RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 H0YGN5 161 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 PDXKO00764 312 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 ARHGAP44Q17R89 818 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 DOK7Q18PE1 504 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 C15orf52Q6ZUT6 534 aaKnown RBP16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 SYCE1Q8N0S2 351 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 RBM17Q96I25 401 aaKnown RBP16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 CNOT8Q9UFF9 292 aaKnown RBP16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 BCS1LQ9Y276 419 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 NFS1Q9Y697 457 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 FRMD3A2A2Y4 597 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 CES2O00748 559 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 SPATA31C1P0DKV0 1188 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 FNTAP49354 379 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 PPP2R2AP63151 447 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 NFIAQ12857 509 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 MTMR3Q13615 1198 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 QPCTQ16769 361 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 SLFN13Q68D06 897 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 CPLX4Q7Z7G2 160 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 NT5DC3Q86UY8 548 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 MYCT1Q8N699 235 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 SYT2Q8N9I0 419 aaPredicted RBP16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 TYW1Q9NV66 732 aaKnown RBP16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 CDK5RAP2Q96SN8 1893 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 G3V3G9 751 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 EEF2P13639 858 aaKnown RBP16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 BRD2P25440 801 aaKnown RBP16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 NMT1P30419 496 aaKnown RBP16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 ZC2HC1CQ53FD0 456 aaPredicted RBP16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 DCAF8Q5TAQ9 597 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 DPY19L2P1Q6NXN4 242 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 CCDC13Q8IYE1 715 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 RDH13Q8NBN7 331 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 SLC35G2Q8TBE7 412 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 MDM1Q8TC05 714 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 CTNNBL1Q8WYA6 563 aaPredicted RBP16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 P2RX7Q99572 595 aaKnown RBP16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 JPH2Q9BR39 696 aaPredicted RBP16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 METTL14Q9HCE5 456 aaKnown RBP16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 LRRC4CQ9HCJ2 640 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 ASTN1O14525 1302 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 SBF2Q86WG5 1849 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 FAM86B1E9PN63 330 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 FSBPO95073 299 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 FAM86B2P0C5J1 330 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 RPA1P27694 616 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 CYP2J2P51589 502 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 BIRC3Q13489 604 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 CTTNQ14247 550 aaKnown RBP16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 TMC3Q7Z5M5 1100 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 FAM186BQ8IYM0 893 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 SIX2Q9NPC8 291 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 SUCLA2Q9P2R7 463 aaPredicted RBP16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 DDX20Q9UHI6 824 aaKnown RBP16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 PPP1R9AQ9ULJ8 1098 aa16.49■□□□□ 0.23
SEMA3B-203ENST00000419007 PHF20L1A8MW92 1017 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 MEIS2O14770 477 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 FAM13AO94988 1023 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 KRT13P13646 458 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 PRKCIP41743 596 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 ZFPM1Q8IX07 1006 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 UHMK1Q8TAS1 419 aaKnown RBP16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 GLG1Q92896 1179 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 RABGAP1Q9Y3P9 1069 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 PLIN4Q96Q06 1357 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 PPP1R12BO60237 982 aaPredicted RBP16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 LRRN2O75325 713 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 FERP16591 822 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 CDR1P51861 262 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 PLS1Q14651 629 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 SAMD1Q6SPF0 538 aaPredicted RBP16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 TPH2Q8IWU9 490 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 ZC3H3Q8IXZ2 948 aaKnown RBP16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 LNX1Q8TBB1 728 aaPredicted RBP16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 ETNPPLQ8TBG4 499 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 FMO2Q99518 471 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 SLITRK6Q9H5Y7 841 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 SLC12A6Q9UHW9 1150 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 TMEM110-MUSTN1A8MSY1 372 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 CLSTN1O94985 981 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 SERPINB2P05120 415 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 TRIM49P0CI25 452 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 TRIM49CP0CI26 452 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 SPIRE1Q08AE8 756 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 DRAP1Q14919 205 aaPredicted RBP16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 EMC10Q5UCC4 262 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 CERS5Q8N5B7 392 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 RAPGEF5Q92565 580 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 CEP89Q96ST8 783 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 DNAJC12Q9UKB3 198 aa16.48■□□□□ 0.23
SEMA3B-203ENST00000419007 PLTPP55058 493 aa16.47■□□□□ 0.23
SEMA3B-203ENST00000419007 COG2Q14746 738 aa16.47■□□□□ 0.23
SEMA3B-203ENST00000419007 GLT8D2Q9H1C3 349 aa16.47■□□□□ 0.23
SEMA3B-203ENST00000419007 CD248Q9HCU0 757 aa16.47■□□□□ 0.23
SEMA3B-203ENST00000419007 TMOD4Q9NZQ9 345 aa16.47■□□□□ 0.23
SEMA3B-203ENST00000419007 ZBTB39O15060 712 aa16.47■□□□□ 0.23
SEMA3B-203ENST00000419007 TRAPPC3O43617 180 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms