RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 HLA-CQ95604 372 aa12.47□□□□□ -0.41
SSBP3-206ENST00000420121 NECAB3Q96P71 396 aaPredicted RBP12.47□□□□□ -0.41
SSBP3-206ENST00000420121 TEKT3Q9BXF9 490 aa12.47□□□□□ -0.41
SSBP3-206ENST00000420121 SLKQ9H2G2 1235 aaPredicted RBP12.47□□□□□ -0.41
SSBP3-206ENST00000420121 SAMM50Q9Y512 469 aa12.47□□□□□ -0.41
SSBP3-206ENST00000420121 FAM205CA6NFA0 338 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 TNFRSF10AO00220 468 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 CHMP2AO43633 222 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 SFNP31947 248 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 BMPR1AP36894 532 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 GATMP50440 423 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 JAK3P52333 1124 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 DSC3Q14574 896 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 COL19A1Q14993 1142 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 NONOQ15233 471 aaKnown RBP eCLIP12.46□□□□□ -0.41
SSBP3-206ENST00000420121 KRT25Q7Z3Z0 450 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 NPAS4Q8IUM7 802 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 LRRC71Q8N4P6 559 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 NECAB1Q8N987 351 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 RDM1Q8NG50 284 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 TNFRSF25Q93038 417 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 GTF3C6Q969F1 213 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 FAM167AQ96KS9 214 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 PPP1R16BQ96T49 567 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 UHRF1Q96T88 793 aaPredicted RBP12.46□□□□□ -0.41
SSBP3-206ENST00000420121 OSMRQ99650 979 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 ADAMTS10Q9H324 1103 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 KCNMB3Q9NPA1 279 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 ST3GAL5Q9UNP4 418 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 GINS2Q9Y248 185 aa12.46□□□□□ -0.41
SSBP3-206ENST00000420121 MRPL42Q9Y6G3 142 aaKnown RBP12.46□□□□□ -0.41
SSBP3-206ENST00000420121 TMEM150BA6NC51 233 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 C9IYK1 514 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 EML1O00423 815 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 GRM6O15303 877 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 MAGEB2O15479 319 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 RPS6KA5O75582 802 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 CDKL5O76039 1030 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 RB1P06400 928 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 CTNNB1P35222 781 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 CRYBB1P53674 252 aaPredicted RBP12.45□□□□□ -0.42
SSBP3-206ENST00000420121 NFX1Q12986 1120 aaKnown RBP12.45□□□□□ -0.42
SSBP3-206ENST00000420121 DRP2Q13474 957 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 CAMK1Q14012 370 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 BTG3Q14201 252 aaPredicted RBP12.45□□□□□ -0.42
SSBP3-206ENST00000420121 EFCAB12Q6NXP0 572 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 MIER3Q7Z3K6 550 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 CMTR2Q8IYT2 770 aaKnown RBP12.45□□□□□ -0.42
SSBP3-206ENST00000420121 METTL13Q8N6R0 699 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 HAS1Q92839 578 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 UBE2ZQ9H832 354 aaPredicted RBP12.45□□□□□ -0.42
SSBP3-206ENST00000420121 RGS18Q9NS28 235 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 ORC3Q9UBD5 711 aaPredicted RBP12.45□□□□□ -0.42
SSBP3-206ENST00000420121 DDX25Q9UHL0 483 aaKnown RBP12.45□□□□□ -0.42
SSBP3-206ENST00000420121 TCEAL9Q9UHQ7 104 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 VAV3Q9UKW4 847 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 CEP131Q9UPN4 1083 aa12.45□□□□□ -0.42
SSBP3-206ENST00000420121 IGKV6-21A0A0C4DH24 114 aa12.44□□□□□ -0.42
SSBP3-206ENST00000420121 SARSP49591 514 aaKnown RBP12.44□□□□□ -0.42
SSBP3-206ENST00000420121 NLRP11P59045 1033 aaKnown RBP12.44□□□□□ -0.42
SSBP3-206ENST00000420121 ANKRD1Q15327 319 aa12.44□□□□□ -0.42
SSBP3-206ENST00000420121 AAK1Q2M2I8 961 aa12.44□□□□□ -0.42
SSBP3-206ENST00000420121 LETM2Q2VYF4 491 aa12.44□□□□□ -0.42
SSBP3-206ENST00000420121 PPP4R3AQ6IN85 833 aa12.44□□□□□ -0.42
SSBP3-206ENST00000420121 NEK8Q86SG6 692 aa12.44□□□□□ -0.42
SSBP3-206ENST00000420121 BANK1Q8NDB2 785 aa12.44□□□□□ -0.42
SSBP3-206ENST00000420121 NSUN7Q8NE18 718 aaKnown RBP12.44□□□□□ -0.42
SSBP3-206ENST00000420121 ADAM2Q99965 735 aa12.44□□□□□ -0.42
SSBP3-206ENST00000420121 NIFKQ9BYG3 293 aaKnown RBP12.44□□□□□ -0.42
SSBP3-206ENST00000420121 C5orf42Q9H799 3197 aa12.44□□□□□ -0.42
SSBP3-206ENST00000420121 CCDC194A0A1B0GVG4 234 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 WNT7AO00755 349 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 GPR182O15218 404 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 JAK2O60674 1132 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 STAG3L1P0CL83 205 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 DNAJB1P25685 340 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 GPC3P51654 580 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 FAM189BP81408 668 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 SPIRE1Q08AE8 756 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 NR5A1Q13285 461 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 PPP2R5CQ13362 524 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 PTPROQ16827 1216 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 PAN2Q504Q3 1202 aaKnown RBP12.43□□□□□ -0.42
SSBP3-206ENST00000420121 TIGD5Q53EQ6 642 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 XKR3Q5GH77 459 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 TCEAL5Q5H9L2 206 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 FAM43BQ6ZT52 329 aaPredicted RBP12.43□□□□□ -0.42
SSBP3-206ENST00000420121 PIK3AP1Q6ZUJ8 805 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 ANO5Q75V66 913 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.43□□□□□ -0.42
SSBP3-206ENST00000420121 ZNF668Q96K58 619 aaPredicted RBP12.43□□□□□ -0.42
SSBP3-206ENST00000420121 SH2D3AQ9BRG2 576 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 NRBP2Q9NSY0 501 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 RNF19AQ9NV58 838 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 WRAP73Q9P2S5 460 aaPredicted RBP12.43□□□□□ -0.42
SSBP3-206ENST00000420121 HCSTQ9UBK5 93 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 RWDD3Q9Y3V2 267 aa12.43□□□□□ -0.42
SSBP3-206ENST00000420121 ITGB1P05556 798 aa12.42□□□□□ -0.42
SSBP3-206ENST00000420121 GCFC2P16383 781 aaKnown RBP12.42□□□□□ -0.42
SSBP3-206ENST00000420121 NEK4P51957 841 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms