RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 HTTP42858 3142 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 PSEN2P49810 448 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 RTP1P59025 263 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 NLRP12P59046 1061 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 TYRO3Q06418 890 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 MAPK7Q13164 816 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 MFSD10Q14728 455 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 KCNA10Q16322 511 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 TRMT1LQ7Z2T5 733 aaKnown RBP15.81■□□□□ 0.12
SF3B1-204ENST00000414963 DAW1Q8N136 415 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 ARRDC4Q8NCT1 418 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 JPH2Q9BR39 696 aaPredicted RBP15.81■□□□□ 0.12
SF3B1-204ENST00000414963 SH2D3AQ9BRG2 576 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 UNC93B1Q9H1C4 597 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 ATP6V0A4Q9HBG4 840 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 XPNPEP1Q9NQW7 623 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 ANO10Q9NW15 660 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 SEL1LQ9UBV2 794 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 COL4A3BPQ9Y5P4 624 aa15.81■□□□□ 0.12
SF3B1-204ENST00000414963 MYH9P35579 1960 aaKnown RBP15.8■□□□□ 0.12
SF3B1-204ENST00000414963 NRCAMQ92823 1304 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 MAGEB2O15479 319 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 CABYRO75952 493 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 CCL5P13501 91 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 IDEP14735 1019 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 HOXC8P31273 242 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 LRRC41Q15345 812 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 STX1AQ16623 288 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 KIAA0753Q2KHM9 967 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 COBLL1Q53SF7 1204 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 CT47A1Q5JQC4 288 aaPredicted RBP15.8■□□□□ 0.12
SF3B1-204ENST00000414963 ZNF658Q5TYW1 1059 aaPredicted RBP15.8■□□□□ 0.12
SF3B1-204ENST00000414963 MLKLQ8NB16 471 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 SLC7A3Q8WY07 619 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 KIFAP3Q92845 792 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 ZNF333Q96JL9 665 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 DRC1Q96MC2 740 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 C17orf75Q9HAS0 396 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 OLFML3Q9NRN5 406 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 EXOC1Q9NV70 894 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 PCDHA2Q9Y5H9 948 aa15.8■□□□□ 0.12
SF3B1-204ENST00000414963 MOXD2PA6NHM9 499 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 RSPH10B2B2RC85 870 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 BIN1O00499 593 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 HIP1RO75146 1068 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 TBCAO75347 108 aaKnown RBP15.79■□□□□ 0.12
SF3B1-204ENST00000414963 FAM13AO94988 1023 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 CAVIN2O95810 425 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 ASGR1P07306 291 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 RSPH10BP0C881 870 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 POLGP54098 1239 aaPredicted RBP15.79■□□□□ 0.12
SF3B1-204ENST00000414963 RAD51AP2Q09MP3 1159 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 TBC1D8BQ0IIM8 1120 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 COASYQ13057 564 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 PPFIA1Q13136 1202 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 EMC2Q15006 297 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 MTFR1Q15390 333 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 CXCL17Q6UXB2 119 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 NTPCRQ9BSD7 190 aaKnown RBP15.79■□□□□ 0.12
SF3B1-204ENST00000414963 PARVGQ9HBI0 331 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 KCNG1Q9UIX4 513 aa15.79■□□□□ 0.12
SF3B1-204ENST00000414963 C22orf31O95567 290 aa15.78■□□□□ 0.12
SF3B1-204ENST00000414963 SMIM10L2AP0DMW4 78 aa15.78■□□□□ 0.12
SF3B1-204ENST00000414963 SMIM10L2BP0DMW5 78 aa15.78■□□□□ 0.12
SF3B1-204ENST00000414963 MAPTP10636 758 aaKnown RBP15.78■□□□□ 0.12
SF3B1-204ENST00000414963 PLS3P13797 630 aa15.78■□□□□ 0.12
SF3B1-204ENST00000414963 ARL2P36404 184 aa15.78■□□□□ 0.12
SF3B1-204ENST00000414963 ACLYP53396 1101 aa15.78■□□□□ 0.12
SF3B1-204ENST00000414963 ADAM17P78536 824 aa15.78■□□□□ 0.12
SF3B1-204ENST00000414963 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
SF3B1-204ENST00000414963 GRIK4Q16099 956 aa15.78■□□□□ 0.12
SF3B1-204ENST00000414963 HERC4Q5GLZ8 1057 aaPredicted RBP15.78■□□□□ 0.12
SF3B1-204ENST00000414963 MARCH8Q5T0T0 291 aa15.78■□□□□ 0.12
SF3B1-204ENST00000414963 IER5Q5VY09 327 aa15.78■□□□□ 0.12
SF3B1-204ENST00000414963 SESTD1Q86VW0 696 aa15.78■□□□□ 0.12
SF3B1-204ENST00000414963 LINC01465Q8N7H1 131 aa15.78■□□□□ 0.12
SF3B1-204ENST00000414963 KCNN1Q92952 543 aa15.78■□□□□ 0.12
SF3B1-204ENST00000414963 LARSQ9P2J5 1176 aaKnown RBP15.78■□□□□ 0.12
SF3B1-204ENST00000414963 OGDHLQ9ULD0 1010 aa15.78■□□□□ 0.12
SF3B1-204ENST00000414963 MBLAC1A4D2B0 266 aaPredicted RBP15.77■□□□□ 0.12
SF3B1-204ENST00000414963 SFI1A8K8P3 1242 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 GNAT1P11488 350 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 CAPN2P17655 700 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 KLRC1P26715 233 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 PPP1R2P41236 205 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 STK4Q13043 487 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 MKRN4PQ13434 485 aaPredicted RBP15.77■□□□□ 0.12
SF3B1-204ENST00000414963 DPCR1Q3MIW9 517 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 FAM26FQ5R3K3 315 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 FAM102BQ5T8I3 360 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 ISM2Q6H9L7 571 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 MTHFD1LQ6UB35 978 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 MYCT1Q8N699 235 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 RETREG2Q8NC44 543 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 SLC17A8Q8NDX2 589 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 SPIRE2Q8WWL2 714 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 TCP11Q8WWU5 503 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 FIZ1Q96SL8 496 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 CRISPLD2Q9H0B8 497 aa15.77■□□□□ 0.12
SF3B1-204ENST00000414963 RNF208Q9H0X6 261 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms