RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 U2AF2P26368 475 aaKnown RBP eCLIP22.79■■□□□ 1.24
GTF3A-202ENST00000419181 MCM7P33993 719 aa22.79■■□□□ 1.24
GTF3A-202ENST00000419181 CRYBB1P53674 252 aaPredicted RBP22.79■■□□□ 1.24
GTF3A-202ENST00000419181 SPRED2Q7Z698 418 aa22.79■■□□□ 1.24
GTF3A-202ENST00000419181 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.79■■□□□ 1.24
GTF3A-202ENST00000419181 SP7Q8TDD2 431 aaPredicted RBP22.79■■□□□ 1.24
GTF3A-202ENST00000419181 PPP1R16BQ96T49 567 aa22.79■■□□□ 1.24
GTF3A-202ENST00000419181 SH2D3AQ9BRG2 576 aa22.79■■□□□ 1.24
GTF3A-202ENST00000419181 LXNQ9BS40 222 aa22.79■■□□□ 1.24
GTF3A-202ENST00000419181 TMEM60Q9H2L4 133 aa22.79■■□□□ 1.24
GTF3A-202ENST00000419181 TTC12Q9H892 705 aaPredicted RBP22.79■■□□□ 1.24
GTF3A-202ENST00000419181 CERS4Q9HA82 394 aa22.79■■□□□ 1.24
GTF3A-202ENST00000419181 SUGCTQ9HAC7 445 aa22.79■■□□□ 1.24
GTF3A-202ENST00000419181 AKT3Q9Y243 479 aa22.79■■□□□ 1.24
GTF3A-202ENST00000419181 NOC2LQ9Y3T9 749 aaKnown RBP22.79■■□□□ 1.24
GTF3A-202ENST00000419181 KIF3AQ9Y496 699 aa22.79■■□□□ 1.24
GTF3A-202ENST00000419181 GTF3C3Q9Y5Q9 886 aa22.79■■□□□ 1.24
GTF3A-202ENST00000419181 IGKV6-21A0A0C4DH24 114 aa22.78■■□□□ 1.24
GTF3A-202ENST00000419181 UPP2O95045 317 aa22.78■■□□□ 1.24
GTF3A-202ENST00000419181 ORC2Q13416 577 aaPredicted RBP22.78■■□□□ 1.24
GTF3A-202ENST00000419181 GNL2Q13823 731 aaKnown RBP22.78■■□□□ 1.24
GTF3A-202ENST00000419181 TMEM266Q2M3C6 531 aa22.78■■□□□ 1.24
GTF3A-202ENST00000419181 RTN4RL1Q86UN2 441 aaPredicted RBP22.78■■□□□ 1.24
GTF3A-202ENST00000419181 C4orf19Q8IY42 314 aa22.78■■□□□ 1.24
GTF3A-202ENST00000419181 ZNF710Q8N1W2 664 aa22.78■■□□□ 1.24
GTF3A-202ENST00000419181 OSMRQ99650 979 aa22.78■■□□□ 1.24
GTF3A-202ENST00000419181 ADAMTS10Q9H324 1103 aa22.78■■□□□ 1.24
GTF3A-202ENST00000419181 TMX1Q9H3N1 280 aa22.78■■□□□ 1.24
GTF3A-202ENST00000419181 ERVK-5Q9HDB9 667 aa22.78■■□□□ 1.24
GTF3A-202ENST00000419181 RGL1Q9NZL6 768 aa22.78■■□□□ 1.24
GTF3A-202ENST00000419181 ARID2Q68CP9 1835 aa22.78■■□□□ 1.24
GTF3A-202ENST00000419181 EPOPA6NHQ4 379 aa22.77■■□□□ 1.24
GTF3A-202ENST00000419181 RPS6KA5O75582 802 aa22.77■■□□□ 1.24
GTF3A-202ENST00000419181 TXKP42681 527 aa22.77■■□□□ 1.24
GTF3A-202ENST00000419181 NLRP11P59045 1033 aaKnown RBP22.77■■□□□ 1.24
GTF3A-202ENST00000419181 PLA2G4FQ68DD2 849 aa22.77■■□□□ 1.24
GTF3A-202ENST00000419181 FAM43BQ6ZT52 329 aaPredicted RBP22.77■■□□□ 1.24
GTF3A-202ENST00000419181 ARNTL2Q8WYA1 636 aa22.77■■□□□ 1.24
GTF3A-202ENST00000419181 DYDC2Q96IM9 177 aa22.77■■□□□ 1.24
GTF3A-202ENST00000419181 YME1L1Q96TA2 773 aa22.77■■□□□ 1.24
GTF3A-202ENST00000419181 TSPYL2Q9H2G4 693 aaPredicted RBP22.77■■□□□ 1.24
GTF3A-202ENST00000419181 CYP26B1Q9NR63 512 aa22.77■■□□□ 1.24
GTF3A-202ENST00000419181 PRUNE2Q8WUY3 3088 aa22.77■■□□□ 1.24
GTF3A-202ENST00000419181 COL4A4P53420 1690 aaPredicted RBP22.77■■□□□ 1.24
GTF3A-202ENST00000419181 MAFO75444 373 aaPredicted RBP22.76■■□□□ 1.23
GTF3A-202ENST00000419181 IGFBP4P22692 258 aa22.76■■□□□ 1.23
GTF3A-202ENST00000419181 TRAPPC10P48553 1259 aa22.76■■□□□ 1.23
GTF3A-202ENST00000419181 CYP4A11Q02928 519 aa22.76■■□□□ 1.23
GTF3A-202ENST00000419181 DRP2Q13474 957 aa22.76■■□□□ 1.23
GTF3A-202ENST00000419181 HSD17B14Q9BPX1 270 aa22.76■■□□□ 1.23
GTF3A-202ENST00000419181 EIF2AK1Q9BQI3 630 aaKnown RBP22.76■■□□□ 1.23
GTF3A-202ENST00000419181 ZSWIM4Q9H7M6 989 aa22.76■■□□□ 1.23
GTF3A-202ENST00000419181 GPR182O15218 404 aa22.75■■□□□ 1.23
GTF3A-202ENST00000419181 SLITRK3O94933 977 aa22.75■■□□□ 1.23
GTF3A-202ENST00000419181 GJB2P29033 226 aa22.75■■□□□ 1.23
GTF3A-202ENST00000419181 YWHABP31946 246 aaKnown RBP22.75■■□□□ 1.23
GTF3A-202ENST00000419181 GPC3P51654 580 aa22.75■■□□□ 1.23
GTF3A-202ENST00000419181 NPEPPSP55786 919 aa22.75■■□□□ 1.23
GTF3A-202ENST00000419181 ERVK-21P61565 698 aa22.75■■□□□ 1.23
GTF3A-202ENST00000419181 NFX1Q12986 1120 aaKnown RBP22.75■■□□□ 1.23
GTF3A-202ENST00000419181 CTTNQ14247 550 aaKnown RBP22.75■■□□□ 1.23
GTF3A-202ENST00000419181 ZNF174Q15697 407 aa22.75■■□□□ 1.23
GTF3A-202ENST00000419181 TTC38Q5R3I4 469 aa22.75■■□□□ 1.23
GTF3A-202ENST00000419181 ODR4Q5SWX8 454 aa22.75■■□□□ 1.23
GTF3A-202ENST00000419181 FAM228AQ86W67 206 aa22.75■■□□□ 1.23
GTF3A-202ENST00000419181 CRIPAKQ8N1N5 446 aa22.75■■□□□ 1.23
GTF3A-202ENST00000419181 TGS1Q96RS0 853 aaKnown RBP22.75■■□□□ 1.23
GTF3A-202ENST00000419181 ST3GAL5Q9UNP4 418 aa22.75■■□□□ 1.23
GTF3A-202ENST00000419181 PPME1Q9Y570 386 aa22.75■■□□□ 1.23
GTF3A-202ENST00000419181 POTEMA6NI47 508 aa22.74■■□□□ 1.23
GTF3A-202ENST00000419181 RFXAPO00287 272 aa22.74■■□□□ 1.23
GTF3A-202ENST00000419181 LYPLA2O95372 231 aa22.74■■□□□ 1.23
GTF3A-202ENST00000419181 ZNF579Q8NAF0 562 aaKnown RBP22.74■■□□□ 1.23
GTF3A-202ENST00000419181 NEK9Q8TD19 979 aa22.74■■□□□ 1.23
GTF3A-202ENST00000419181 CEP170P1Q96L14 293 aa22.74■■□□□ 1.23
GTF3A-202ENST00000419181 JPH2Q9BR39 696 aaPredicted RBP22.74■■□□□ 1.23
GTF3A-202ENST00000419181 RC3H2Q9HBD1 1191 aaKnown RBP22.74■■□□□ 1.23
GTF3A-202ENST00000419181 NOL7Q9UMY1 257 aaKnown RBP22.74■■□□□ 1.23
GTF3A-202ENST00000419181 UNC80Q8N2C7 3258 aa22.74■■□□□ 1.23
GTF3A-202ENST00000419181 NLRC5Q86WI3 1866 aa22.73■■□□□ 1.23
GTF3A-202ENST00000419181 DLL1O00548 723 aa22.73■■□□□ 1.23
GTF3A-202ENST00000419181 MGEA5O60502 916 aa22.73■■□□□ 1.23
GTF3A-202ENST00000419181 OR52Z1P0C646 297 aa22.73■■□□□ 1.23
GTF3A-202ENST00000419181 EIF4BP23588 611 aaKnown RBP22.73■■□□□ 1.23
GTF3A-202ENST00000419181 DNM2P50570 870 aa22.73■■□□□ 1.23
GTF3A-202ENST00000419181 TPH2Q8IWU9 490 aa22.73■■□□□ 1.23
GTF3A-202ENST00000419181 PPM1EQ8WY54 764 aa22.73■■□□□ 1.23
GTF3A-202ENST00000419181 ZNF668Q96K58 619 aaPredicted RBP22.73■■□□□ 1.23
GTF3A-202ENST00000419181 DHX33Q9H6R0 707 aaKnown RBP22.73■■□□□ 1.23
GTF3A-202ENST00000419181 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.73■■□□□ 1.23
GTF3A-202ENST00000419181 PRRC2BQ5JSZ5 2229 aaKnown RBP22.73■■□□□ 1.23
GTF3A-202ENST00000419181 ZBTB39O15060 712 aa22.72■■□□□ 1.23
GTF3A-202ENST00000419181 DARSP14868 501 aaKnown RBP22.72■■□□□ 1.23
GTF3A-202ENST00000419181 POU3F3P20264 500 aaPredicted RBP22.72■■□□□ 1.23
GTF3A-202ENST00000419181 TOB1P50616 345 aaPredicted RBP22.72■■□□□ 1.23
GTF3A-202ENST00000419181 CDC42EP1Q00587 391 aa22.72■■□□□ 1.23
GTF3A-202ENST00000419181 NBR1Q14596 966 aa22.72■■□□□ 1.23
GTF3A-202ENST00000419181 OTUD6AQ7L8S5 288 aa22.72■■□□□ 1.23
GTF3A-202ENST00000419181 NPAS4Q8IUM7 802 aa22.72■■□□□ 1.23
GTF3A-202ENST00000419181 SLC7A3Q8WY07 619 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms