RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 MYOGP15173 224 aa21.35■■□□□ 1.01
PPM1B-207ENST00000409486 NFX1Q12986 1120 aaKnown RBP21.35■■□□□ 1.01
PPM1B-207ENST00000409486 RESTQ13127 1097 aa21.35■■□□□ 1.01
PPM1B-207ENST00000409486 IL17AQ16552 155 aa21.35■■□□□ 1.01
PPM1B-207ENST00000409486 FBXO47Q5MNV8 452 aa21.35■■□□□ 1.01
PPM1B-207ENST00000409486 DTHD1Q6ZMT9 781 aa21.35■■□□□ 1.01
PPM1B-207ENST00000409486 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.35■■□□□ 1.015e-9■■■■■ 29
PPM1B-207ENST00000409486 OTUD6AQ7L8S5 288 aa21.35■■□□□ 1.01
PPM1B-207ENST00000409486 C4orf19Q8IY42 314 aa21.35■■□□□ 1.01
PPM1B-207ENST00000409486 NLRP7Q8WX94 980 aa21.35■■□□□ 1.01
PPM1B-207ENST00000409486 UPP2O95045 317 aa21.34■■□□□ 1.01
PPM1B-207ENST00000409486 NLRP11P59045 1033 aaKnown RBP21.34■■□□□ 1.01
PPM1B-207ENST00000409486 WDR5P61964 334 aaKnown RBP21.34■■□□□ 1.01
PPM1B-207ENST00000409486 TARBP2Q15633 366 aaKnown RBP21.34■■□□□ 1.01
PPM1B-207ENST00000409486 PLEKHG4Q58EX7 1191 aa21.34■■□□□ 1.01
PPM1B-207ENST00000409486 MAEAQ7L5Y9 396 aa21.34■■□□□ 1.01
PPM1B-207ENST00000409486 CATSPER3Q86XQ3 398 aa21.34■■□□□ 1.01
PPM1B-207ENST00000409486 MYOCDQ8IZQ8 938 aa21.34■■□□□ 1.01
PPM1B-207ENST00000409486 SNX29Q8TEQ0 813 aa21.34■■□□□ 1.01
PPM1B-207ENST00000409486 TMEM143Q96AN5 459 aa21.34■■□□□ 1.01
PPM1B-207ENST00000409486 ZBED2Q9BTP6 218 aa21.34■■□□□ 1.01
PPM1B-207ENST00000409486 AGO3Q9H9G7 860 aaKnown RBP21.34■■□□□ 1.01
PPM1B-207ENST00000409486 PTPRSQ13332 1948 aa21.34■■□□□ 1.01
PPM1B-207ENST00000409486 MICAL3Q7RTP6 2002 aa21.33■■□□□ 1.01
PPM1B-207ENST00000409486 PAK2Q13177 524 aa21.33■■□□□ 1.01
PPM1B-207ENST00000409486 SF3A1Q15459 793 aaKnown RBP21.33■■□□□ 1.01
PPM1B-207ENST00000409486 RASIP1Q5U651 963 aa21.33■■□□□ 1.01
PPM1B-207ENST00000409486 RPAINQ86UA6 219 aa21.33■■□□□ 1.01
PPM1B-207ENST00000409486 RHPN2Q8IUC4 686 aa21.33■■□□□ 1.01
PPM1B-207ENST00000409486 NME8Q8N427 588 aa21.33■■□□□ 1.01
PPM1B-207ENST00000409486 NEK9Q8TD19 979 aa21.33■■□□□ 1.01
PPM1B-207ENST00000409486 SLC7A3Q8WY07 619 aa21.33■■□□□ 1.01
PPM1B-207ENST00000409486 NLRP4Q96MN2 994 aa21.33■■□□□ 1.01
PPM1B-207ENST00000409486 PLIN2Q99541 437 aa21.33■■□□□ 1.01
PPM1B-207ENST00000409486 HSD17B14Q9BPX1 270 aa21.33■■□□□ 1.01
PPM1B-207ENST00000409486 SUCLA2Q9P2R7 463 aaPredicted RBP21.33■■□□□ 1.01
PPM1B-207ENST00000409486 CLIC4Q9Y696 253 aa21.33■■□□□ 1.01
PPM1B-207ENST00000409486 LAMA3Q16787 3333 aa21.33■■□□□ 1.01
PPM1B-207ENST00000409486 USO1O60763 962 aaKnown RBP21.32■■□□□ 1
PPM1B-207ENST00000409486 CSDE1O75534 798 aaKnown RBP21.32■■□□□ 1
PPM1B-207ENST00000409486 BAIAP3O94812 1187 aa21.32■■□□□ 1
PPM1B-207ENST00000409486 SPATA31C1P0DKV0 1188 aa21.32■■□□□ 1
PPM1B-207ENST00000409486 FGFR4P22455 802 aa21.32■■□□□ 1
PPM1B-207ENST00000409486 DNM2P50570 870 aa21.32■■□□□ 1
PPM1B-207ENST00000409486 FXR2P51116 673 aaKnown RBP eCLIP21.32■■□□□ 17e-8■■□□□ 11.9
PPM1B-207ENST00000409486 ATP2C1P98194 919 aaPredicted RBP21.32■■□□□ 1
PPM1B-207ENST00000409486 TSHZ1Q6ZSZ6 1077 aa21.32■■□□□ 1
PPM1B-207ENST00000409486 KSR1Q8IVT5 923 aa21.32■■□□□ 1
PPM1B-207ENST00000409486 TMEM40Q8WWA1 233 aa21.32■■□□□ 1
PPM1B-207ENST00000409486 PBX4Q9BYU1 374 aa21.32■■□□□ 1
PPM1B-207ENST00000409486 RAB34Q9BZG1 259 aa21.32■■□□□ 1
PPM1B-207ENST00000409486 NKX2-4Q9H2Z4 354 aa21.32■■□□□ 1
PPM1B-207ENST00000409486 DNAJB2P25686 324 aa21.32■■□□□ 1
PPM1B-207ENST00000409486 MKRN4PQ13434 485 aaPredicted RBP21.32■■□□□ 1
PPM1B-207ENST00000409486 EMC2Q15006 297 aa21.32■■□□□ 1
PPM1B-207ENST00000409486 HAUS3Q68CZ6 603 aa21.32■■□□□ 1
PPM1B-207ENST00000409486 TUFT1Q9NNX1 390 aa21.32■■□□□ 1
PPM1B-207ENST00000409486 DAXXQ9UER7 740 aaPredicted RBP21.32■■□□□ 1
PPM1B-207ENST00000409486 MSRAQ9UJ68 235 aa21.32■■□□□ 1
PPM1B-207ENST00000409486 NOC2LQ9Y3T9 749 aaKnown RBP21.32■■□□□ 1
PPM1B-207ENST00000409486 ABHD14A-ACY1A0A1B0GW23 586 aa21.31■■□□□ 1
PPM1B-207ENST00000409486 LAD1O00515 517 aa21.31■■□□□ 1
PPM1B-207ENST00000409486 MAFO75444 373 aaPredicted RBP21.31■■□□□ 1
PPM1B-207ENST00000409486 RPS6KA5O75582 802 aa21.31■■□□□ 1
PPM1B-207ENST00000409486 AMHP03971 560 aa21.31■■□□□ 1
PPM1B-207ENST00000409486 RPLP2P05387 115 aaKnown RBP21.31■■□□□ 1
PPM1B-207ENST00000409486 SMAD3P84022 425 aaKnown RBP21.31■■□□□ 1
PPM1B-207ENST00000409486 ECM1Q16610 540 aa21.31■■□□□ 1
PPM1B-207ENST00000409486 CEP89Q96ST8 783 aa21.31■■□□□ 1
PPM1B-207ENST00000409486 SLC9A7Q96T83 725 aa21.31■■□□□ 1
PPM1B-207ENST00000409486 PADI3Q9ULW8 664 aa21.31■■□□□ 1
PPM1B-207ENST00000409486 KIAA1024Q9UPX6 916 aa21.31■■□□□ 1
PPM1B-207ENST00000409486 YBX2Q9Y2T7 364 aaKnown RBP21.31■■□□□ 1
PPM1B-207ENST00000409486 GPR32O75388 356 aa21.3■■□□□ 1
PPM1B-207ENST00000409486 MARCKSP29966 332 aaPredicted RBP21.3■■□□□ 1
PPM1B-207ENST00000409486 PKP1Q13835 747 aa21.3■■□□□ 1
PPM1B-207ENST00000409486 ZNF697Q5TEC3 545 aa21.3■■□□□ 1
PPM1B-207ENST00000409486 KRT79Q5XKE5 535 aa21.3■■□□□ 1
PPM1B-207ENST00000409486 DEFB123Q8N688 67 aa21.3■■□□□ 1
PPM1B-207ENST00000409486 LINC01465Q8N7H1 131 aa21.3■■□□□ 1
PPM1B-207ENST00000409486 TIFAQ96CG3 184 aa21.3■■□□□ 1
PPM1B-207ENST00000409486 MTRQ99707 1265 aa21.3■■□□□ 1
PPM1B-207ENST00000409486 POLR3CQ9BUI4 534 aaPredicted RBP21.3■■□□□ 1
PPM1B-207ENST00000409486 DDX19AQ9NUU7 478 aaKnown RBP21.3■■□□□ 1
PPM1B-207ENST00000409486 MYH15Q9Y2K3 1946 aa21.3■■□□□ 1
PPM1B-207ENST00000409486 LAMA2P24043 3122 aaKnown RBP21.29■■□□□ 1
PPM1B-207ENST00000409486 TLL1O43897 1013 aa21.29■■□□□ 1
PPM1B-207ENST00000409486 SRGAP2CP0DJJ0 459 aa21.29■■□□□ 1
PPM1B-207ENST00000409486 RFC5P40937 340 aa21.29■■□□□ 1
PPM1B-207ENST00000409486 PRPHP41219 470 aa21.29■■□□□ 1
PPM1B-207ENST00000409486 GPC3P51654 580 aa21.29■■□□□ 1
PPM1B-207ENST00000409486 CRYBB1P53674 252 aaPredicted RBP21.29■■□□□ 1
PPM1B-207ENST00000409486 HERC6Q8IVU3 1022 aa21.29■■□□□ 1
PPM1B-207ENST00000409486 RASSF8Q8NHQ8 419 aa21.29■■□□□ 1
PPM1B-207ENST00000409486 APBB2Q92870 758 aa21.29■■□□□ 1
PPM1B-207ENST00000409486 A0A087WZ62 844 aa21.28■■□□□ 1
PPM1B-207ENST00000409486 ARHGEF35A5YM69 484 aa21.28■■□□□ 1
PPM1B-207ENST00000409486 RPA1P27694 616 aa21.28■■□□□ 1
PPM1B-207ENST00000409486 RARRES1P49788 294 aa21.28■■□□□ 1
PPM1B-207ENST00000409486 GRIN1Q05586 938 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms