RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 SP4Q02446 784 aa13.84□□□□□ -0.19
UFD1-203ENST00000421968 SNW1Q13573 536 aaKnown RBP13.84□□□□□ -0.19
UFD1-203ENST00000421968 AASDHQ4L235 1098 aaPredicted RBP13.84□□□□□ -0.19
UFD1-203ENST00000421968 APPBP2Q92624 585 aa13.84□□□□□ -0.19
UFD1-203ENST00000421968 STAMQ92783 540 aa13.84□□□□□ -0.19
UFD1-203ENST00000421968 MAP4K1Q92918 833 aa13.84□□□□□ -0.19
UFD1-203ENST00000421968 MYADMQ96S97 322 aa13.84□□□□□ -0.19
UFD1-203ENST00000421968 ANKFY1Q9P2R3 1169 aa13.84□□□□□ -0.19
UFD1-203ENST00000421968 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.84□□□□□ -0.19
UFD1-203ENST00000421968 MRPL11Q9Y3B7 192 aaKnown RBP13.84□□□□□ -0.19
UFD1-203ENST00000421968 SDK1Q7Z5N4 2213 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 C9IYK1 514 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 KCNK5O95279 499 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 LIMK1P53667 647 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 IGBP1P78318 339 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 NEDD9Q14511 834 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 PGM5Q15124 567 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 CDC37Q16543 378 aaPredicted RBP13.83□□□□□ -0.2
UFD1-203ENST00000421968 MARCH8Q5T0T0 291 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 C15orf39Q6ZRI6 1047 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 PPFIBP1Q86W92 1011 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 VPS52Q8N1B4 723 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 SLC39A11Q8N1S5 342 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 IL31RAQ8NI17 732 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 ZBTB10Q96DT7 871 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 TMEM121BQ9BXQ6 578 aaPredicted RBP13.83□□□□□ -0.2
UFD1-203ENST00000421968 ADAM33Q9BZ11 813 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 CELF4Q9BZC1 486 aaKnown RBP13.83□□□□□ -0.2
UFD1-203ENST00000421968 OSBPL6Q9BZF3 934 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 UBA5Q9GZZ9 404 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 TMEM117Q9H0C3 514 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 NAPBQ9H115 298 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 CPVLQ9H3G5 476 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 RGS18Q9NS28 235 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 IGSF5Q9NSI5 407 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 TMEM161AQ9NX61 479 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 TELO2Q9Y4R8 837 aa13.83□□□□□ -0.2
UFD1-203ENST00000421968 SMG1Q96Q15 3661 aaKnown RBP13.82□□□□□ -0.2
UFD1-203ENST00000421968 SPINK2P20155 84 aa13.82□□□□□ -0.2
UFD1-203ENST00000421968 MARK3P27448 753 aa13.82□□□□□ -0.2
UFD1-203ENST00000421968 CCND2P30279 289 aa13.82□□□□□ -0.2
UFD1-203ENST00000421968 FOXC1Q12948 553 aa13.82□□□□□ -0.2
UFD1-203ENST00000421968 LRRC43Q8N309 656 aa13.82□□□□□ -0.2
UFD1-203ENST00000421968 BBXQ8WY36 941 aaPredicted RBP13.82□□□□□ -0.2
UFD1-203ENST00000421968 KIF1BPQ96EK5 621 aa13.82□□□□□ -0.2
UFD1-203ENST00000421968 PRMT8Q9NR22 394 aaPredicted RBP13.82□□□□□ -0.2
UFD1-203ENST00000421968 AKAP13Q12802 2813 aa13.82□□□□□ -0.2
UFD1-203ENST00000421968 GOLGA8HP0CJ92 632 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 METAP2P50579 478 aaKnown RBP eCLIP13.81□□□□□ -0.2
UFD1-203ENST00000421968 NRLP54845 237 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 GPC5P78333 572 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 CTDSPL2Q05D32 466 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 GIT2Q14161 759 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 MLF2Q15773 248 aaPredicted RBP13.81□□□□□ -0.2
UFD1-203ENST00000421968 ZBTB41Q5SVQ8 909 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 PSAPL1Q6NUJ1 521 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 CEP85Q6P2H3 762 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 ABI1Q8IZP0 508 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 ST13P5Q8NFI4 369 aaPredicted RBP13.81□□□□□ -0.2
UFD1-203ENST00000421968 TMEM169Q96HH4 297 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 CASD1Q96PB1 797 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 DDX23Q9BUQ8 820 aaKnown RBP13.81□□□□□ -0.2
UFD1-203ENST00000421968 ZBP1Q9H171 429 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 WDR6Q9NNW5 1121 aaKnown RBP13.81□□□□□ -0.2
UFD1-203ENST00000421968 PCDHA1Q9Y5I3 950 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 IRAK3Q9Y616 596 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 MYH6P13533 1939 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 COL4A3Q01955 1670 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 DMXL2Q8TDJ6 3036 aa13.81□□□□□ -0.2
UFD1-203ENST00000421968 NT5C1B-RDH14C9J2C7 533 aa13.8□□□□□ -0.2
UFD1-203ENST00000421968 M0R2C6 588 aa13.8□□□□□ -0.2
UFD1-203ENST00000421968 CD72P21854 359 aa13.8□□□□□ -0.2
UFD1-203ENST00000421968 HSD17B4P51659 736 aa13.8□□□□□ -0.2
UFD1-203ENST00000421968 PRKCQQ04759 706 aa13.8□□□□□ -0.2
UFD1-203ENST00000421968 SIM2Q14190 667 aaPredicted RBP13.8□□□□□ -0.2
UFD1-203ENST00000421968 GNPTABQ3T906 1256 aa13.8□□□□□ -0.2
UFD1-203ENST00000421968 STOX1Q6ZVD7 989 aa13.8□□□□□ -0.2
UFD1-203ENST00000421968 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.8□□□□□ -0.2
UFD1-203ENST00000421968 LTB4R2Q9NPC1 389 aa13.8□□□□□ -0.2
UFD1-203ENST00000421968 GINS2Q9Y248 185 aa13.8□□□□□ -0.2
UFD1-203ENST00000421968 NUMBLQ9Y6R0 609 aa13.8□□□□□ -0.2
UFD1-203ENST00000421968 CLUHO75153 1309 aa13.8□□□□□ -0.2
UFD1-203ENST00000421968 ADAMTS20P59510 1910 aa13.8□□□□□ -0.2
UFD1-203ENST00000421968 HOXA2O43364 376 aa13.79□□□□□ -0.2
UFD1-203ENST00000421968 RPS6KA5O75582 802 aa13.79□□□□□ -0.2
UFD1-203ENST00000421968 CTSAP10619 480 aa13.79□□□□□ -0.2
UFD1-203ENST00000421968 LAMP2P13473 410 aa13.79□□□□□ -0.2
UFD1-203ENST00000421968 KLRC2P26717 231 aa13.79□□□□□ -0.2
UFD1-203ENST00000421968 TCF7P36402 384 aaPredicted RBP13.79□□□□□ -0.2
UFD1-203ENST00000421968 KRT76Q01546 638 aa13.79□□□□□ -0.2
UFD1-203ENST00000421968 HTR4Q13639 388 aa13.79□□□□□ -0.2
UFD1-203ENST00000421968 SLC44A4Q53GD3 710 aa13.79□□□□□ -0.2
UFD1-203ENST00000421968 GPATCH4Q5T3I0 446 aaKnown RBP13.79□□□□□ -0.2
UFD1-203ENST00000421968 FAM43BQ6ZT52 329 aaPredicted RBP13.79□□□□□ -0.2
UFD1-203ENST00000421968 TRMT2AQ8IZ69 625 aaKnown RBP13.79□□□□□ -0.2
UFD1-203ENST00000421968 GATA6Q92908 595 aa13.79□□□□□ -0.2
UFD1-203ENST00000421968 ELAC1Q9H777 363 aaKnown RBP13.79□□□□□ -0.2
UFD1-203ENST00000421968 ERAP1Q9NZ08 941 aa13.79□□□□□ -0.2
UFD1-203ENST00000421968 LAMA4Q16363 1823 aa13.78□□□□□ -0.2
UFD1-203ENST00000421968 EIF4E1BA6NMX2 242 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms