RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 C22orf31O95567 290 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 RAG1P15918 1043 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 MUTP22033 750 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 CYP2C18P33260 490 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 THPOP40225 353 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 RARRES1P49788 294 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 TBC1D8BQ0IIM8 1120 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 GRB10Q13322 594 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 BFSP2Q13515 415 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 KARSQ15046 597 aaKnown RBP10.35□□□□□ -0.75
PDGFC-202ENST00000422544 TRIM71Q2Q1W2 868 aaKnown RBP10.35□□□□□ -0.75
PDGFC-202ENST00000422544 LRIT3Q3SXY7 679 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 AXDND1Q5T1B0 1012 aaPredicted RBP10.35□□□□□ -0.75
PDGFC-202ENST00000422544 KCNK18Q7Z418 384 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 METTL13Q8N6R0 699 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 RETREG2Q8NC44 543 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 DNAJB3Q8WWF6 145 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 SYMPKQ92797 1274 aaKnown RBP10.35□□□□□ -0.75
PDGFC-202ENST00000422544 CDK5RAP3Q96JB5 506 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 SPATA32Q96LK8 384 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 CCSER1Q9C0I3 900 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 SCAND2PQ9GZW5 306 aaPredicted RBP10.35□□□□□ -0.75
PDGFC-202ENST00000422544 FAM49AQ9H0Q0 323 aaPredicted RBP10.35□□□□□ -0.75
PDGFC-202ENST00000422544 SUGCTQ9HAC7 445 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 GDPD2Q9HCC8 539 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 ANKEF1Q9NU02 776 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 DNM3Q9UQ16 869 aa10.35□□□□□ -0.75
PDGFC-202ENST00000422544 TRANK1O15050 2925 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 SMIM35A0A1B0GVV1 85 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 E9PMD0 336 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 RBAK-RBAKDNI3L0D1 243 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 MAFO75444 373 aaPredicted RBP10.34□□□□□ -0.75
PDGFC-202ENST00000422544 TIMP1P01033 207 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 CKBP12277 381 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 MAGEA10P43363 369 aaPredicted RBP10.34□□□□□ -0.75
PDGFC-202ENST00000422544 CCL23P55773 120 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 TPRNQ4KMQ1 711 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 HYIQ5T013 277 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 ZNF618Q5T7W0 954 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 EFCAB12Q6NXP0 572 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 TAF2Q6P1X5 1199 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 SHC4Q6S5L8 630 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 KIAA0319LQ8IZA0 1049 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 LRRC71Q8N4P6 559 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 RASSF8Q8NHQ8 419 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 CAGE1Q8TC20 777 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 BADQ92934 168 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 CALML4Q96GE6 196 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 PANK2Q9BZ23 570 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 BHMT2Q9H2M3 363 aa10.34□□□□□ -0.75
PDGFC-202ENST00000422544 BMP2KQ9NSY1 1161 aaPredicted RBP10.34□□□□□ -0.75
PDGFC-202ENST00000422544 DBR1Q9UK59 544 aaKnown RBP10.34□□□□□ -0.75
PDGFC-202ENST00000422544 KDM3AQ9Y4C1 1321 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 IGKV6-21A0A0C4DH24 114 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 ARHGEF35A5YM69 484 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 PITPNM1O00562 1244 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 SLC26A4O43511 780 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 CTSHP09668 335 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 IQCF3P0C7M6 154 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 SELPP16109 830 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 TMOD1P28289 359 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 RFC5P40937 340 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 CLCN3P51790 818 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 POLGP54098 1239 aaPredicted RBP10.33□□□□□ -0.76
PDGFC-202ENST00000422544 MDM2Q00987 491 aaPredicted RBP10.33□□□□□ -0.76
PDGFC-202ENST00000422544 TMEM62Q0P6H9 643 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 DRP2Q13474 957 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 TMEM119Q4V9L6 283 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 PADI6Q6TGC4 694 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 RPAINQ86UA6 219 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 RSPH3Q86UC2 560 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 NME8Q8N427 588 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 CCDC155Q8N6L0 562 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 LRRC15Q8TF66 581 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 SLC7A3Q8WY07 619 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 TMEM143Q96AN5 459 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 SCLYQ96I15 445 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 CCDC43Q96MW1 224 aaKnown RBP10.33□□□□□ -0.76
PDGFC-202ENST00000422544 NT5C3AQ9H0P0 336 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 WNT8AQ9H1J5 351 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 DHX33Q9H6R0 707 aaKnown RBP10.33□□□□□ -0.76
PDGFC-202ENST00000422544 PPME1Q9Y570 386 aa10.33□□□□□ -0.76
PDGFC-202ENST00000422544 A0A087X0B3 334 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 RSPH10B2B2RC85 870 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 USO1O60763 962 aaKnown RBP10.32□□□□□ -0.76
PDGFC-202ENST00000422544 DGAT1O75907 488 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 EYA4O95677 639 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 CHRNA1P02708 482 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 VTNP04004 478 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 SSBP05455 408 aaKnown RBP eCLIP10.32□□□□□ -0.76
PDGFC-202ENST00000422544 PLA2G4BP0C869 781 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 RSPH10BP0C881 870 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 PLCG1P19174 1290 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 TXLNAP40222 546 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 DNM2P50570 870 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 RBL2Q08999 1139 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 EMC2Q15006 297 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 RRAGBQ5VZM2 374 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 MFSD5Q6N075 450 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 TRAF7Q6Q0C0 670 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms