RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 NDUFA8P51970 172 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 SKOR1P84550 965 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 SYTL3Q4VX76 610 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 PYROXD1Q8WU10 500 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 SIK2Q9H0K1 926 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 INTS9Q9NV88 658 aaKnown RBP12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 SERPINB13Q9UIV8 391 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 LRRD1A4D1F6 860 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 VGLL3A8MV65 326 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 BTBD18B2RXH4 712 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 CLDN3O15551 220 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 APOA4P06727 396 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 HSPA1AP0DMV8 641 aaKnown RBP12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 HSPA1BP0DMV9 641 aaKnown RBP12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 ST8SIA6P61647 398 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 SURF1Q15526 300 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 SPDYAQ5MJ70 313 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 PIGOQ8TEQ8 1089 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 KDM4CQ9H3R0 1056 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 SUN1O94901 812 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 USP17L8P0C7I0 530 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 LONP1P36776 959 aaKnown RBP12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 CACNB3P54284 484 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 ANKRD13CQ8N6S4 541 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 SPATA33Q96N06 139 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 ABCB11O95342 1321 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 SOS2Q07890 1332 aaPredicted RBP12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 BRD2P25440 801 aaKnown RBP12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 PSMC5P62195 406 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 BEST2Q8NFU1 509 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 TTC8Q8TAM2 541 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 MAN1C1Q9NR34 630 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 SEL1LQ9UBV2 794 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 LCP1P13796 627 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 C2orf54Q08AI8 447 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 ANKRD40Q6AI12 368 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 HIPK4Q8NE63 616 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 CCDC17Q96LX7 622 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 STK17AQ9UEE5 414 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 KDM5CP41229 1560 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 LRRC74AQ0VAA2 488 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 PKN3Q6P5Z2 889 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 THNSL1Q8IYQ7 743 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 RNF168Q8IYW5 571 aaPredicted RBP12□□□□□ -0.49
PRPF40A-202ENST00000410080 CYTH2Q99418 400 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 CAPS2Q9BXY5 557 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 C2CD2LO14523 706 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 PFDN1O60925 122 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 HSPA4LO95757 839 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 CUL1Q13616 776 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 RMDN1Q96DB5 314 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 EXOC1LA0A1B0GW35 172 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 FCER1AP12319 257 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 FAM81BQ96LP2 452 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 PIGSQ96S52 555 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 TRPV6Q9H1D0 765 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 UPF3AQ9H1J1 476 aaKnown RBP12□□□□□ -0.49
PRPF40A-202ENST00000410080 RAVER2Q9HCJ3 691 aaKnown RBP12□□□□□ -0.49
PRPF40A-202ENST00000410080 GINM1Q9NU53 330 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 CACNA2D2Q9NY47 1150 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 MYH9P35579 1960 aaKnown RBP12□□□□□ -0.49
PRPF40A-202ENST00000410080 GPC3P51654 580 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 TTLL4Q14679 1199 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 ENOX1Q8TC92 643 aaKnown RBP12□□□□□ -0.49
PRPF40A-202ENST00000410080 ABTB1Q969K4 478 aaPredicted RBP12□□□□□ -0.49
PRPF40A-202ENST00000410080 SMAD5Q99717 465 aaKnown RBP12□□□□□ -0.49
PRPF40A-202ENST00000410080 KANSL2Q9H9L4 492 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 EFCAB6Q5THR3 1501 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 H2AFZP0C0S5 128 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 PHKA2P46019 1235 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 FAM83BQ5T0W9 1011 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 H2AFVQ71UI9 128 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 OR6J1Q8NGC5 347 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 PPP1R14AQ96A00 147 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 ZNF274Q96GC6 653 aaPredicted RBP12□□□□□ -0.49
PRPF40A-202ENST00000410080 ZMAT2Q96NC0 199 aaKnown RBP12□□□□□ -0.49
PRPF40A-202ENST00000410080 TUBGCP2Q9BSJ2 902 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12□□□□□ -0.49
PRPF40A-202ENST00000410080 EFCAB8A8MWE9 144 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 ENC1O14682 589 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 ZMYND10O75800 440 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 PDE8BO95263 885 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 ARHGAP18Q8N392 663 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 OTUB1Q96FW1 271 aaPredicted RBP12□□□□□ -0.49
PRPF40A-202ENST00000410080 SERPINI1Q99574 410 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 BUD13Q9BRD0 619 aaKnown RBP eCLIP12□□□□□ -0.492e-9■□□□□ 10.7
PRPF40A-202ENST00000410080 PCDHB7Q9Y5E2 793 aa12□□□□□ -0.49
PRPF40A-202ENST00000410080 CYBBP04839 570 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 MMP10P09238 476 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 PLTPP55058 493 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 FAM133BQ5BKY9 247 aaKnown RBP11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 USP28Q96RU2 1077 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 KLC2Q9H0B6 622 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 MYO1DO94832 1006 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 CDC37Q16543 378 aaPredicted RBP11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 CHMP1BQ7LBR1 199 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 LCORLQ8N3X6 602 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 PHF21AQ96BD5 680 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 ATXN7L3BQ96GX2 97 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 RMDN3Q96TC7 470 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms