RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 TPRNQ4KMQ1 711 aa12.91□□□□□ -0.34
HDAC9-206ENST00000413380 ZNF484Q5JVG2 852 aa12.91□□□□□ -0.34
HDAC9-206ENST00000413380 EXOC8Q8IYI6 725 aa12.91□□□□□ -0.34
HDAC9-206ENST00000413380 RUSC1Q9BVN2 902 aa12.91□□□□□ -0.34
HDAC9-206ENST00000413380 RNF208Q9H0X6 261 aa12.91□□□□□ -0.34
HDAC9-206ENST00000413380 SEPT9Q9UHD8 586 aaPredicted RBP12.91□□□□□ -0.34
HDAC9-206ENST00000413380 TUBE1Q9UJT0 475 aa12.91□□□□□ -0.34
HDAC9-206ENST00000413380 ODF2LQ9ULJ1 636 aa12.91□□□□□ -0.34
HDAC9-206ENST00000413380 PHF24Q9UPV7 400 aa12.91□□□□□ -0.34
HDAC9-206ENST00000413380 NRCAMQ92823 1304 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 MBLAC1A4D2B0 266 aaPredicted RBP12.9□□□□□ -0.34
HDAC9-206ENST00000413380 TMEM150BA6NC51 233 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 RRN3P2A6NIE6 340 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 MAFO75444 373 aaPredicted RBP12.9□□□□□ -0.34
HDAC9-206ENST00000413380 SGPL1O95470 568 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 MYL3P08590 195 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 MARK3P27448 753 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 RFC5P40937 340 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 SARSP49591 514 aaKnown RBP12.9□□□□□ -0.34
HDAC9-206ENST00000413380 ZNF131P52739 623 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 ACLYP53396 1101 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 NPEPPSP55786 919 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 EHHADHQ08426 723 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 KIAA0753Q2KHM9 967 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 XKR9Q5GH70 373 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 PLA2G4FQ68DD2 849 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 CAVIN1Q6NZI2 390 aaKnown RBP12.9□□□□□ -0.34
HDAC9-206ENST00000413380 PADI6Q6TGC4 694 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 GPBP1Q86WP2 473 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 CKAP2LQ8IYA6 745 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 LINC01465Q8N7H1 131 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 KCNN1Q92952 543 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 CEP170P1Q96L14 293 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 DEFB118Q96PH6 123 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 SEZ6LQ9BYH1 1024 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 MCOLN1Q9GZU1 580 aa12.9□□□□□ -0.34
HDAC9-206ENST00000413380 A0A087WWV3 80 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 PVALEFA0A1B0GWK0 134 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 MAGEB2O15479 319 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 KLRC4O43908 158 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 C22orf31O95567 290 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 SMIM10L2AP0DMW4 78 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 SMIM10L2BP0DMW5 78 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 INSRRP14616 1297 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 AFMP43652 599 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 GJA8P48165 433 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 RTP1P59025 263 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 PTPN11Q06124 597 aaPredicted RBP12.89□□□□□ -0.35
HDAC9-206ENST00000413380 MAPK7Q13164 816 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 PDAP1Q13442 181 aaKnown RBP12.89□□□□□ -0.35
HDAC9-206ENST00000413380 PNOCQ13519 176 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 CUL4BQ13620 913 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 GIT2Q14161 759 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 KCNB1Q14721 858 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 NFRKBQ6P4R8 1299 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 CXCL17Q6UXB2 119 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 UNC13DQ70J99 1090 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 GRAMD1CQ8IYS0 662 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 DAW1Q8N136 415 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 ANKLE1Q8NAG6 615 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 SLC43A3Q8NBI5 491 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 MCPH1Q8NEM0 835 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 U2AF1L4Q8WU68 220 aaKnown RBP12.89□□□□□ -0.35
HDAC9-206ENST00000413380 DDX12PQ92771 950 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 DCBLD2Q96PD2 775 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 GSDMAQ96QA5 445 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 JPH2Q9BR39 696 aaPredicted RBP12.89□□□□□ -0.35
HDAC9-206ENST00000413380 XPNPEP1Q9NQW7 623 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 BMP2KQ9NSY1 1161 aaPredicted RBP12.89□□□□□ -0.35
HDAC9-206ENST00000413380 KIAA1468Q9P260 1216 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 TRPC6Q9Y210 931 aa12.89□□□□□ -0.35
HDAC9-206ENST00000413380 GRIN2DO15399 1336 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 KBTBD13C9JR72 458 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 RHOBTB3O94955 611 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 LETM1O95202 739 aaPredicted RBP12.88□□□□□ -0.35
HDAC9-206ENST00000413380 SMC2O95347 1197 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 PPFIA1Q13136 1202 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 EMC2Q15006 297 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 GRIK4Q16099 956 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 CAMK4Q16566 473 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 MTERF2Q49AM1 385 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 MARCH8Q5T0T0 291 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 TRIML1Q8N9V2 468 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 SLC7A3Q8WY07 619 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 STAMQ92783 540 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 CCDC43Q96MW1 224 aaKnown RBP12.88□□□□□ -0.35
HDAC9-206ENST00000413380 REEP2Q9BRK0 252 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 C17orf75Q9HAS0 396 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 ATP6V0A4Q9HBG4 840 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 SEL1LQ9UBV2 794 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 GTF2IRD1Q9UHL9 959 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 PCDHA5Q9Y5H7 936 aa12.88□□□□□ -0.35
HDAC9-206ENST00000413380 A0A1W2PQ45 241 aaPredicted RBP12.87□□□□□ -0.35
HDAC9-206ENST00000413380 A0A1W2PQY0 241 aa12.87□□□□□ -0.35
HDAC9-206ENST00000413380 USO1O60763 962 aaKnown RBP12.87□□□□□ -0.35
HDAC9-206ENST00000413380 RPN1P04843 607 aaKnown RBP12.87□□□□□ -0.35
HDAC9-206ENST00000413380 SSBP05455 408 aaKnown RBP eCLIP12.87□□□□□ -0.35
HDAC9-206ENST00000413380 COL6A1P12109 1028 aa12.87□□□□□ -0.35
HDAC9-206ENST00000413380 CASP1P29466 404 aa12.87□□□□□ -0.35
HDAC9-206ENST00000413380 POLGP54098 1239 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms