RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 WRAP73Q9P2S5 460 aaPredicted RBP11.44□□□□□ -0.58
NCKIPSD-202ENST00000413374 VAV3Q9UKW4 847 aa11.44□□□□□ -0.58
NCKIPSD-202ENST00000413374 TANC1Q9C0D5 1861 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 A0A087WWV3 80 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 DENND3A2RUS2 1198 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 ZBTB39O15060 712 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 GPR182O15218 404 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 TXKP42681 527 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 QARSP47897 775 aaKnown RBP11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 NPEPPSP55786 919 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 PSMC5P62195 406 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 CYP4A11Q02928 519 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 PPP2R5CQ13362 524 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 BTG3Q14201 252 aaPredicted RBP11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 EPHA7Q15375 998 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 SAFBQ15424 915 aaKnown RBP eCLIP11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 TARBP2Q15633 366 aaKnown RBP11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 CALCRLQ16602 461 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 EPC2Q52LR7 807 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 ANO5Q75V66 913 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 FAM228AQ86W67 206 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 TPH2Q8IWU9 490 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 TMEM192Q8IY95 271 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 SP7Q8TDD2 431 aaPredicted RBP11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 NLRP7Q8WX94 980 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 MAP7D2Q96T17 732 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 ADAM2Q99965 735 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 LLPHQ9BRT6 129 aaKnown RBP11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 FTHL17Q9BXU8 183 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 NIFKQ9BYG3 293 aaKnown RBP11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 ADAMTS10Q9H324 1103 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 LRFN2Q9ULH4 789 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 SQORQ9Y6N5 450 aa11.43□□□□□ -0.58
NCKIPSD-202ENST00000413374 KDM3AQ9Y4C1 1321 aa11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 TBX3O15119 743 aa11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 DGKIO75912 1065 aa11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 P4HBP07237 508 aaKnown RBP11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 MCM7P33993 719 aa11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 GPM6BQ13491 265 aa11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 GNL2Q13823 731 aaKnown RBP11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 RABEP1Q15276 862 aa11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 ZNF174Q15697 407 aa11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 KSR1Q8IVT5 923 aa11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 SLFN12Q8IYM2 578 aa11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 LINC01465Q8N7H1 131 aa11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 CEP170P1Q96L14 293 aa11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 COL25A1Q9BXS0 654 aaPredicted RBP11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 TSPYL2Q9H2G4 693 aaPredicted RBP11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 TMEM60Q9H2L4 133 aa11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 UPF2Q9HAU5 1272 aaKnown RBP11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 SH2B1Q9NRF2 756 aaPredicted RBP11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 SUCLA2Q9P2R7 463 aaPredicted RBP11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 PCDHA12Q9UN75 941 aa11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 PCDHB7Q9Y5E2 793 aa11.42□□□□□ -0.58
NCKIPSD-202ENST00000413374 A0A087WZ62 844 aa11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 NEMFO60524 1076 aa11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 SLITRK3O94933 977 aa11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 CD2BP2O95400 341 aaKnown RBP11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 STAG3L1P0CL83 205 aa11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 CTNNB1P35222 781 aa11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 GPC3P51654 580 aa11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 TFF2Q03403 129 aa11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 FAM102BQ5T8I3 360 aa11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 RHPN2Q8IUC4 686 aa11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 NPAS4Q8IUM7 802 aa11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 TMEM143Q96AN5 459 aa11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 ZNF689Q96CS4 500 aaPredicted RBP11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 CEP89Q96ST8 783 aa11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 EIF2AK1Q9BQI3 630 aaKnown RBP11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 FDXACB1Q9BRP7 624 aaPredicted RBP11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 LXNQ9BS40 222 aa11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 TTC12Q9H892 705 aaPredicted RBP11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 CYP26B1Q9NR63 512 aa11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 RGS18Q9NS28 235 aa11.41□□□□□ -0.58
NCKIPSD-202ENST00000413374 ST18O60284 1047 aa11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 MAFO75444 373 aaPredicted RBP11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 FGFR1P11362 822 aa11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 POU3F3P20264 500 aaPredicted RBP11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 EIF4BP23588 611 aaKnown RBP11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 YWHABP31946 246 aaKnown RBP11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 BMPR1AP36894 532 aa11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 SARSP49591 514 aaKnown RBP11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 DNM2P50570 870 aa11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 HMGN5P82970 282 aaKnown RBP11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 SPIRE1Q08AE8 756 aa11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 NBR1Q14596 966 aa11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 XKR9Q5GH70 373 aa11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 ODR4Q5SWX8 454 aa11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 SLC24A5Q71RS6 500 aa11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 RNF169Q8NCN4 708 aa11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 FBXO18Q8NFZ0 1043 aa11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 NLRP4Q96MN2 994 aa11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 THEGQ9P2T0 379 aa11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 MRPL42Q9Y6G3 142 aaKnown RBP11.4□□□□□ -0.58
NCKIPSD-202ENST00000413374 EYSQ5T1H1 3165 aa11.4□□□□□ -0.59
NCKIPSD-202ENST00000413374 ADGRA3Q8IWK6 1321 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 IGKV6-21A0A0C4DH24 114 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 TBKBP1A7MCY6 615 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 C9IYK1 514 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 H3BNC9 293 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms