RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 VTA1Q9NP79 307 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 TRMT1Q9NXH9 659 aaKnown RBP9.19□□□□□ -0.94
USP54-203ENST00000418501 ASAP2O43150 1006 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 CELF2O95319 508 aaKnown RBP9.19□□□□□ -0.94
USP54-203ENST00000418501 ACTR2P61160 394 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 SP4Q02446 784 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 ARHGEF6Q15052 776 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 CCDC144BQ3MJ40 725 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 METTL7BQ6UX53 244 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.19□□□□□ -0.94
USP54-203ENST00000418501 MSL3Q8N5Y2 521 aaKnown RBP9.19□□□□□ -0.94
USP54-203ENST00000418501 KIAA0895Q8NCT3 520 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 LMBR1Q8WVP7 490 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 SYN2Q92777 582 aaPredicted RBP9.19□□□□□ -0.94
USP54-203ENST00000418501 WNK4Q96J92 1243 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 UIMC1Q96RL1 719 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 MAPK13O15264 365 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 AP5Z1O43299 807 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 PRPF6O94906 941 aaKnown RBP9.19□□□□□ -0.94
USP54-203ENST00000418501 NAP1L1P55209 391 aaKnown RBP9.19□□□□□ -0.94
USP54-203ENST00000418501 XXYLT1Q8NBI6 393 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 REPS2Q8NFH8 660 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 IMPG2Q9BZV3 1241 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 PPP2R2CQ9Y2T4 447 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 DOCK1Q14185 1865 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 EML1O00423 815 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 TACC1O75410 805 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 LIG4P49917 911 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 STAT5BP51692 787 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 ADKP55263 362 aaKnown RBP9.19□□□□□ -0.94
USP54-203ENST00000418501 MARSP56192 900 aaKnown RBP9.19□□□□□ -0.94
USP54-203ENST00000418501 CDK17Q00537 523 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 TBX2Q13207 712 aaPredicted RBP9.19□□□□□ -0.94
USP54-203ENST00000418501 KYAT1Q16773 422 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 LDLRAD1Q5T700 205 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 PPP1R2P3Q6NXS1 205 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 CYP2W1Q8TAV3 490 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 FNBP1Q96RU3 617 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 LSM14BQ9BX40 385 aaKnown RBP9.19□□□□□ -0.94
USP54-203ENST00000418501 ST6GALNAC4Q9H4F1 302 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 PYCARDQ9ULZ3 195 aa9.19□□□□□ -0.94
USP54-203ENST00000418501 GTPBP10A4D1E9 387 aaKnown RBP9.18□□□□□ -0.94
USP54-203ENST00000418501 GH1P01241 217 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 GNG11P61952 73 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 ERVK-9P63128 1117 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 ERVK-24P63145 666 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 ENPEPQ07075 957 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 LRMPQ12912 555 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 CEP89Q96ST8 783 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 RUSC1Q9BVN2 902 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 ABHD10Q9NUJ1 306 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 OATP04181 439 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 FERP16591 822 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 AP3M2P53677 418 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 MXD4Q14582 209 aaPredicted RBP9.18□□□□□ -0.94
USP54-203ENST00000418501 KIF22Q14807 665 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 ZNF720Q7Z2F6 126 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 KCNK18Q7Z418 384 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 HAUS6Q7Z4H7 955 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 BBXQ8WY36 941 aaPredicted RBP9.18□□□□□ -0.94
USP54-203ENST00000418501 CCDC102AQ96A19 550 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 PDCL3Q9H2J4 239 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 SEMA6BQ9H3T3 888 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 EPN1Q9Y6I3 576 aaPredicted RBP9.18□□□□□ -0.94
USP54-203ENST00000418501 IGSF9BQ9UPX0 1349 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 DYNC1I1O14576 645 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 MAGEB2O15479 319 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 TUBBP07437 444 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 STAT1P42224 750 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 RARRES1P49788 294 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 ZNF131P52739 623 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 CCZ1BP86790 482 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 CCZ1P86791 482 aaPredicted RBP9.18□□□□□ -0.94
USP54-203ENST00000418501 CACNB1Q02641 598 aaPredicted RBP9.18□□□□□ -0.94
USP54-203ENST00000418501 WDR44Q5JSH3 913 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 CHADLQ6NUI6 762 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 ZNF710Q8N1W2 664 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 SCFD1Q8WVM8 642 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 DUSP9Q99956 384 aaKnown RBP9.18□□□□□ -0.94
USP54-203ENST00000418501 TSKSQ9UJT2 592 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 TRPC6Q9Y210 931 aa9.18□□□□□ -0.94
USP54-203ENST00000418501 DIS3Q9Y2L1 958 aaKnown RBP9.18□□□□□ -0.94
USP54-203ENST00000418501 SIPA1L1O43166 1804 aa9.17□□□□□ -0.94
USP54-203ENST00000418501 A0A0U1RQG5 324 aaPredicted RBP9.17□□□□□ -0.94
USP54-203ENST00000418501 CTAGE9A4FU28 777 aa9.17□□□□□ -0.94
USP54-203ENST00000418501 PDHXO00330 501 aa9.17□□□□□ -0.94
USP54-203ENST00000418501 GFPT2O94808 682 aa9.17□□□□□ -0.94
USP54-203ENST00000418501 ETF1P62495 437 aaKnown RBP9.17□□□□□ -0.94
USP54-203ENST00000418501 PRKCEQ02156 737 aa9.17□□□□□ -0.94
USP54-203ENST00000418501 CKAP4Q07065 602 aaKnown RBP9.17□□□□□ -0.94
USP54-203ENST00000418501 SLC9A9Q8IVB4 645 aa9.17□□□□□ -0.94
USP54-203ENST00000418501 REM2Q8IYK8 340 aaPredicted RBP9.17□□□□□ -0.94
USP54-203ENST00000418501 GJA10Q969M2 543 aa9.17□□□□□ -0.94
USP54-203ENST00000418501 SCLT1Q96NL6 688 aa9.17□□□□□ -0.94
USP54-203ENST00000418501 SPC25Q9HBM1 224 aa9.17□□□□□ -0.94
USP54-203ENST00000418501 ZFYVE28Q9HCC9 887 aa9.17□□□□□ -0.94
USP54-203ENST00000418501 GGPS1O95749 300 aa9.17□□□□□ -0.94
USP54-203ENST00000418501 MCM3P25205 808 aa9.17□□□□□ -0.94
USP54-203ENST00000418501 MRPS9P82933 396 aaKnown RBP9.17□□□□□ -0.94
USP54-203ENST00000418501 RBM10P98175 930 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms