RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 NCOR1O75376 2440 aa20.15■□□□□ 0.82
CPNE1-210ENST00000416778 ADGRA3Q8IWK6 1321 aa20.14■□□□□ 0.81
CPNE1-210ENST00000416778 CCDC194A0A1B0GVG4 234 aa20.14■□□□□ 0.81
CPNE1-210ENST00000416778 SLC37A4O43826 429 aa20.14■□□□□ 0.81
CPNE1-210ENST00000416778 LARGE1O95461 756 aa20.14■□□□□ 0.81
CPNE1-210ENST00000416778 STAG3L1P0CL83 205 aa20.14■□□□□ 0.81
CPNE1-210ENST00000416778 TMOD1P28289 359 aa20.14■□□□□ 0.81
CPNE1-210ENST00000416778 CLCN3P51790 818 aa20.14■□□□□ 0.81
CPNE1-210ENST00000416778 NLRP11P59045 1033 aaKnown RBP20.14■□□□□ 0.81
CPNE1-210ENST00000416778 EARS2Q5JPH6 523 aaKnown RBP20.14■□□□□ 0.81
CPNE1-210ENST00000416778 ODR4Q5SWX8 454 aa20.14■□□□□ 0.81
CPNE1-210ENST00000416778 LRRC71Q8N4P6 559 aa20.14■□□□□ 0.81
CPNE1-210ENST00000416778 PPP1R16BQ96T49 567 aa20.14■□□□□ 0.81
CPNE1-210ENST00000416778 UHRF1Q96T88 793 aaPredicted RBP20.14■□□□□ 0.81
CPNE1-210ENST00000416778 OSMRQ99650 979 aa20.14■□□□□ 0.81
CPNE1-210ENST00000416778 ADAM2Q99965 735 aa20.14■□□□□ 0.81
CPNE1-210ENST00000416778 KCNMB3Q9NPA1 279 aa20.14■□□□□ 0.81
CPNE1-210ENST00000416778 RWDD3Q9Y3V2 267 aa20.14■□□□□ 0.81
CPNE1-210ENST00000416778 COL4A6Q14031 1691 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 EML1O00423 815 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 GRM6O15303 877 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 CTNNB1P35222 781 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 SARSP49591 514 aaKnown RBP20.13■□□□□ 0.81
CPNE1-210ENST00000416778 DSC3Q14574 896 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 XKR3Q5GH77 459 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 PIK3AP1Q6ZUJ8 805 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 SLC24A5Q71RS6 500 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 NEK8Q86SG6 692 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 FAM228AQ86W67 206 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 CMTR2Q8IYT2 770 aaKnown RBP20.13■□□□□ 0.81
CPNE1-210ENST00000416778 ZNF710Q8N1W2 664 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 BANK1Q8NDB2 785 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 IL27Q8NEV9 243 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 WASF1Q92558 559 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 GTF3C6Q969F1 213 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 FAM20AQ96MK3 541 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 PCDHB7Q9Y5E2 793 aa20.13■□□□□ 0.81
CPNE1-210ENST00000416778 EVPLQ92817 2033 aa20.12■□□□□ 0.81
CPNE1-210ENST00000416778 C9IYK1 514 aa20.12■□□□□ 0.81
CPNE1-210ENST00000416778 CENPBP07199 599 aaPredicted RBP20.12■□□□□ 0.81
CPNE1-210ENST00000416778 HAS1Q92839 578 aa20.12■□□□□ 0.81
CPNE1-210ENST00000416778 TNFRSF25Q93038 417 aa20.12■□□□□ 0.81
CPNE1-210ENST00000416778 NECAB3Q96P71 396 aaPredicted RBP20.12■□□□□ 0.81
CPNE1-210ENST00000416778 PLVAPQ9BX97 442 aa20.12■□□□□ 0.81
CPNE1-210ENST00000416778 C1orf112Q9NSG2 853 aa20.12■□□□□ 0.81
CPNE1-210ENST00000416778 AKT3Q9Y243 479 aa20.12■□□□□ 0.81
CPNE1-210ENST00000416778 MRPL42Q9Y6G3 142 aaKnown RBP20.12■□□□□ 0.81
CPNE1-210ENST00000416778 IGKV6-21A0A0C4DH24 114 aa20.11■□□□□ 0.81
CPNE1-210ENST00000416778 TMEM150BA6NC51 233 aa20.11■□□□□ 0.81
CPNE1-210ENST00000416778 DDX11L8A8MPP1 907 aa20.11■□□□□ 0.81
CPNE1-210ENST00000416778 GCFC2P16383 781 aaKnown RBP20.11■□□□□ 0.81
CPNE1-210ENST00000416778 EIF4BP23588 611 aaKnown RBP20.11■□□□□ 0.81
CPNE1-210ENST00000416778 GATMP50440 423 aa20.11■□□□□ 0.81
CPNE1-210ENST00000416778 PPP2R5CQ13362 524 aa20.11■□□□□ 0.81
CPNE1-210ENST00000416778 NSUN7Q8NE18 718 aaKnown RBP20.11■□□□□ 0.81
CPNE1-210ENST00000416778 MAP7D2Q96T17 732 aa20.11■□□□□ 0.81
CPNE1-210ENST00000416778 C11orf84Q9BUA3 381 aaPredicted RBP20.11■□□□□ 0.81
CPNE1-210ENST00000416778 UBE2ZQ9H832 354 aaPredicted RBP20.11■□□□□ 0.81
CPNE1-210ENST00000416778 VAV3Q9UKW4 847 aa20.11■□□□□ 0.81
CPNE1-210ENST00000416778 LRFN2Q9ULH4 789 aa20.11■□□□□ 0.81
CPNE1-210ENST00000416778 PLAGL2Q9UPG8 496 aa20.11■□□□□ 0.81
CPNE1-210ENST00000416778 MYH9P35579 1960 aaKnown RBP20.11■□□□□ 0.81
CPNE1-210ENST00000416778 BRWD1Q9NSI6 2320 aa20.1■□□□□ 0.81
CPNE1-210ENST00000416778 DENND3A2RUS2 1198 aa20.1■□□□□ 0.81
CPNE1-210ENST00000416778 TBX3O15119 743 aa20.1■□□□□ 0.81
CPNE1-210ENST00000416778 CCNT1O60563 726 aaKnown RBP20.1■□□□□ 0.81
CPNE1-210ENST00000416778 PSMC5P62195 406 aa20.1■□□□□ 0.81
CPNE1-210ENST00000416778 TBC1D8BQ0IIM8 1120 aa20.1■□□□□ 0.81
CPNE1-210ENST00000416778 NR5A1Q13285 461 aa20.1■□□□□ 0.81
CPNE1-210ENST00000416778 DRP2Q13474 957 aa20.1■□□□□ 0.81
CPNE1-210ENST00000416778 CAMK1Q14012 370 aa20.1■□□□□ 0.81
CPNE1-210ENST00000416778 TCEAL5Q5H9L2 206 aa20.1■□□□□ 0.81
CPNE1-210ENST00000416778 FAM102BQ5T8I3 360 aa20.1■□□□□ 0.81
CPNE1-210ENST00000416778 ANO5Q75V66 913 aa20.1■□□□□ 0.81
CPNE1-210ENST00000416778 SH2D3AQ9BRG2 576 aa20.1■□□□□ 0.81
CPNE1-210ENST00000416778 LMAN2LQ9H0V9 348 aa20.1■□□□□ 0.81
CPNE1-210ENST00000416778 MYO7AQ13402 2215 aa20.1■□□□□ 0.81
CPNE1-210ENST00000416778 FAM205CA6NFA0 338 aa20.09■□□□□ 0.81
CPNE1-210ENST00000416778 GPC3P51654 580 aa20.09■□□□□ 0.81
CPNE1-210ENST00000416778 CDC42EP1Q00587 391 aa20.09■□□□□ 0.81
CPNE1-210ENST00000416778 COL19A1Q14993 1142 aa20.09■□□□□ 0.81
CPNE1-210ENST00000416778 LEXMQ3ZCV2 418 aa20.09■□□□□ 0.81
CPNE1-210ENST00000416778 MTERF2Q49AM1 385 aa20.09■□□□□ 0.81
CPNE1-210ENST00000416778 PAN2Q504Q3 1202 aaKnown RBP20.09■□□□□ 0.81
CPNE1-210ENST00000416778 TIGD5Q53EQ6 642 aa20.09■□□□□ 0.81
CPNE1-210ENST00000416778 NAALADL2Q58DX5 795 aa20.09■□□□□ 0.81
CPNE1-210ENST00000416778 SPPL3Q8TCT6 385 aa20.09■□□□□ 0.81
CPNE1-210ENST00000416778 P2RX5Q93086 422 aa20.09■□□□□ 0.81
CPNE1-210ENST00000416778 ZNF668Q96K58 619 aaPredicted RBP20.09■□□□□ 0.81
CPNE1-210ENST00000416778 NAP1L4Q99733 375 aaKnown RBP20.09■□□□□ 0.81
CPNE1-210ENST00000416778 NSUN3Q9H649 340 aaKnown RBP20.09■□□□□ 0.81
CPNE1-210ENST00000416778 ELAC1Q9H777 363 aaKnown RBP20.09■□□□□ 0.81
CPNE1-210ENST00000416778 ALG13Q9NP73 1137 aaKnown RBP20.09■□□□□ 0.81
CPNE1-210ENST00000416778 RNF216Q9NWF9 866 aaPredicted RBP20.09■□□□□ 0.81
CPNE1-210ENST00000416778 LOXHD1Q8IVV2 1947 aa20.08■□□□□ 0.81
CPNE1-210ENST00000416778 COL4A4P53420 1690 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-210ENST00000416778 JAK2O60674 1132 aa20.08■□□□□ 0.81
CPNE1-210ENST00000416778 MAFO75444 373 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-210ENST00000416778 DARSP14868 501 aaKnown RBP20.08■□□□□ 0.81
CPNE1-210ENST00000416778 KRT2P35908 639 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms