RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 ITGB1P05556 798 aa19.62■□□□□ 0.73
MSH6-203ENST00000420813 SFNP31947 248 aa19.62■□□□□ 0.73
MSH6-203ENST00000420813 SSRP1Q08945 709 aaKnown RBP19.62■□□□□ 0.73
MSH6-203ENST00000420813 FAM228AQ86W67 206 aa19.62■□□□□ 0.73
MSH6-203ENST00000420813 LINC01465Q8N7H1 131 aa19.62■□□□□ 0.73
MSH6-203ENST00000420813 KLHL23Q8NBE8 558 aa19.62■□□□□ 0.73
MSH6-203ENST00000420813 SPPL3Q8TCT6 385 aa19.62■□□□□ 0.73
MSH6-203ENST00000420813 SLC5A5Q92911 643 aa19.62■□□□□ 0.73
MSH6-203ENST00000420813 MAP7D2Q96T17 732 aa19.62■□□□□ 0.73
MSH6-203ENST00000420813 LRFN3Q9BTN0 628 aa19.62■□□□□ 0.73
MSH6-203ENST00000420813 PCDHA4Q9UN74 947 aa19.62■□□□□ 0.73
MSH6-203ENST00000420813 CPLX1O14810 134 aa19.61■□□□□ 0.73
MSH6-203ENST00000420813 ZNF862O60290 1169 aa19.61■□□□□ 0.73
MSH6-203ENST00000420813 GAS7O60861 476 aa19.61■□□□□ 0.73
MSH6-203ENST00000420813 GPR37L1O60883 481 aa19.61■□□□□ 0.73
MSH6-203ENST00000420813 DEXIO95424 95 aa19.61■□□□□ 0.73
MSH6-203ENST00000420813 VTNP04004 478 aa19.61■□□□□ 0.73
MSH6-203ENST00000420813 TMOD1P28289 359 aa19.61■□□□□ 0.73
MSH6-203ENST00000420813 SSTR3P32745 418 aaPredicted RBP19.61■□□□□ 0.73
MSH6-203ENST00000420813 GATMP50440 423 aa19.61■□□□□ 0.73
MSH6-203ENST00000420813 JAK3P52333 1124 aa19.61■□□□□ 0.73
MSH6-203ENST00000420813 TRMT1LQ7Z2T5 733 aaKnown RBP19.61■□□□□ 0.73
MSH6-203ENST00000420813 RDM1Q8NG50 284 aa19.61■□□□□ 0.73
MSH6-203ENST00000420813 TBCKQ8TEA7 893 aa19.61■□□□□ 0.73
MSH6-203ENST00000420813 TEKT3Q9BXF9 490 aa19.61■□□□□ 0.73
MSH6-203ENST00000420813 ELAC1Q9H777 363 aaKnown RBP19.61■□□□□ 0.73
MSH6-203ENST00000420813 NRBP2Q9NSY0 501 aa19.61■□□□□ 0.73
MSH6-203ENST00000420813 TMEM161AQ9NX61 479 aa19.61■□□□□ 0.73
MSH6-203ENST00000420813 RAPGEFL1Q9UHV5 662 aa19.61■□□□□ 0.73
MSH6-203ENST00000420813 DNAJB1P25685 340 aa19.6■□□□□ 0.73
MSH6-203ENST00000420813 CLCN3P51790 818 aa19.6■□□□□ 0.73
MSH6-203ENST00000420813 FAM189BP81408 668 aa19.6■□□□□ 0.73
MSH6-203ENST00000420813 PRKCEQ02156 737 aa19.6■□□□□ 0.73
MSH6-203ENST00000420813 UBE3AQ05086 875 aa19.6■□□□□ 0.73
MSH6-203ENST00000420813 DSC3Q14574 896 aa19.6■□□□□ 0.73
MSH6-203ENST00000420813 Q4G0T1 1027 aa19.6■□□□□ 0.73
MSH6-203ENST00000420813 LRCH2Q5VUJ6 765 aa19.6■□□□□ 0.73
MSH6-203ENST00000420813 GALNT17Q6IS24 598 aa19.6■□□□□ 0.73
MSH6-203ENST00000420813 EFCAB12Q6NXP0 572 aa19.6■□□□□ 0.73
MSH6-203ENST00000420813 CPLX2Q6PUV4 134 aaKnown RBP19.6■□□□□ 0.73
MSH6-203ENST00000420813 DAGLBQ8NCG7 672 aa19.6■□□□□ 0.73
MSH6-203ENST00000420813 POF1BQ8WVV4 589 aa19.6■□□□□ 0.73
MSH6-203ENST00000420813 PPP1R16BQ96T49 567 aa19.6■□□□□ 0.73
MSH6-203ENST00000420813 AAASQ9NRG9 546 aa19.6■□□□□ 0.73
MSH6-203ENST00000420813 PCDHB12Q9Y5F1 795 aa19.6■□□□□ 0.73
MSH6-203ENST00000420813 CYP3A7-CYP3A51PA0A087WV96 503 aa19.59■□□□□ 0.73
MSH6-203ENST00000420813 M0R2N6 131 aa19.59■□□□□ 0.73
MSH6-203ENST00000420813 CYP3A7P24462 503 aa19.59■□□□□ 0.73
MSH6-203ENST00000420813 ZP2Q05996 745 aa19.59■□□□□ 0.73
MSH6-203ENST00000420813 DLX2Q07687 328 aaPredicted RBP19.59■□□□□ 0.73
MSH6-203ENST00000420813 MOXD1Q6UVY6 613 aa19.59■□□□□ 0.73
MSH6-203ENST00000420813 BLIDQ8IZY5 108 aa19.59■□□□□ 0.73
MSH6-203ENST00000420813 UNC45AQ9H3U1 944 aa19.59■□□□□ 0.73
MSH6-203ENST00000420813 ATP6V0A4Q9HBG4 840 aa19.59■□□□□ 0.73
MSH6-203ENST00000420813 C11orf16Q9NQ32 467 aa19.59■□□□□ 0.73
MSH6-203ENST00000420813 AKT3Q9Y243 479 aa19.59■□□□□ 0.73
MSH6-203ENST00000420813 ARIH1Q9Y4X5 557 aaPredicted RBP19.59■□□□□ 0.73
MSH6-203ENST00000420813 C5orf42Q9H799 3197 aa19.58■□□□□ 0.73
MSH6-203ENST00000420813 TBKBP1A7MCY6 615 aa19.58■□□□□ 0.72
MSH6-203ENST00000420813 TBX10O75333 385 aa19.58■□□□□ 0.72
MSH6-203ENST00000420813 PSMD10O75832 226 aa19.58■□□□□ 0.72
MSH6-203ENST00000420813 ALADP13716 330 aa19.58■□□□□ 0.72
MSH6-203ENST00000420813 EIF4BP23588 611 aaKnown RBP19.58■□□□□ 0.72
MSH6-203ENST00000420813 GTF2F1P35269 517 aaKnown RBP eCLIP19.58■□□□□ 0.722e-7■■■■■ 28.4
MSH6-203ENST00000420813 NLRP11P59045 1033 aaKnown RBP19.58■□□□□ 0.72
MSH6-203ENST00000420813 ADAM15Q13444 863 aa19.58■□□□□ 0.72
MSH6-203ENST00000420813 SMAD2Q15796 467 aaKnown RBP19.58■□□□□ 0.72
MSH6-203ENST00000420813 UGCGQ16739 394 aa19.58■□□□□ 0.72
MSH6-203ENST00000420813 CSPP1Q1MSJ5 1256 aa19.58■□□□□ 0.72
MSH6-203ENST00000420813 FAM102BQ5T8I3 360 aa19.58■□□□□ 0.72
MSH6-203ENST00000420813 ADHFE1Q8IWW8 467 aa19.58■□□□□ 0.72
MSH6-203ENST00000420813 MBOAT7Q96N66 472 aa19.58■□□□□ 0.72
MSH6-203ENST00000420813 ADAMTS10Q9H324 1103 aa19.58■□□□□ 0.72
MSH6-203ENST00000420813 C19orf67A6NJJ6 358 aa19.57■□□□□ 0.72
MSH6-203ENST00000420813 HOXA2O43364 376 aa19.57■□□□□ 0.72
MSH6-203ENST00000420813 MBTPS2O43462 519 aa19.57■□□□□ 0.72
MSH6-203ENST00000420813 CHMP2AO43633 222 aa19.57■□□□□ 0.72
MSH6-203ENST00000420813 CSPG5O95196 566 aa19.57■□□□□ 0.72
MSH6-203ENST00000420813 IBSPP21815 317 aaPredicted RBP19.57■□□□□ 0.72
MSH6-203ENST00000420813 IRS1P35568 1242 aa19.57■□□□□ 0.72
MSH6-203ENST00000420813 SMAD4Q13485 552 aaKnown RBP19.57■□□□□ 0.72
MSH6-203ENST00000420813 TARBP2Q15633 366 aaKnown RBP19.57■□□□□ 0.72
MSH6-203ENST00000420813 NPY5RQ15761 445 aa19.57■□□□□ 0.72
MSH6-203ENST00000420813 SPOUT1Q5T280 376 aaKnown RBP19.57■□□□□ 0.72
MSH6-203ENST00000420813 B3GNT9Q6UX72 402 aa19.57■□□□□ 0.72
MSH6-203ENST00000420813 LRRC71Q8N4P6 559 aa19.57■□□□□ 0.72
MSH6-203ENST00000420813 EFHBQ8N7U6 833 aa19.57■□□□□ 0.72
MSH6-203ENST00000420813 UPF3BQ9BZI7 483 aaKnown RBP19.57■□□□□ 0.72
MSH6-203ENST00000420813 IGFLR1Q9H665 355 aa19.57■□□□□ 0.72
MSH6-203ENST00000420813 CD207Q9UJ71 328 aa19.57■□□□□ 0.72
MSH6-203ENST00000420813 HCN4Q9Y3Q4 1203 aa19.57■□□□□ 0.72
MSH6-203ENST00000420813 LINC01565O15544 149 aa19.56■□□□□ 0.72
MSH6-203ENST00000420813 TDP2O95551 362 aa19.56■□□□□ 0.72
MSH6-203ENST00000420813 ZSCAN20P17040 1043 aaPredicted RBP19.56■□□□□ 0.72
MSH6-203ENST00000420813 NDUFV1P49821 464 aa19.56■□□□□ 0.72
MSH6-203ENST00000420813 GPC3P51654 580 aa19.56■□□□□ 0.72
MSH6-203ENST00000420813 TBC1D8BQ0IIM8 1120 aa19.56■□□□□ 0.72
MSH6-203ENST00000420813 MIER3Q7Z3K6 550 aa19.56■□□□□ 0.72
MSH6-203ENST00000420813 ADGRD2Q7Z7M1 963 aa19.56■□□□□ 0.72
MSH6-203ENST00000420813 POP1Q99575 1024 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms