RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 BMP8BP34820 402 aa15.57■□□□□ 0.08
CPNE1-206ENST00000412056 LONP1P36776 959 aaKnown RBP15.57■□□□□ 0.08
CPNE1-206ENST00000412056 RARRES1P49788 294 aa15.57■□□□□ 0.08
CPNE1-206ENST00000412056 GRB10Q13322 594 aa15.57■□□□□ 0.08
CPNE1-206ENST00000412056 ZRSR1Q15695 479 aaKnown RBP15.57■□□□□ 0.08
CPNE1-206ENST00000412056 SPECC1Q5M775 1068 aa15.57■□□□□ 0.08
CPNE1-206ENST00000412056 C16orf59Q7L2K0 433 aa15.57■□□□□ 0.08
CPNE1-206ENST00000412056 AK8Q96MA6 479 aa15.57■□□□□ 0.08
CPNE1-206ENST00000412056 CCDC43Q96MW1 224 aaKnown RBP15.57■□□□□ 0.08
CPNE1-206ENST00000412056 PNMA5Q96PV4 448 aa15.57■□□□□ 0.08
CPNE1-206ENST00000412056 CSRNP2Q9H175 543 aa15.57■□□□□ 0.08
CPNE1-206ENST00000412056 DHX33Q9H6R0 707 aaKnown RBP15.57■□□□□ 0.08
CPNE1-206ENST00000412056 KIAA1024Q9UPX6 916 aa15.57■□□□□ 0.08
CPNE1-206ENST00000412056 COLQQ9Y215 455 aaPredicted RBP15.57■□□□□ 0.08
CPNE1-206ENST00000412056 SRPRBQ9Y5M8 271 aaKnown RBP15.57■□□□□ 0.08
CPNE1-206ENST00000412056 TRPV2Q9Y5S1 764 aa15.57■□□□□ 0.08
CPNE1-206ENST00000412056 SPTLC2O15270 562 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 MAFO75444 373 aaPredicted RBP15.56■□□□□ 0.08
CPNE1-206ENST00000412056 RFC2P35250 354 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 RFC5P40937 340 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 POLGP54098 1239 aaPredicted RBP15.56■□□□□ 0.08
CPNE1-206ENST00000412056 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
CPNE1-206ENST00000412056 EMC2Q15006 297 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 TMEM240Q5SV17 173 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 C9orf50Q5SZB4 431 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 HYIQ5T013 277 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 ATL3Q6DD88 541 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 USP49Q70CQ1 688 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 KCNK18Q7Z418 384 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 CABP7Q86V35 215 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 KRI1Q8N9T8 703 aaKnown RBP15.56■□□□□ 0.08
CPNE1-206ENST00000412056 NACC1Q96RE7 527 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 MAP7D2Q96T17 732 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 PLIN2Q99541 437 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.56■□□□□ 0.085e-13■■■■■ 64.1
CPNE1-206ENST00000412056 XPNPEP1Q9NQW7 623 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 DBR1Q9UK59 544 aaKnown RBP15.56■□□□□ 0.08
CPNE1-206ENST00000412056 AKT3Q9Y243 479 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 PPME1Q9Y570 386 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 KDM3AQ9Y4C1 1321 aa15.56■□□□□ 0.08
CPNE1-206ENST00000412056 E9PMD0 336 aa15.55■□□□□ 0.08
CPNE1-206ENST00000412056 M0QZ92 97 aa15.55■□□□□ 0.08
CPNE1-206ENST00000412056 USO1O60763 962 aaKnown RBP15.55■□□□□ 0.08
CPNE1-206ENST00000412056 PARNO95453 639 aaKnown RBP15.55■□□□□ 0.08
CPNE1-206ENST00000412056 CXCL10P02778 98 aa15.55■□□□□ 0.08
CPNE1-206ENST00000412056 RPLP2P05387 115 aaKnown RBP15.55■□□□□ 0.08
CPNE1-206ENST00000412056 XRCC6P12956 609 aaKnown RBP eCLIP15.55■□□□□ 0.08
CPNE1-206ENST00000412056 NCLP19338 710 aaKnown RBP15.55■□□□□ 0.08
CPNE1-206ENST00000412056 TMOD1P28289 359 aa15.55■□□□□ 0.08
CPNE1-206ENST00000412056 NUCB2P80303 420 aa15.55■□□□□ 0.08
CPNE1-206ENST00000412056 SHHQ15465 462 aa15.55■□□□□ 0.08
CPNE1-206ENST00000412056 TCTN1Q2MV58 587 aa15.55■□□□□ 0.08
CPNE1-206ENST00000412056 TMEM119Q4V9L6 283 aa15.55■□□□□ 0.08
CPNE1-206ENST00000412056 ZNF365Q70YC5 407 aa15.55■□□□□ 0.08
CPNE1-206ENST00000412056 NME8Q8N427 588 aa15.55■□□□□ 0.08
CPNE1-206ENST00000412056 SLC7A3Q8WY07 619 aa15.55■□□□□ 0.08
CPNE1-206ENST00000412056 ZNF668Q96K58 619 aaPredicted RBP15.55■□□□□ 0.08
CPNE1-206ENST00000412056 MTRQ99707 1265 aa15.55■□□□□ 0.08
CPNE1-206ENST00000412056 CELF4Q9BZC1 486 aaKnown RBP15.55■□□□□ 0.08
CPNE1-206ENST00000412056 CDHR5Q9HBB8 845 aa15.55■□□□□ 0.08
CPNE1-206ENST00000412056 RBM19Q9Y4C8 960 aaKnown RBP15.55■□□□□ 0.08
CPNE1-206ENST00000412056 PPP6R2O75170 966 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 PFKMP08237 780 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 GHRP10912 638 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 UBA7P41226 1012 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 KARSQ15046 597 aaKnown RBP15.54■□□□□ 0.08
CPNE1-206ENST00000412056 KIZQ2M2Z5 673 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 FBXO47Q5MNV8 452 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 IER5Q5VY09 327 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 PSRC1Q6PGN9 363 aaPredicted RBP15.54■□□□□ 0.08
CPNE1-206ENST00000412056 RPUSD2Q8IZ73 545 aaKnown RBP15.54■□□□□ 0.08
CPNE1-206ENST00000412056 LRRC15Q8TF66 581 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 SYMPKQ92797 1274 aaKnown RBP15.54■□□□□ 0.08
CPNE1-206ENST00000412056 TMEM143Q96AN5 459 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 EPSTI1Q96J88 318 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 CDK5RAP3Q96JB5 506 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 JPH2Q9BR39 696 aaPredicted RBP15.54■□□□□ 0.08
CPNE1-206ENST00000412056 CCSER1Q9C0I3 900 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 BHMT2Q9H2M3 363 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 ATP6V0A4Q9HBG4 840 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 CFAP45Q9UL16 551 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 GINS2Q9Y248 185 aa15.54■□□□□ 0.08
CPNE1-206ENST00000412056 ARHGEF35A5YM69 484 aa15.53■□□□□ 0.08
CPNE1-206ENST00000412056 GPR32O75388 356 aa15.53■□□□□ 0.08
CPNE1-206ENST00000412056 DGAT1O75907 488 aa15.53■□□□□ 0.08
CPNE1-206ENST00000412056 EYA4O95677 639 aa15.53■□□□□ 0.08
CPNE1-206ENST00000412056 PLCG1P19174 1290 aa15.53■□□□□ 0.08
CPNE1-206ENST00000412056 GPC3P51654 580 aa15.53■□□□□ 0.08
CPNE1-206ENST00000412056 NLRP11P59045 1033 aaKnown RBP15.53■□□□□ 0.08
CPNE1-206ENST00000412056 KRT85P78386 507 aa15.53■□□□□ 0.08
CPNE1-206ENST00000412056 LPIN1Q14693 890 aa15.53■□□□□ 0.08
CPNE1-206ENST00000412056 PADI6Q6TGC4 694 aa15.53■□□□□ 0.08
CPNE1-206ENST00000412056 OTOP2Q7RTS6 562 aa15.53■□□□□ 0.08
CPNE1-206ENST00000412056 TMEM40Q8WWA1 233 aa15.53■□□□□ 0.08
CPNE1-206ENST00000412056 CALML4Q96GE6 196 aa15.53■□□□□ 0.08
CPNE1-206ENST00000412056 OSMRQ99650 979 aa15.53■□□□□ 0.08
CPNE1-206ENST00000412056 NT5C3AQ9H0P0 336 aa15.53■□□□□ 0.08
CPNE1-206ENST00000412056 ADAMTS10Q9H324 1103 aa15.53■□□□□ 0.08
CPNE1-206ENST00000412056 SUCLA2Q9P2R7 463 aaPredicted RBP15.53■□□□□ 0.08
CPNE1-206ENST00000412056 ATP6V1DQ9Y5K8 247 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms