RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 SF3B2Q13435 895 aaKnown RBP18.02■□□□□ 0.48
HCG18-233ENST00000412685 ZNF571Q7Z3V5 609 aaPredicted RBP18.02■□□□□ 0.48
HCG18-233ENST00000412685 RBM46Q8TBY0 533 aaKnown RBP18.02■□□□□ 0.48
HCG18-233ENST00000412685 PACSIN1Q9BY11 444 aa18.02■□□□□ 0.48
HCG18-233ENST00000412685 SLC38A10Q9HBR0 1119 aa18.02■□□□□ 0.48
HCG18-233ENST00000412685 RAVER2Q9HCJ3 691 aaKnown RBP18.02■□□□□ 0.48
HCG18-233ENST00000412685 HOMER2Q9NSB8 354 aa18.02■□□□□ 0.48
HCG18-233ENST00000412685 DHX15O43143 795 aaKnown RBP18.02■□□□□ 0.47
HCG18-233ENST00000412685 HIP1RO75146 1068 aa18.02■□□□□ 0.47
HCG18-233ENST00000412685 ZNF280AP59817 542 aaPredicted RBP18.02■□□□□ 0.47
HCG18-233ENST00000412685 TNIP1Q15025 636 aa18.02■□□□□ 0.47
HCG18-233ENST00000412685 TKFCQ3LXA3 575 aa18.02■□□□□ 0.47
HCG18-233ENST00000412685 PDE11AQ9HCR9 933 aa18.02■□□□□ 0.47
HCG18-233ENST00000412685 AGPAT3Q9NRZ7 376 aa18.02■□□□□ 0.47
HCG18-233ENST00000412685 TSKSQ9UJT2 592 aa18.02■□□□□ 0.47
HCG18-233ENST00000412685 H3BQF6 201 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 EIF3JO75822 258 aaKnown RBP18.01■□□□□ 0.47
HCG18-233ENST00000412685 MAPK7Q13164 816 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 PCNX4Q63HM2 1172 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 DAW1Q8N136 415 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 MMGT1Q8N4V1 131 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 SPATA4Q8NEY3 305 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 UBIAD1Q9Y5Z9 338 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 PALMO75781 387 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 PRKCIP41743 596 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 JAM2P57087 298 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 TGFB2P61812 414 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 MRPS9P82933 396 aaKnown RBP18.01■□□□□ 0.47
HCG18-233ENST00000412685 GPS2Q13227 327 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 ITGB3BPQ13352 177 aaPredicted RBP18.01■□□□□ 0.47
HCG18-233ENST00000412685 MAP9Q49MG5 647 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 DALRD3Q5D0E6 543 aaKnown RBP18.01■□□□□ 0.47
HCG18-233ENST00000412685 MUM1L1Q5H9M0 696 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 CCDC181Q5TID7 509 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 PADI6Q6TGC4 694 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 SYTL5Q8TDW5 730 aaPredicted RBP18.01■□□□□ 0.47
HCG18-233ENST00000412685 AGO4Q9HCK5 861 aaKnown RBP18.01■□□□□ 0.47
HCG18-233ENST00000412685 DMAC2Q9NW81 257 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 AJAP1Q9UKB5 411 aaPredicted RBP18.01■□□□□ 0.47
HCG18-233ENST00000412685 PCDHGC5Q9Y5F6 944 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 LOXHD1Q8IVV2 1947 aa18.01■□□□□ 0.47
HCG18-233ENST00000412685 CTNND1O60716 968 aaKnown RBP18■□□□□ 0.47
HCG18-233ENST00000412685 ZMYND10O75800 440 aa18■□□□□ 0.47
HCG18-233ENST00000412685 FLOT1O75955 427 aa18■□□□□ 0.47
HCG18-233ENST00000412685 P4HBP07237 508 aaKnown RBP18■□□□□ 0.47
HCG18-233ENST00000412685 CYP2J2P51589 502 aa18■□□□□ 0.47
HCG18-233ENST00000412685 C10orf76Q5T2E6 689 aa18■□□□□ 0.47
HCG18-233ENST00000412685 CCDC70Q6NSX1 233 aa18■□□□□ 0.47
HCG18-233ENST00000412685 FRMD4BQ9Y2L6 1034 aa18■□□□□ 0.47
HCG18-233ENST00000412685 FER1L6Q2WGJ9 1857 aa18■□□□□ 0.47
HCG18-233ENST00000412685 MYH11P35749 1972 aa18■□□□□ 0.47
HCG18-233ENST00000412685 PPP1R37O75864 691 aa18■□□□□ 0.47
HCG18-233ENST00000412685 MTMR1Q13613 665 aa18■□□□□ 0.47
HCG18-233ENST00000412685 GJB7Q6PEY0 223 aa18■□□□□ 0.47
HCG18-233ENST00000412685 GOLGA5Q8TBA6 731 aa18■□□□□ 0.47
HCG18-233ENST00000412685 STRA6Q9BX79 667 aa18■□□□□ 0.47
HCG18-233ENST00000412685 GINM1Q9NU53 330 aa18■□□□□ 0.47
HCG18-233ENST00000412685 SMARCAL1Q9NZC9 954 aa18■□□□□ 0.47
HCG18-233ENST00000412685 ZHX2Q9Y6X8 837 aa18■□□□□ 0.47
HCG18-233ENST00000412685 VCAM1P19320 739 aa17.99■□□□□ 0.47
HCG18-233ENST00000412685 MTMR2Q13614 643 aa17.99■□□□□ 0.47
HCG18-233ENST00000412685 EHD2Q9NZN4 543 aa17.99■□□□□ 0.47
HCG18-233ENST00000412685 PPP1R9AQ9ULJ8 1098 aa17.99■□□□□ 0.47
HCG18-233ENST00000412685 SAMM50Q9Y512 469 aa17.99■□□□□ 0.47
HCG18-233ENST00000412685 LRRIQ3A6PVS8 624 aaPredicted RBP17.99■□□□□ 0.47
HCG18-233ENST00000412685 PAFAH1B1P43034 410 aa17.99■□□□□ 0.47
HCG18-233ENST00000412685 FMO5P49326 533 aa17.99■□□□□ 0.47
HCG18-233ENST00000412685 RPS6P62753 249 aaKnown RBP17.99■□□□□ 0.47
HCG18-233ENST00000412685 MAP3K20Q9NYL2 800 aaKnown RBP17.99■□□□□ 0.47
HCG18-233ENST00000412685 NAGPAQ9UK23 515 aa17.99■□□□□ 0.47
HCG18-233ENST00000412685 BTNL10A8MVZ5 291 aa17.98■□□□□ 0.47
HCG18-233ENST00000412685 NFKBIEO00221 500 aa17.98■□□□□ 0.47
HCG18-233ENST00000412685 FTCDO95954 541 aa17.98■□□□□ 0.47
HCG18-233ENST00000412685 EIF2AK2P19525 551 aaKnown RBP17.98■□□□□ 0.47
HCG18-233ENST00000412685 RPS12P25398 132 aaKnown RBP17.98■□□□□ 0.47
HCG18-233ENST00000412685 ANXA13P27216 316 aa17.98■□□□□ 0.47
HCG18-233ENST00000412685 MAEAQ7L5Y9 396 aa17.98■□□□□ 0.47
HCG18-233ENST00000412685 SYCP3Q8IZU3 236 aa17.98■□□□□ 0.47
HCG18-233ENST00000412685 TAAR1Q96RJ0 339 aa17.98■□□□□ 0.47
HCG18-233ENST00000412685 K7ENM7 598 aa17.98■□□□□ 0.47
HCG18-233ENST00000412685 QARSP47897 775 aaKnown RBP17.98■□□□□ 0.47
HCG18-233ENST00000412685 PLS1Q14651 629 aa17.98■□□□□ 0.47
HCG18-233ENST00000412685 ALKBH5Q6P6C2 394 aaKnown RBP17.98■□□□□ 0.47
HCG18-233ENST00000412685 CCNI2Q6ZMN8 369 aaPredicted RBP17.98■□□□□ 0.47
HCG18-233ENST00000412685 SLC9A9Q8IVB4 645 aa17.98■□□□□ 0.47
HCG18-233ENST00000412685 LARSQ9P2J5 1176 aaKnown RBP17.98■□□□□ 0.47
HCG18-233ENST00000412685 DBR1Q9UK59 544 aaKnown RBP17.98■□□□□ 0.47
HCG18-233ENST00000412685 ASTN2O75129 1339 aaPredicted RBP17.98■□□□□ 0.47
HCG18-233ENST00000412685 MATR3P43243 847 aaKnown RBP eCLIP17.97■□□□□ 0.471e-6■■■□□ 14.6
HCG18-233ENST00000412685 RARRES1P49788 294 aa17.97■□□□□ 0.47
HCG18-233ENST00000412685 PPP2R5AQ15172 486 aa17.97■□□□□ 0.47
HCG18-233ENST00000412685 MEI1Q5TIA1 1274 aa17.97■□□□□ 0.47
HCG18-233ENST00000412685 LRRC1Q9BTT6 524 aa17.97■□□□□ 0.47
HCG18-233ENST00000412685 RPAP3Q9H6T3 665 aaPredicted RBP17.97■□□□□ 0.47
HCG18-233ENST00000412685 TBC1D22BQ9NU19 505 aa17.97■□□□□ 0.47
HCG18-233ENST00000412685 RNF14Q9UBS8 474 aa17.97■□□□□ 0.47
HCG18-233ENST00000412685 GRID2IPA4D2P6 1211 aa17.97■□□□□ 0.47
HCG18-233ENST00000412685 MYBL2P10244 700 aa17.97■□□□□ 0.47
HCG18-233ENST00000412685 PGM5Q15124 567 aa17.97■□□□□ 0.47
HCG18-233ENST00000412685 CFAP221Q4G0U5 840 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms