RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 RMDN3Q96TC7 470 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 WNT8AQ9H1J5 351 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 IPO5O00410 1097 aaKnown RBP15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 LRRN2O75325 713 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 NEDD9Q14511 834 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 TRIM50Q86XT4 487 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 STRIP2Q9ULQ0 834 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 CALB1P05937 261 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 CHRNA3P32297 505 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 VAMP7P51809 220 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 NT5DC1Q5TFE4 455 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 CDKL2Q92772 493 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 L2HGDHQ9H9P8 463 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 NOD1Q9Y239 953 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 A0A087WUV0 522 aaPredicted RBP15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 NR1D1P20393 614 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 SLC18A3Q16572 532 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 PTPN21Q16825 1174 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 KCNV1Q6PIU1 500 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 RDM1Q8NG50 284 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 MCUR1Q96AQ8 359 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 RIT2Q99578 217 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 POLR3CQ9BUI4 534 aaPredicted RBP15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 INTS2Q9H0H0 1204 aaKnown RBP15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 PCIF1Q9H4Z3 704 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 MAP3K20Q9NYL2 800 aaKnown RBP15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 ANAPC5Q9UJX4 755 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 INTUQ9ULD6 942 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 SNX12Q9UMY4 172 aa15.96■□□□□ 0.15
AP000550.1-201ENST00000420508 AK9Q5TCS8 1911 aa15.96■□□□□ 0.14
AP000550.1-201ENST00000420508 PP2D1A8MPX8 630 aa15.96■□□□□ 0.14
AP000550.1-201ENST00000420508 IFNB1P01574 187 aa15.96■□□□□ 0.14
AP000550.1-201ENST00000420508 EIF2AK2P19525 551 aaKnown RBP15.96■□□□□ 0.14
AP000550.1-201ENST00000420508 SOX5P35711 763 aa15.96■□□□□ 0.14
AP000550.1-201ENST00000420508 DHX34Q14147 1143 aaKnown RBP15.96■□□□□ 0.14
AP000550.1-201ENST00000420508 TUBB6Q9BUF5 446 aa15.96■□□□□ 0.14
AP000550.1-201ENST00000420508 ST7Q9NRC1 585 aa15.95■□□□□ 0.14
AP000550.1-201ENST00000420508 CD2APQ9Y5K6 639 aa15.95■□□□□ 0.14
AP000550.1-201ENST00000420508 POTEFA5A3E0 1075 aa15.95■□□□□ 0.14
AP000550.1-201ENST00000420508 POTEIP0CG38 1075 aa15.95■□□□□ 0.14
AP000550.1-201ENST00000420508 GARSP41250 739 aaKnown RBP15.95■□□□□ 0.14
AP000550.1-201ENST00000420508 PEX3P56589 373 aa15.95■□□□□ 0.14
AP000550.1-201ENST00000420508 IRX4P78413 519 aa15.95■□□□□ 0.14
AP000550.1-201ENST00000420508 MAP3K21Q5TCX8 1036 aa15.95■□□□□ 0.14
AP000550.1-201ENST00000420508 POTEGQ6S5H5 508 aa15.95■□□□□ 0.14
AP000550.1-201ENST00000420508 POTEEQ6S8J3 1075 aa15.95■□□□□ 0.14
AP000550.1-201ENST00000420508 RPA1P27694 616 aa15.95■□□□□ 0.14
AP000550.1-201ENST00000420508 FAM182BQ5T319 152 aa15.95■□□□□ 0.14
AP000550.1-201ENST00000420508 MSTO1Q9BUK6 570 aa15.95■□□□□ 0.14
AP000550.1-201ENST00000420508 KCND1Q9NSA2 647 aa15.95■□□□□ 0.14
AP000550.1-201ENST00000420508 MAFGO15525 162 aa15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 TAP1Q03518 808 aa15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 MYO1EQ12965 1108 aa15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 FAM151AQ8WW52 585 aa15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 SENP2Q9HC62 589 aa15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 A6NJR5 290 aa15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 MCF2LO15068 1137 aa15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 ATP1A2P50993 1020 aa15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 CDC42EP5Q6NZY7 148 aa15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 LXNQ9BS40 222 aa15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 FCER1AP12319 257 aa15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 MTERF2Q49AM1 385 aa15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 PCGF5Q86SE9 256 aa15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 HNRNPLLQ8WVV9 542 aaKnown RBP15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 FAM205CA6NFA0 338 aa15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 SYDE1Q6ZW31 735 aaPredicted RBP15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 STK33Q9BYT3 514 aa15.94■□□□□ 0.14
AP000550.1-201ENST00000420508 KRT1P04264 644 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 PLTPP55058 493 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 BZW1Q7L1Q6 419 aaKnown RBP15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 VPS52Q8N1B4 723 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 VGLL2Q8N8G2 317 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 TMEM35BQ8NCS4 154 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 TTC25Q96NG3 672 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 CPVLQ9H3G5 476 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 ST3GAL1Q11201 340 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 RSPH3Q86UC2 560 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 LRRC8CQ8TDW0 803 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 PIGOQ8TEQ8 1089 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 PPP4R1Q8TF05 950 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 FAM129AQ9BZQ8 928 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 C21orf2O43822 256 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 TJP3O95049 919 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 FGGP02679 453 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 IL1R1P14778 569 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 GFPT1Q06210 699 aaPredicted RBP15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 C15orf52Q6ZUT6 534 aaKnown RBP15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 MMS19Q96T76 1030 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 ACAD9Q9H845 621 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 JMJD4Q9H9V9 463 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 RNF146Q9NTX7 359 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 NDUFB10O96000 172 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 COG1Q8WTW3 980 aa15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 TAF1DQ9H5J8 278 aaPredicted RBP15.93■□□□□ 0.14
AP000550.1-201ENST00000420508 RPF1Q9H9Y2 349 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms