RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 ACP6Q9NPH0 428 aa12.96□□□□□ -0.34
LIMK1-202ENST00000418310 DNAJC12Q9UKB3 198 aa12.96□□□□□ -0.34
LIMK1-202ENST00000418310 PLIN4Q96Q06 1357 aa12.96□□□□□ -0.34
LIMK1-202ENST00000418310 TLDC2A0PJX2 215 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 DCDC2CA8MYV0 355 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 SHOX2O60902 331 aaPredicted RBP12.95□□□□□ -0.34
LIMK1-202ENST00000418310 BMP3P12645 472 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 LSP1P33241 339 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 HDLBPQ00341 1268 aaKnown RBP12.95□□□□□ -0.34
LIMK1-202ENST00000418310 ODR4Q5SWX8 454 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 LNX1Q8TBB1 728 aaPredicted RBP12.95□□□□□ -0.34
LIMK1-202ENST00000418310 SYN2Q92777 582 aaPredicted RBP12.95□□□□□ -0.34
LIMK1-202ENST00000418310 GJD4Q96KN9 370 aaPredicted RBP12.95□□□□□ -0.34
LIMK1-202ENST00000418310 TYW1Q9NV66 732 aaKnown RBP12.95□□□□□ -0.34
LIMK1-202ENST00000418310 PI4KBQ9UBF8 816 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 ATP8A1Q9Y2Q0 1164 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 TGFB1I1O43294 461 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 ATMINO43313 823 aaPredicted RBP12.95□□□□□ -0.34
LIMK1-202ENST00000418310 BUB1BO60566 1050 aaPredicted RBP12.95□□□□□ -0.34
LIMK1-202ENST00000418310 ERLIN2O94905 339 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 KRT13P13646 458 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 STAT1P42224 750 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 PPM1EQ8WY54 764 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 ARHGEF26Q96DR7 871 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 CRAMP1Q96RY5 1269 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 CSRNP1Q96S65 589 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 WDR18Q9BV38 432 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 SIX2Q9NPC8 291 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 TMEM150BA6NC51 233 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 OPLAHO14841 1288 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 RPL13P26373 211 aaKnown RBP12.95□□□□□ -0.34
LIMK1-202ENST00000418310 GLE1Q53GS7 698 aaKnown RBP12.95□□□□□ -0.34
LIMK1-202ENST00000418310 FRMD5Q7Z6J6 570 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 FAM178BQ8IXR5 827 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 GLG1Q92896 1179 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 CCDC17Q96LX7 622 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 WRAP73Q9P2S5 460 aaPredicted RBP12.95□□□□□ -0.34
LIMK1-202ENST00000418310 PPP1R9AQ9ULJ8 1098 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 CAPN7Q9Y6W3 813 aa12.95□□□□□ -0.34
LIMK1-202ENST00000418310 EXOC3O60645 756 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 INPP5BP32019 993 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 SLC35G2Q8TBE7 412 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 FAM84AQ96KN4 292 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 FBXO28Q9NVF7 368 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 PRR12Q9ULL5 1215 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 NOVA2Q9UNW9 492 aaKnown RBP12.94□□□□□ -0.34
LIMK1-202ENST00000418310 TRAF3IP3Q9Y228 551 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 COL24A1Q17RW2 1714 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 PDXKO00764 312 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 RGL2O15211 777 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 GAS7O60861 476 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 KIAA0754O94854 1291 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 MMP10P09238 476 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 HOXA10P31260 410 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-202ENST00000418310 IFFO1Q0D2I5 559 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 UAP1Q16222 522 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-202ENST00000418310 AOC3Q16853 763 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 KIAA1755Q5JYT7 1200 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 PPP4R3CPQ6ZMV5 832 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 MIGA2Q7L4E1 593 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 KAT2BQ92831 832 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 ATP6V1G3Q96LB4 118 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 THAP2Q9H0W7 228 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 PITPNM2Q9BZ72 1349 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 MYH4Q9Y623 1939 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 GCOM1H8Y6P7 765 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-202ENST00000418310 MYO1FO00160 1098 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 MYZAPP0CAP1 466 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 DHX9Q08211 1270 aaKnown RBP12.94□□□□□ -0.34
LIMK1-202ENST00000418310 IFT88Q13099 833 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 KRT71Q3SY84 523 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 RBM26Q5T8P6 1007 aaKnown RBP12.94□□□□□ -0.34
LIMK1-202ENST00000418310 CHADLQ6NUI6 762 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 LRRC57Q8N9N7 239 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 ZSWIM2Q8NEG5 633 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 SLC20A1Q8WUM9 679 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 HOMER2Q9NSB8 354 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 RNF14Q9UBS8 474 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 VAV3Q9UKW4 847 aa12.94□□□□□ -0.34
LIMK1-202ENST00000418310 FRMD3A2A2Y4 597 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 CLSTN1O94985 981 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 MARSP56192 900 aaKnown RBP12.93□□□□□ -0.34
LIMK1-202ENST00000418310 DLG4P78352 724 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 AP3B2Q13367 1082 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 PHLDB2Q86SQ0 1253 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 CPNE8Q86YQ8 564 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 DCAF4Q8WV16 495 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 CTNNBL1Q8WYA6 563 aaPredicted RBP12.93□□□□□ -0.34
LIMK1-202ENST00000418310 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.93□□□□□ -0.342e-7■■□□□ 14.2
LIMK1-202ENST00000418310 GOLGA8IPA6NC78 632 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 GOLGA8JA6NMD2 632 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 PPP1R12BO60237 982 aaPredicted RBP12.93□□□□□ -0.34
LIMK1-202ENST00000418310 ARP10275 920 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 CHRNA5P30532 468 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 DPY19L2P1Q6NXN4 242 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 HS2ST1Q7LGA3 356 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 EFCAB13Q8IY85 973 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 OTUD6BQ8N6M0 293 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 MDM1Q8TC05 714 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms