RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 SOX10P56693 466 aa6.69□□□□□ -1.34
SFXN1-202ENST00000421887 SOGA3Q5TF21 947 aa6.69□□□□□ -1.34
SFXN1-202ENST00000421887 CYP4F22Q6NT55 531 aa6.69□□□□□ -1.34
SFXN1-202ENST00000421887 ZC3H18Q86VM9 953 aaKnown RBP6.69□□□□□ -1.34
SFXN1-202ENST00000421887 DNERQ8NFT8 737 aa6.69□□□□□ -1.34
SFXN1-202ENST00000421887 NKD1Q969G9 470 aa6.69□□□□□ -1.34
SFXN1-202ENST00000421887 THSD7BQ9C0I4 1608 aa6.68□□□□□ -1.34
SFXN1-202ENST00000421887 ERVV-2B6SEH9 535 aa6.68□□□□□ -1.34
SFXN1-202ENST00000421887 NPIPB8E9PQR5 432 aa6.68□□□□□ -1.34
SFXN1-202ENST00000421887 PPM1GO15355 546 aaPredicted RBP6.68□□□□□ -1.34
SFXN1-202ENST00000421887 SERPINB2P05120 415 aa6.68□□□□□ -1.34
SFXN1-202ENST00000421887 SEPHS1P49903 392 aa6.68□□□□□ -1.34
SFXN1-202ENST00000421887 SELENOPP49908 381 aa6.68□□□□□ -1.34
SFXN1-202ENST00000421887 DPY19L1Q2PZI1 675 aa6.68□□□□□ -1.34
SFXN1-202ENST00000421887 PRR31Q5SQ13 230 aa6.68□□□□□ -1.34
SFXN1-202ENST00000421887 MCMBPQ9BTE3 642 aa6.68□□□□□ -1.34
SFXN1-202ENST00000421887 DDX21Q9NR30 783 aaKnown RBP eCLIP6.68□□□□□ -1.34
SFXN1-202ENST00000421887 ADAMTS1Q9UHI8 967 aa6.68□□□□□ -1.34
SFXN1-202ENST00000421887 KIF24Q5T7B8 1368 aa6.68□□□□□ -1.34
SFXN1-202ENST00000421887 NRXN2Q9P2S2 1712 aa6.67□□□□□ -1.34
SFXN1-202ENST00000421887 C9orf118A6NHY6 69 aa6.67□□□□□ -1.34
SFXN1-202ENST00000421887 PPP2CBP62714 309 aa6.67□□□□□ -1.34
SFXN1-202ENST00000421887 PPP2CAP67775 309 aa6.67□□□□□ -1.34
SFXN1-202ENST00000421887 TCEAL1Q15170 157 aa6.67□□□□□ -1.34
SFXN1-202ENST00000421887 SMN1Q16637 294 aaKnown RBP6.67□□□□□ -1.34
SFXN1-202ENST00000421887 ARHGEF18Q6ZSZ5 1173 aa6.67□□□□□ -1.34
SFXN1-202ENST00000421887 ADCY4Q8NFM4 1077 aa6.67□□□□□ -1.34
SFXN1-202ENST00000421887 PTPN18Q99952 460 aa6.67□□□□□ -1.34
SFXN1-202ENST00000421887 DIS3Q9Y2L1 958 aaKnown RBP6.67□□□□□ -1.34
SFXN1-202ENST00000421887 AURKAO14965 403 aa6.66□□□□□ -1.34
SFXN1-202ENST00000421887 TNRC18O15417 2968 aaPredicted RBP6.66□□□□□ -1.34
SFXN1-202ENST00000421887 VAMP4O75379 141 aa6.66□□□□□ -1.34
SFXN1-202ENST00000421887 DCP2Q8IU60 420 aaKnown RBP6.66□□□□□ -1.34
SFXN1-202ENST00000421887 WWC2-AS2Q96NR7 200 aa6.66□□□□□ -1.34
SFXN1-202ENST00000421887 PUS7Q96PZ0 661 aaKnown RBP6.66□□□□□ -1.34
SFXN1-202ENST00000421887 AP5M1Q9H0R1 490 aa6.66□□□□□ -1.34
SFXN1-202ENST00000421887 L2HGDHQ9H9P8 463 aa6.66□□□□□ -1.34
SFXN1-202ENST00000421887 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.66□□□□□ -1.34
SFXN1-202ENST00000421887 LTBP1Q14766 1721 aa6.66□□□□□ -1.34
SFXN1-202ENST00000421887 RNF123Q5XPI4 1314 aa6.66□□□□□ -1.34
SFXN1-202ENST00000421887 ADAMTSL1Q8N6G6 1762 aa6.66□□□□□ -1.34
SFXN1-202ENST00000421887 KIF20BQ96Q89 1820 aa6.66□□□□□ -1.34
SFXN1-202ENST00000421887 NPHP3-ACAD11A0A0J9YXS1 232 aa6.65□□□□□ -1.34
SFXN1-202ENST00000421887 ZNF623O75123 536 aa6.65□□□□□ -1.34
SFXN1-202ENST00000421887 CARD11Q9BXL7 1154 aa6.65□□□□□ -1.34
SFXN1-202ENST00000421887 TMEM168Q9H0V1 697 aa6.65□□□□□ -1.34
SFXN1-202ENST00000421887 SEMA4AQ9H3S1 761 aa6.65□□□□□ -1.34
SFXN1-202ENST00000421887 NARFQ9UHQ1 456 aa6.65□□□□□ -1.34
SFXN1-202ENST00000421887 GGT7Q9UJ14 662 aa6.65□□□□□ -1.34
SFXN1-202ENST00000421887 TONSLQ96HA7 1378 aa6.65□□□□□ -1.35
SFXN1-202ENST00000421887 ANKRD26Q9UPS8 1709 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 SLX4Q8IY92 1834 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 AKAP11Q9UKA4 1901 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 ST20-MTHFSA0A0A6YYL1 179 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 C2orf71A6NGG8 1288 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 FYB1O15117 783 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 NPHS1O60500 1241 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 B4GALT4O60513 344 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 PAMP19021 973 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 STAT5AP42229 794 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 MTHFSP49914 203 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 C1orf141Q5JVX7 400 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 MIB1Q86YT6 1006 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 SLITRK4Q8IW52 837 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 KBTBD2Q8IY47 623 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 GPC2Q8N158 579 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 JDP2Q8WYK2 163 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 RNF34Q969K3 372 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 BRIP1Q9BX63 1249 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 COL15A1P39059 1388 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 TJP1Q07157 1748 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 ARFGEF2Q9Y6D5 1785 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 ANKRD31Q8N7Z5 1873 aa6.64□□□□□ -1.35
SFXN1-202ENST00000421887 A0A087WZG4 1122 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 C7orf72A4D263 438 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 PATE3B3GLJ2 98 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 SGSM2O43147 1006 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 COL11A2P13942 1736 aaPredicted RBP6.63□□□□□ -1.35
SFXN1-202ENST00000421887 ZNF28P17035 718 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 INHBEP58166 350 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 ST5P78524 1137 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 TAGLNQ01995 201 aaKnown RBP6.63□□□□□ -1.35
SFXN1-202ENST00000421887 ZYXQ15942 572 aaKnown RBP6.63□□□□□ -1.35
SFXN1-202ENST00000421887 PLEKHO1Q53GL0 409 aaPredicted RBP6.63□□□□□ -1.35
SFXN1-202ENST00000421887 CCDC93Q567U6 631 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 HABP4Q5JVS0 413 aaKnown RBP6.63□□□□□ -1.35
SFXN1-202ENST00000421887 WASHC2AQ641Q2 1341 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 CARMIL3Q8ND23 1372 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 CHFRQ96EP1 664 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 ZSWIM3Q96MP5 696 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 ZNF541Q9H0D2 1346 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 MARCH2Q9P0N8 246 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 ADAMTS7Q9UKP4 1686 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 TESMINQ9Y4I5 508 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 BACE2Q9Y5Z0 518 aa6.63□□□□□ -1.35
SFXN1-202ENST00000421887 NCAPD2Q15021 1401 aa6.62□□□□□ -1.35
SFXN1-202ENST00000421887 SOS1Q07889 1333 aaPredicted RBP6.62□□□□□ -1.35
SFXN1-202ENST00000421887 IL13P35225 146 aa6.62□□□□□ -1.35
SFXN1-202ENST00000421887 EPHB4P54760 987 aa6.62□□□□□ -1.35
SFXN1-202ENST00000421887 EIF6P56537 245 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms