RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 PDE4AP27815 886 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 FAM189BP81408 668 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 FOXK2Q01167 660 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 APOBRQ0VD83 1088 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 TTC22Q5TAA0 569 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 ASCL5Q7RTU5 278 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 KIAA0319LQ8IZA0 1049 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 CMTR1Q8N1G2 835 aaKnown RBP11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 KREMEN2Q8NCW0 462 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 RUFY2Q8WXA3 655 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 TCF25Q9BQ70 676 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 SDF4Q9BRK5 362 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 ELAC1Q9H777 363 aaKnown RBP11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 ST3GAL5Q9UNP4 418 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 GINS2Q9Y248 185 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 COL1A2P08123 1366 aa11.65□□□□□ -0.55
TNFAIP3-202ENST00000420009 hCG_1642624A0A1W2PR95 340 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 ZBTB42B2RXF5 422 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 SH2B2O14492 632 aaPredicted RBP11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 GPR182O15218 404 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 HBP1O60381 514 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 CCNE2O96020 404 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 ARP10275 920 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 MTMR3Q13615 1198 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 DSC3Q14574 896 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 ODR4Q5SWX8 454 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 ZBTB33Q86T24 672 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 FAM228AQ86W67 206 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 TEX2Q8IWB9 1127 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 UBALD2Q8IYN6 164 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 TMEM105Q8N8V8 129 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 MARVELD3Q96A59 401 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 APOL5Q9BWW9 433 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 TMEM117Q9H0C3 514 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 ATP6V0A4Q9HBG4 840 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 AGO4Q9HCK5 861 aaKnown RBP11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 NGRNQ9NPE2 291 aaKnown RBP11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 ENTPD7Q9NQZ7 604 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 RNF19AQ9NV58 838 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 CDH22Q9UJ99 828 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 SORCS3Q9UPU3 1222 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 NR2E1Q9Y466 385 aa11.64□□□□□ -0.55
TNFAIP3-202ENST00000420009 PRR23AA6NEV1 266 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 MEIS1O00470 390 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 SGSM2O43147 1006 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 PRC1O43663 620 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 C22orf31O95567 290 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 BRD1O95696 1058 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 CALM1P0DP23 149 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 CALM2P0DP24 149 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 CALM3P0DP25 149 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 RXRAP19793 462 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 SP100P23497 879 aaPredicted RBP11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 PPM1AP35813 382 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 NBL1P41271 181 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 CRYBB1P53674 252 aaPredicted RBP11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 COL9A3Q14050 684 aaPredicted RBP11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 CEP55Q53EZ4 464 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 TYW1BQ6NUM6 668 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 LLGL2Q6P1M3 1020 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 CASC1Q6TDU7 716 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 KCNT2Q6UVM3 1135 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 ABHD15Q6UXT9 468 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 LRRC55Q6ZSA7 311 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 TMTC3Q6ZXV5 915 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 HEATR3Q7Z4Q2 680 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 CCDC60Q8IWA6 550 aaPredicted RBP11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 LRRC43Q8N309 656 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 CASP10Q92851 521 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 MAP4K1Q92918 833 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 TMEM87BQ96K49 555 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 NECTIN4Q96NY8 510 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 CASD1Q96PB1 797 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 OSMRQ99650 979 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 ADAM7Q9H2U9 754 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 POMKQ9H5K3 350 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 PUF60Q9UHX1 559 aaKnown RBP11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 HCFC2Q9Y5Z7 792 aa11.63□□□□□ -0.55
TNFAIP3-202ENST00000420009 C2CD4DB7Z1M9 353 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 HOXA2O43364 376 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 GPR32O75388 356 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 PYGBP11216 843 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 ATP4AP20648 1035 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 PBX3P40426 434 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 LIFRP42702 1097 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 KIZQ2M2Z5 673 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 TPRNQ4KMQ1 711 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 ZNF484Q5JVG2 852 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 FAM160B1Q5W0V3 765 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 WWC2Q6AWC2 1192 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 NFXL1Q6ZNB6 911 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 TMTC2Q8N394 836 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 PGBD1Q96JS3 809 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 ZNF558Q96NG5 402 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 SMOC2Q9H3U7 446 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 TSHZ2Q9NRE2 1034 aa11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 RBM8AQ9Y5S9 174 aaKnown RBP11.62□□□□□ -0.55
TNFAIP3-202ENST00000420009 CNTNAP5Q8WYK1 1306 aa11.61□□□□□ -0.55
TNFAIP3-202ENST00000420009 CCDC69A6NI79 296 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms