB25 1140 aa20.01■□□□□ 0.79
SBDSP1-202ENST00000423945 MAP7D2Q96T17 732 aa20.01■□□□□ 0.79
SBDSP1-202ENST00000423945 LXNQ9BS40 222 aa20.01■□□□□ 0.79
SBDSP1-202ENST00000423945 UPF2Q9HAU5 1272 aaKnown RBP20.01■□□□□ 0.79
SBDSP1-202ENST00000423945 SPTBN5Q9NRC6 3674 aaKnown RBP20■□□□□ 0.79
SBDSP1-202ENST00000423945 MARCH6O60337 910 aa20■□□□□ 0.79
SBDSP1-202ENST00000423945 DGKIO75912 1065 aa20■□□□□ 0.79
SBDSP1-202ENST00000423945 ATP2B1P20020 1258 aa20■□□□□ 0.79
SBDSP1-202ENST00000423945 TMOD1P28289 359 aa20■□□□□ 0.79
SBDSP1-202ENST00000423945 CTTNQ14247 550 aaKnown RBP20■□□□□ 0.79
SBDSP1-202ENST00000423945 DSC3Q14574 896 aa20■□□□□ 0.79
SBDSP1-202ENST00000423945 C4orf19Q8IY42 314 aa20■□□□□ 0.79
SBDSP1-202ENST00000423945 TTC12Q9H892 705 aaPredicted RBP20■□□□□ 0.79
SBDSP1-202ENST00000423945 PCDHA12Q9UN75 941 aa20■□□□□ 0.79
SBDSP1-202ENST00000423945 ATG2AQ2TAZ0 1938 aa20■□□□□ 0.79
SBDSP1-202ENST00000423945 ADGRA3Q8IWK6 1321 aa20■□□□□ 0.79
SBDSP1-202ENST00000423945 FNDC1Q4ZHG4 1894 aaPredicted RBP19.99■□□□□ 0.79
SBDSP1-202ENST00000423945 SLITRK3O94933 977 aa19.99■□□□□ 0.79
SBDSP1-202ENST00000423945 MCM7P33993 719 aa19.99■□□□□ 0.79
SBDSP1-202ENST00000423945 TXKP42681 527 aa19.99■□□□□ 0.79
SBDSP1-202ENST00000423945 CYP4A11Q02928 519 aa19.99■□□□□ 0.79
SBDSP1-202ENST00000423945 NPAS4Q8IUM7 802 aa19.99■□□□□ 0.79
SBDSP1-202ENST00000423945 ADAM2Q99965 735 aa19.99■□□□□ 0.79
SBDSP1-202ENST00000423945 HSD17B14Q9BPX1 270 aa19.99■□□□□ 0.79
SBDSP1-202ENST00000423945 EIF2AK1Q9BQI3 630 aaKnown RBP19.99■□□□□ 0.79
SBDSP1-202ENST00000423945 CYP26B1Q9NR63 512 aa19.99■□□□□ 0.79
SBDSP1-202ENST00000423945 RGS18Q9NS28 235 aa19.99■□□□□ 0.79
SBDSP1-202ENST00000423945 VCANP13611 3396 aa19.98■□□□□ 0.79
SBDSP1-202ENST00000423945 C9IYK1 514 aa19.98■□□□□ 0.79
SBDSP1-202ENST00000423945 GPR182O15218 404 aa19.98■□□□□ 0.79
SBDSP1-202ENST00000423945 DARSP14868 501 aaKnown RBP19.98■□□□□ 0.79
SBDSP1-202ENST00000423945 U2AF2P26368 475 aaKnown RBP eCLIP19.98■□□□□ 0.79
SBDSP1-202ENST00000423945 GATMP50440 423 aa19.98■□□□□ 0.79
SBDSP1-202ENST00000423945 EPC2Q52LR7 807 aa19.98■□□□□ 0.79
SBDSP1-202ENST00000423945 NOSTRINQ8IVI9 506 aa19.98■□□□□ 0.79
SBDSP1-202ENST00000423945 MICALL1Q8N3F8 863 aa19.98■□□□□ 0.79
SBDSP1-202ENST00000423945 POTEMA6NI47 508 aa19.97■□□□□ 0.79
SBDSP1-202ENST00000423945 DKC1O60832 514 aaKnown RBP eCLIP19.97■□□□□ 0.79
SBDSP1-202ENST00000423945 CSDE1O75534 798 aaKnown RBP19.97■□□□□ 0.79
SBDSP1-202ENST00000423945 FGFR4P22455 802 aa19.97■□□□□ 0.79
SBDSP1-202ENST00000423945 EIF4BP23588 611 aaKnown RBP19.97■□□□□ 0.79
SBDSP1-202ENST00000423945 YWHABP31946 246 aaKnown RBP19.97■□□□□ 0.79
SBDSP1-202ENST00000423945 SARSP49591 514 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms