RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 RTP3Q9BQQ7 232 aa14.72□□□□□ -0.05
CHRNA1-203ENST00000409219 IFIT3O14879 490 aaKnown RBP14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 GPR182O15218 404 aa14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 ACTR2P61160 394 aa14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 DSC3Q14574 896 aa14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 PUM1Q14671 1186 aaKnown RBP eCLIP14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 ODR4Q5SWX8 454 aa14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 PLPPR4Q7Z2D5 763 aa14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 KIAA0319LQ8IZA0 1049 aa14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 SLC39A11Q8N1S5 342 aa14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 KCNG4Q8TDN1 519 aa14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 CNTNAP3BQ96NU0 1288 aa14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 PPP1R16BQ96T49 567 aa14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 CNTNAP3Q9BZ76 1288 aa14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 JADE2Q9NQC1 790 aa14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 DIAPH3Q9NSV4 1193 aa14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 SPG21Q9NZD8 308 aa14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 DUSP12Q9UNI6 340 aa14.71□□□□□ -0.05
CHRNA1-203ENST00000409219 MAFGO15525 162 aa14.7□□□□□ -0.06
CHRNA1-203ENST00000409219 EPCAMP16422 314 aa14.7□□□□□ -0.06
CHRNA1-203ENST00000409219 KLRC1P26715 233 aa14.7□□□□□ -0.06
CHRNA1-203ENST00000409219 STAT5BP51692 787 aa14.7□□□□□ -0.06
CHRNA1-203ENST00000409219 UBE2SQ16763 222 aa14.7□□□□□ -0.06
CHRNA1-203ENST00000409219 ATAT1Q5SQI0 421 aa14.7□□□□□ -0.06
CHRNA1-203ENST00000409219 SIX5Q8N196 739 aa14.7□□□□□ -0.06
CHRNA1-203ENST00000409219 OSMRQ99650 979 aa14.7□□□□□ -0.06
CHRNA1-203ENST00000409219 SPZ1Q9BXG8 430 aa14.7□□□□□ -0.06
CHRNA1-203ENST00000409219 LNPKQ9C0E8 428 aa14.7□□□□□ -0.06
CHRNA1-203ENST00000409219 IL25Q9H293 177 aa14.7□□□□□ -0.06
CHRNA1-203ENST00000409219 SEMA4AQ9H3S1 761 aa14.7□□□□□ -0.06
CHRNA1-203ENST00000409219 CYP26B1Q9NR63 512 aa14.7□□□□□ -0.06
CHRNA1-203ENST00000409219 DZANK1Q9NVP4 752 aa14.7□□□□□ -0.06
CHRNA1-203ENST00000409219 R4GN57 208 aa14.7□□□□□ -0.06
CHRNA1-203ENST00000409219 ACACBO00763 2458 aa14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 HOXA2O43364 376 aa14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 CA8P35219 290 aa14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 KIZQ2M2Z5 673 aa14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 RRP36Q96EU6 259 aaKnown RBP14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 KCNH7Q9NS40 1196 aa14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 DLL3Q9NYJ7 618 aa14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 FBXL21Q9UKT6 434 aa14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 NFASCO94856 1347 aa14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 ERICH2A1L162 156 aa14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 TDGQ13569 410 aa14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 WTAPQ15007 396 aa14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 CLLU1OSQ5K130 101 aa14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 CYP2W1Q8TAV3 490 aa14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 AUTS2Q8WXX7 1259 aa14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 ZBP1Q9H171 429 aa14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 SEC63Q9UGP8 760 aaKnown RBP14.69□□□□□ -0.06
CHRNA1-203ENST00000409219 SPTBN2O15020 2390 aa14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 ZBTB42B2RXF5 422 aa14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 NARSO43776 548 aaKnown RBP14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 HBP1O60381 514 aa14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 ATG7O95352 703 aa14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 SLC26A2P50443 739 aa14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 CRYBB1P53674 252 aaPredicted RBP14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 TRDNQ13061 729 aa14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 TMC5Q6UXY8 1006 aa14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 CCDC149Q6ZUS6 474 aa14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 ABI1Q8IZP0 508 aa14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 ACSF2Q96CM8 615 aaPredicted RBP14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 PSTPIP2Q9H939 334 aa14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 KCNK12Q9HB15 430 aa14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 COL1A2P08123 1366 aa14.68□□□□□ -0.06
CHRNA1-203ENST00000409219 GPR179Q6PRD1 2367 aa14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 IGKV6D-21A0A0A0MT36 114 aa14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 SPDYE3A6NKU9 549 aa14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 NT5C1B-RDH14C9J2C7 533 aa14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 GPR32O75388 356 aa14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 CXCL14O95715 111 aa14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 VTNP04004 478 aa14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 METAP2P50579 478 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 ITGB3BPQ13352 177 aaPredicted RBP14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 CATIPQ7Z7H3 387 aa14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 TMEM173Q86WV6 379 aaPredicted RBP14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 ECHDC2Q86YB7 292 aa14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 CCDC60Q8IWA6 550 aaPredicted RBP14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 RIN2Q8WYP3 895 aaPredicted RBP14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 HINFPQ9BQA5 517 aa14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 MXRA8Q9BRK3 442 aa14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 SDF4Q9BRK5 362 aa14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 MYL10Q9BUA6 226 aa14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 PCDHA6Q9UN73 950 aa14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 PCDHA8Q9Y5H6 950 aa14.67□□□□□ -0.06
CHRNA1-203ENST00000409219 KRBA1A5PL33 1030 aa14.66□□□□□ -0.06
CHRNA1-203ENST00000409219 HIP1O00291 1037 aa14.66□□□□□ -0.06
CHRNA1-203ENST00000409219 PLEKHA8P1O95397 391 aa14.66□□□□□ -0.06
CHRNA1-203ENST00000409219 C22orf31O95567 290 aa14.66□□□□□ -0.06
CHRNA1-203ENST00000409219 NEFLP07196 543 aa14.66□□□□□ -0.06
CHRNA1-203ENST00000409219 OTOP3Q7RTS5 596 aa14.66□□□□□ -0.06
CHRNA1-203ENST00000409219 VPS52Q8N1B4 723 aa14.66□□□□□ -0.06
CHRNA1-203ENST00000409219 DCLK2Q8N568 766 aa14.66□□□□□ -0.06
CHRNA1-203ENST00000409219 SLC22A17Q8WUG5 538 aa14.66□□□□□ -0.06
CHRNA1-203ENST00000409219 TMEM169Q96HH4 297 aa14.66□□□□□ -0.06
CHRNA1-203ENST00000409219 SFXN1Q9H9B4 322 aa14.66□□□□□ -0.06
CHRNA1-203ENST00000409219 IRAK3Q9Y616 596 aa14.66□□□□□ -0.06
CHRNA1-203ENST00000409219 TAF6LQ9Y6J9 622 aa14.66□□□□□ -0.06
CHRNA1-203ENST00000409219 CCNE2O96020 404 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms