RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 RGS20O76081 388 aa22.7■■□□□ 1.23
USP39-203ENST00000409470 PLS3P13797 630 aa22.7■■□□□ 1.23
USP39-203ENST00000409470 KCNA2P16389 499 aa22.7■■□□□ 1.23
USP39-203ENST00000409470 NF2P35240 595 aa22.7■■□□□ 1.23
USP39-203ENST00000409470 KIF11P52732 1056 aa22.7■■□□□ 1.23
USP39-203ENST00000409470 APBA1Q02410 837 aa22.7■■□□□ 1.23
USP39-203ENST00000409470 TTLL12Q14166 644 aaPredicted RBP22.7■■□□□ 1.23
USP39-203ENST00000409470 LBX2Q6XYB7 198 aa22.7■■□□□ 1.23
USP39-203ENST00000409470 ZNF662Q6ZS27 426 aa22.7■■□□□ 1.23
USP39-203ENST00000409470 PDCL2Q8N4E4 241 aa22.7■■□□□ 1.23
USP39-203ENST00000409470 NAPGQ99747 312 aaPredicted RBP22.7■■□□□ 1.23
USP39-203ENST00000409470 TIPINQ9BVW5 301 aa22.7■■□□□ 1.23
USP39-203ENST00000409470 ANKEF1Q9NU02 776 aa22.7■■□□□ 1.23
USP39-203ENST00000409470 PPP1R37O75864 691 aa22.7■■□□□ 1.22
USP39-203ENST00000409470 MAPTP10636 758 aaKnown RBP22.7■■□□□ 1.22
USP39-203ENST00000409470 CYP2J2P51589 502 aa22.7■■□□□ 1.22
USP39-203ENST00000409470 PLA2G4FQ68DD2 849 aa22.7■■□□□ 1.22
USP39-203ENST00000409470 SMAP1Q8IYB5 467 aaPredicted RBP22.7■■□□□ 1.22
USP39-203ENST00000409470 DRC1Q96MC2 740 aa22.7■■□□□ 1.22
USP39-203ENST00000409470 STRA6Q9BX79 667 aa22.7■■□□□ 1.22
USP39-203ENST00000409470 FRMD4BQ9Y2L6 1034 aa22.7■■□□□ 1.22
USP39-203ENST00000409470 OTOFQ9HC10 1997 aa22.7■■□□□ 1.22
USP39-203ENST00000409470 PTPRFP10586 1907 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 IRF6O14896 467 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 ALCAMQ13740 583 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 HSP90AA2PQ14568 343 aaPredicted RBP22.69■■□□□ 1.22
USP39-203ENST00000409470 EXOC3L4Q17RC7 722 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 ERCC6LQ2NKX8 1250 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 SYN2Q92777 582 aaPredicted RBP22.69■■□□□ 1.22
USP39-203ENST00000409470 SLC35C1Q96A29 364 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 MKNK1Q9BUB5 465 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 JPH1Q9HDC5 661 aaPredicted RBP22.69■■□□□ 1.22
USP39-203ENST00000409470 GABBR1Q9UBS5 961 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 KIAA1217Q5T5P2 1943 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 RRP9O43818 475 aaKnown RBP22.69■■□□□ 1.22
USP39-203ENST00000409470 PEX10O60683 326 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 NPEPPSP55786 919 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 SP4Q02446 784 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 PPATQ06203 517 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 SLC9C1Q4G0N8 1177 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 TDRD12Q587J7 1177 aaKnown RBP22.69■■□□□ 1.22
USP39-203ENST00000409470 CDCA5Q96FF9 252 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 CLMNQ96JQ2 1002 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 IWS1Q96ST2 819 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 GANQ9H2C0 597 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 BTBD7Q9P203 1132 aa22.69■■□□□ 1.22
USP39-203ENST00000409470 SLC9A1P19634 815 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 VAV2P52735 878 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 IRX3P78415 501 aaPredicted RBP22.68■■□□□ 1.22
USP39-203ENST00000409470 KIF5AQ12840 1032 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 RAPGEF1Q13905 1077 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 FAM102BQ5T8I3 360 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 OTUD6AQ7L8S5 288 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 ERO1BQ86YB8 467 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 ANKRD13AQ8IZ07 590 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 EHBP1Q8NDI1 1231 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 UBXN4Q92575 508 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 ATP6V0A1Q93050 837 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 BORCS6Q96GS4 357 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 TMEM206Q9H813 350 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 SLC9A2Q9UBY0 812 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 FBXO40Q9UH90 709 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 NFASCO94856 1347 aa22.68■■□□□ 1.22
USP39-203ENST00000409470 RCCD1A6NED2 376 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 SPATA31C2B4DYI2 1134 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 ZNF263O14978 683 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 DKC1O60832 514 aaKnown RBP eCLIP22.67■■□□□ 1.22
USP39-203ENST00000409470 PSAPP07602 524 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 ACTN1P12814 892 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 STXBP2Q15833 593 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 GBP6Q6ZN66 633 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 USP50Q70EL3 339 aaPredicted RBP22.67■■□□□ 1.22
USP39-203ENST00000409470 MOB2Q70IA6 237 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 PROCA1Q8NCQ7 364 aaPredicted RBP22.67■■□□□ 1.22
USP39-203ENST00000409470 DNERQ8NFT8 737 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 ACCSQ96QU6 501 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 IFIH1Q9BYX4 1025 aaKnown RBP22.67■■□□□ 1.22
USP39-203ENST00000409470 TSGA10Q9BZW7 698 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 LACRTQ9GZZ8 138 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 PLCB1Q9NQ66 1216 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 GPRC5CQ9NQ84 441 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 DMAC2Q9NW81 257 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 CGNQ9P2M7 1197 aaKnown RBP22.67■■□□□ 1.22
USP39-203ENST00000409470 PCDHA13Q9Y5I0 950 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 PFASO15067 1338 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 PAPPA2Q9BXP8 1791 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 A0A0G2JLL6 359 aaPredicted RBP22.67■■□□□ 1.22
USP39-203ENST00000409470 SORBS3O60504 671 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 SERPING1P05155 500 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 PON1P27169 355 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 CNTN2Q02246 1040 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 ANO5Q75V66 913 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 PRRT2Q7Z6L0 340 aaPredicted RBP22.67■■□□□ 1.22
USP39-203ENST00000409470 RIOX2Q8IUF8 465 aa22.67■■□□□ 1.22
USP39-203ENST00000409470 SSU72P8A0A1W2PR75 194 aa22.66■■□□□ 1.22
USP39-203ENST00000409470 EFCAB8A8MWE9 144 aa22.66■■□□□ 1.22
USP39-203ENST00000409470 EXOC3O60645 756 aa22.66■■□□□ 1.22
USP39-203ENST00000409470 TADA3O75528 432 aa22.66■■□□□ 1.22
USP39-203ENST00000409470 EPHX2P34913 555 aa22.66■■□□□ 1.22
USP39-203ENST00000409470 PEX3P56589 373 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms