RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 TLR9Q9NR96 1032 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 NR2E1Q9Y466 385 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 PCDHA2Q9Y5H9 948 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 TRANK1O15050 2925 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 LOC730098B7Z3J9 87 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 BACH1O14867 736 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 GPR182O15218 404 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 RPS6KA5O75582 802 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 S1PR4O95977 384 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 ITGB1P05556 798 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 INSRRP14616 1297 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 LAG3P18627 525 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 ZNF76P36508 570 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 SLC19A1P41440 591 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 SARSP49591 514 aaKnown RBP8.84□□□□□ -0.99
LSM5-202ENST00000409292 STAT5BP51692 787 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 FOXK2Q01167 660 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 KRT17Q04695 432 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 TROAPQ12815 778 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 SEMA3FQ13275 785 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 CES5AQ6NT32 575 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 PLPPR4Q7Z2D5 763 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 SPPL3Q8TCT6 385 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 ATOH1Q92858 354 aaPredicted RBP8.84□□□□□ -0.99
LSM5-202ENST00000409292 MSLNLQ96KJ4 702 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 SLC6A16Q9GZN6 736 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 GLT8D2Q9H1C3 349 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 ATP6V0A4Q9HBG4 840 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 JADE2Q9NQC1 790 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 PKD2L1Q9P0L9 805 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 SLC9A2Q9UBY0 812 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 PADI3Q9ULW8 664 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 GINS2Q9Y248 185 aa8.84□□□□□ -0.99
LSM5-202ENST00000409292 USP15Q9Y4E8 981 aaPredicted RBP8.84□□□□□ -0.99
LSM5-202ENST00000409292 TTC3P53804 2025 aa8.83□□□□□ -1
LSM5-202ENST00000409292 IGSF9BQ9UPX0 1349 aa8.83□□□□□ -1
LSM5-202ENST00000409292 SMIM35A0A1B0GVV1 85 aa8.83□□□□□ -1
LSM5-202ENST00000409292 GSTTP1A0A1W2PQM5 241 aa8.83□□□□□ -1
LSM5-202ENST00000409292 CARNS1A5YM72 827 aa8.83□□□□□ -1
LSM5-202ENST00000409292 E7EWF7 191 aa8.83□□□□□ -1
LSM5-202ENST00000409292 LINC01565O15544 149 aa8.83□□□□□ -1
LSM5-202ENST00000409292 CYTH3O43739 400 aa8.83□□□□□ -1
LSM5-202ENST00000409292 FOSP01100 380 aaPredicted RBP8.83□□□□□ -1
LSM5-202ENST00000409292 KCNA2P16389 499 aa8.83□□□□□ -1
LSM5-202ENST00000409292 HOXB8P17481 243 aaPredicted RBP8.83□□□□□ -1
LSM5-202ENST00000409292 MCM5P33992 734 aa8.83□□□□□ -1
LSM5-202ENST00000409292 PPM1AP35813 382 aa8.83□□□□□ -1
LSM5-202ENST00000409292 GCGRP47871 477 aa8.83□□□□□ -1
LSM5-202ENST00000409292 CBX2Q14781 532 aaPredicted RBP8.83□□□□□ -1
LSM5-202ENST00000409292 TPRNQ4KMQ1 711 aa8.83□□□□□ -1
LSM5-202ENST00000409292 SLC24A5Q71RS6 500 aa8.83□□□□□ -1
LSM5-202ENST00000409292 ZNF654Q8IZM8 581 aa8.83□□□□□ -1
LSM5-202ENST00000409292 TMEM87BQ96K49 555 aa8.83□□□□□ -1
LSM5-202ENST00000409292 SNX27Q96L92 541 aa8.83□□□□□ -1
LSM5-202ENST00000409292 PHOX2BQ99453 314 aa8.83□□□□□ -1
LSM5-202ENST00000409292 BCAS3Q9H6U6 928 aa8.83□□□□□ -1
LSM5-202ENST00000409292 RC3H2Q9HBD1 1191 aaKnown RBP8.83□□□□□ -1
LSM5-202ENST00000409292 NGRNQ9NPE2 291 aaKnown RBP8.83□□□□□ -1
LSM5-202ENST00000409292 ENTPD7Q9NQZ7 604 aa8.83□□□□□ -1
LSM5-202ENST00000409292 TMEM260Q9NX78 707 aa8.83□□□□□ -1
LSM5-202ENST00000409292 BARX2Q9UMQ3 279 aaPredicted RBP8.83□□□□□ -1
LSM5-202ENST00000409292 PCDHA6Q9UN73 950 aa8.83□□□□□ -1
LSM5-202ENST00000409292 PCDHA8Q9Y5H6 950 aa8.83□□□□□ -1
LSM5-202ENST00000409292 KDM3AQ9Y4C1 1321 aa8.82□□□□□ -1
LSM5-202ENST00000409292 BAZ2BQ9UIF8 2168 aaKnown RBP8.82□□□□□ -1
LSM5-202ENST00000409292 TBKBP1A7MCY6 615 aa8.82□□□□□ -1
LSM5-202ENST00000409292 MEIS2O14770 477 aa8.82□□□□□ -1
LSM5-202ENST00000409292 HBP1O60381 514 aa8.82□□□□□ -1
LSM5-202ENST00000409292 FGF18O76093 207 aa8.82□□□□□ -1
LSM5-202ENST00000409292 CYP21A2P08686 494 aa8.82□□□□□ -1
LSM5-202ENST00000409292 ZSCAN20P17040 1043 aaPredicted RBP8.82□□□□□ -1
LSM5-202ENST00000409292 GTF2F1P35269 517 aaKnown RBP eCLIP8.82□□□□□ -1
LSM5-202ENST00000409292 TMEM62Q0P6H9 643 aa8.82□□□□□ -1
LSM5-202ENST00000409292 PTPN21Q16825 1174 aa8.82□□□□□ -1
LSM5-202ENST00000409292 MIS18BP1Q6P0N0 1132 aa8.82□□□□□ -1
LSM5-202ENST00000409292 HEATR3Q7Z4Q2 680 aa8.82□□□□□ -1
LSM5-202ENST00000409292 CKAP2LQ8IYA6 745 aa8.82□□□□□ -1
LSM5-202ENST00000409292 UBALD2Q8IYN6 164 aa8.82□□□□□ -1
LSM5-202ENST00000409292 NLRP7Q8WX94 980 aa8.82□□□□□ -1
LSM5-202ENST00000409292 CASP10Q92851 521 aa8.82□□□□□ -1
LSM5-202ENST00000409292 NECTIN4Q96NY8 510 aa8.82□□□□□ -1
LSM5-202ENST00000409292 SPSB2Q99619 263 aa8.82□□□□□ -1
LSM5-202ENST00000409292 OSBPL7Q9BZF2 842 aa8.82□□□□□ -1
LSM5-202ENST00000409292 AGO3Q9H9G7 860 aaKnown RBP8.82□□□□□ -1
LSM5-202ENST00000409292 CLEC1BQ9P126 229 aa8.82□□□□□ -1
LSM5-202ENST00000409292 CEP131Q9UPN4 1083 aa8.82□□□□□ -1
LSM5-202ENST00000409292 LZTS1Q9Y250 596 aa8.82□□□□□ -1
LSM5-202ENST00000409292 SUPT16HQ9Y5B9 1047 aaKnown RBP8.82□□□□□ -1
LSM5-202ENST00000409292 UBIAD1Q9Y5Z9 338 aa8.82□□□□□ -1
LSM5-202ENST00000409292 SLC12A7Q9Y666 1083 aa8.82□□□□□ -1
LSM5-202ENST00000409292 COL1A2P08123 1366 aa8.82□□□□□ -1
LSM5-202ENST00000409292 NFASCO94856 1347 aa8.81□□□□□ -1
LSM5-202ENST00000409292 ZNF318Q5VUA4 2279 aa8.81□□□□□ -1
LSM5-202ENST00000409292 ATP9AO75110 1047 aa8.81□□□□□ -1
LSM5-202ENST00000409292 ITGB5P18084 799 aa8.81□□□□□ -1
LSM5-202ENST00000409292 KLRC1P26715 233 aa8.81□□□□□ -1
LSM5-202ENST00000409292 TMOD1P28289 359 aa8.81□□□□□ -1
LSM5-202ENST00000409292 AVPR2P30518 371 aa8.81□□□□□ -1
LSM5-202ENST00000409292 CA8P35219 290 aa8.81□□□□□ -1
LSM5-202ENST00000409292 TECP42680 631 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms