RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 RBPJLQ9UBG7 517 aa7.35□□□□□ -1.23
HDAC8-211ENST00000415409 LIMA1Q9UHB6 759 aaKnown RBP7.35□□□□□ -1.23
HDAC8-211ENST00000415409 COL4A3BPQ9Y5P4 624 aa7.35□□□□□ -1.23
HDAC8-211ENST00000415409 POLR2AP24928 1970 aaKnown RBP7.35□□□□□ -1.23
HDAC8-211ENST00000415409 NFASCO94856 1347 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 CCL15-CCL14A0A0B4J2E2 113 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 NPHP3-ACAD11A0A0J9YXS1 232 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 A0A1B0GTH6 734 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 FRMD3A2A2Y4 597 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 LRRC10BA6NIK2 292 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 SPATA31C2B4DYI2 1134 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 J3QL48 77 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 PDHXO00330 501 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 N4BP3O15049 544 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 ATP9AO75110 1047 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 COBLO75128 1261 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 FAM13AO94988 1023 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 PSAPP07602 524 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 TPM1P09493 284 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 ZBTB48P10074 688 aaPredicted RBP7.34□□□□□ -1.23
HDAC8-211ENST00000415409 GUCY2CP25092 1073 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 ICAM3P32942 547 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 ALDH5A1P51649 535 aaPredicted RBP7.34□□□□□ -1.23
HDAC8-211ENST00000415409 COPB1P53618 953 aaKnown RBP7.34□□□□□ -1.23
HDAC8-211ENST00000415409 PSMC5P62195 406 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 CNTN2Q02246 1040 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 RAD51AP2Q09MP3 1159 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 NR1I3Q14994 352 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 KRT31Q15323 416 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 CCL15Q16663 113 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 ARSHQ5FYA8 562 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 TCP11X2Q5H9J9 407 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 WDR78Q5VTH9 848 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 SPECC1LQ69YQ0 1117 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 ANKRD40Q6AI12 368 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 CENPPQ6IPU0 288 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 RINT1Q6NUQ1 792 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 TTI2Q6NXR4 508 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 PPFIBP1Q86W92 1011 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 CREBRFQ8IUR6 639 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 SMAP1Q8IYB5 467 aaPredicted RBP7.34□□□□□ -1.23
HDAC8-211ENST00000415409 BANK1Q8NDB2 785 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 GPRC5AQ8NFJ5 357 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 PIGOQ8TEQ8 1089 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 SMCR8Q8TEV9 937 aaPredicted RBP7.34□□□□□ -1.23
HDAC8-211ENST00000415409 ATP6V0A1Q93050 837 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 HPS3Q969F9 1004 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 MMP19Q99542 508 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 REEP2Q9BRK0 252 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 TIPINQ9BVW5 301 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 SEL1LQ9UBV2 794 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 NRBP1Q9UHY1 535 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 DBR1Q9UK59 544 aaKnown RBP7.34□□□□□ -1.23
HDAC8-211ENST00000415409 ODF2LQ9ULJ1 636 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 PCDHA10Q9Y5I2 948 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 MYH6P13533 1939 aa7.34□□□□□ -1.23
HDAC8-211ENST00000415409 DOCK1Q14185 1865 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 LOC102724159A0A0B4J2E5 919 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 TRIM49BA6NDI0 452 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 BTBD19C9JJ37 291 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 KCNA2P16389 499 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 JUNDP17535 347 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 SFPQP23246 707 aaKnown RBP eCLIP7.33□□□□□ -1.24
HDAC8-211ENST00000415409 EDNRBP24530 442 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 MTIF2P46199 727 aaKnown RBP7.33□□□□□ -1.24
HDAC8-211ENST00000415409 GCLCP48506 637 aaPredicted RBP7.33□□□□□ -1.24
HDAC8-211ENST00000415409 PMS1P54277 932 aaKnown RBP7.33□□□□□ -1.24
HDAC8-211ENST00000415409 ERVK-9P63128 1117 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 ERVK-24P63145 666 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 PWP2Q15269 919 aaKnown RBP7.33□□□□□ -1.24
HDAC8-211ENST00000415409 LRRC41Q15345 812 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 CCDC144BQ3MJ40 725 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 MIS18BP1Q6P0N0 1132 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 KCNV1Q6PIU1 500 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 C1orf186Q6ZWK4 172 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 OTUD6AQ7L8S5 288 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 SFR1Q86XK3 245 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 LRRC8AQ8IWT6 810 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 C4orf19Q8IY42 314 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 MYCT1Q8N699 235 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 FAM133AQ8N9E0 248 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 PARK7Q99497 189 aaKnown RBP7.33□□□□□ -1.24
HDAC8-211ENST00000415409 DUSP9Q99956 384 aaKnown RBP7.33□□□□□ -1.24
HDAC8-211ENST00000415409 RUSC1Q9BVN2 902 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 SEMA6BQ9H3T3 888 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 PARVGQ9HBI0 331 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 JPH1Q9HDC5 661 aaPredicted RBP7.33□□□□□ -1.24
HDAC8-211ENST00000415409 ANKEF1Q9NU02 776 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 TBC1D7Q9P0N9 293 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 SLC9A2Q9UBY0 812 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 PCDHA2Q9Y5H9 948 aa7.33□□□□□ -1.24
HDAC8-211ENST00000415409 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.33□□□□□ -1.24
HDAC8-211ENST00000415409 ASB14A6NK59 587 aa7.32□□□□□ -1.24
HDAC8-211ENST00000415409 PES1O00541 588 aaKnown RBP7.32□□□□□ -1.24
HDAC8-211ENST00000415409 BACH1O14867 736 aa7.32□□□□□ -1.24
HDAC8-211ENST00000415409 CALUO43852 315 aaPredicted RBP7.32□□□□□ -1.24
HDAC8-211ENST00000415409 ZNF500O60304 480 aaPredicted RBP7.32□□□□□ -1.24
HDAC8-211ENST00000415409 PEX10O60683 326 aa7.32□□□□□ -1.24
HDAC8-211ENST00000415409 WFS1O76024 890 aa7.32□□□□□ -1.24
HDAC8-211ENST00000415409 GNA14O95837 355 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms