RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 CPP00450 1065 aa18.93■□□□□ 0.62
SMPD4-202ENST00000409031 PDHBP11177 359 aa18.93■□□□□ 0.62
SMPD4-202ENST00000409031 PREPLQ4J6C6 727 aaPredicted RBP18.93■□□□□ 0.62
SMPD4-202ENST00000409031 RBM26Q5T8P6 1007 aaKnown RBP18.93■□□□□ 0.62
SMPD4-202ENST00000409031 SNF8Q96H20 258 aa18.93■□□□□ 0.62
SMPD4-202ENST00000409031 ARHGEF10LQ9HCE6 1279 aa18.93■□□□□ 0.62
SMPD4-202ENST00000409031 HPSEQ9Y251 543 aa18.93■□□□□ 0.62
SMPD4-202ENST00000409031 PDS5AQ29RF7 1337 aaKnown RBP18.93■□□□□ 0.62
SMPD4-202ENST00000409031 MCF2LO15068 1137 aa18.93■□□□□ 0.62
SMPD4-202ENST00000409031 KRT3P12035 628 aa18.93■□□□□ 0.62
SMPD4-202ENST00000409031 FGFR4P22455 802 aa18.93■□□□□ 0.62
SMPD4-202ENST00000409031 ORC2Q13416 577 aaPredicted RBP18.93■□□□□ 0.62
SMPD4-202ENST00000409031 YTHDF3Q7Z739 585 aaKnown RBP18.93■□□□□ 0.62
SMPD4-202ENST00000409031 NAF1Q96HR8 494 aaKnown RBP18.93■□□□□ 0.62
SMPD4-202ENST00000409031 SCYL1Q96KG9 808 aa18.93■□□□□ 0.62
SMPD4-202ENST00000409031 CCSER1Q9C0I3 900 aa18.93■□□□□ 0.62
SMPD4-202ENST00000409031 WNT8AQ9H1J5 351 aa18.93■□□□□ 0.62
SMPD4-202ENST00000409031 CHCHD3Q9NX63 227 aaKnown RBP18.93■□□□□ 0.62
SMPD4-202ENST00000409031 CFAP65Q6ZU64 1925 aaKnown RBP18.93■□□□□ 0.62
SMPD4-202ENST00000409031 H0YCG3 227 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 RHOBTB3O94955 611 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 ATP6V1G2O95670 118 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 LAMB3Q13751 1172 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 FSCBQ5H9T9 825 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 DTX3LQ8TDB6 740 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 UPF3AQ9H1J1 476 aaKnown RBP18.92■□□□□ 0.62
SMPD4-202ENST00000409031 SMYD3Q9H7B4 428 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 GINM1Q9NU53 330 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 MAGEA13PA6NCF6 341 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 MCAMP43121 646 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 SKOR1P84550 965 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 KPNB1Q14974 876 aaKnown RBP18.92■□□□□ 0.62
SMPD4-202ENST00000409031 TRIM59Q8IWR1 403 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 TMEM206Q9H813 350 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 PCDHA1Q9Y5I3 950 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 USP6P35125 1406 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 EPHB1P54762 984 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 GPATCH4Q5T3I0 446 aaKnown RBP18.92■□□□□ 0.62
SMPD4-202ENST00000409031 DNAJC7Q99615 494 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 MRPL46Q9H2W6 279 aaKnown RBP18.92■□□□□ 0.62
SMPD4-202ENST00000409031 GNAT1P11488 350 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 PSMD7P51665 324 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 DAB2IPQ5VWQ8 1189 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 SESTD1Q86VW0 696 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 LRRC34Q8IZ02 419 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 SLC17A8Q8NDX2 589 aa18.92■□□□□ 0.62
SMPD4-202ENST00000409031 AK9Q5TCS8 1911 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 CFLARO15519 480 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 TXNRD1Q16881 649 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 RABGAP1LQ5R372 815 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 CDAN1Q8IWY9 1227 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 ZKSCAN4Q969J2 545 aaPredicted RBP18.91■□□□□ 0.62
SMPD4-202ENST00000409031 MID2Q9UJV3 735 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 MAP3K4Q9Y6R4 1608 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 EEF1B2P24534 225 aaKnown RBP18.91■□□□□ 0.62
SMPD4-202ENST00000409031 NAB2Q15742 525 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 SPDYE1Q8NFV5 336 aaPredicted RBP18.91■□□□□ 0.62
SMPD4-202ENST00000409031 MCF2P10911 925 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 OCA2Q04671 838 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 CHRNDQ07001 517 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 RFX6Q8HWS3 928 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 TBC1D22AQ8WUA7 517 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 ERGIC2Q96RQ1 377 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 PLAGL2Q9UPG8 496 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 TMEM120BA0PK00 339 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 PPP1R3GB7ZBB8 358 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 TJP3O95049 919 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 RPS8P62241 208 aaKnown RBP18.91■□□□□ 0.62
SMPD4-202ENST00000409031 USP49Q70CQ1 688 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 COL23A1Q86Y22 540 aaPredicted RBP18.91■□□□□ 0.62
SMPD4-202ENST00000409031 KIRREL3Q8IZU9 778 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 SLC26A7Q8TE54 656 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 ANKS1AQ92625 1134 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 TAF6LQ9Y6J9 622 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 ZNF609O15014 1411 aa18.91■□□□□ 0.62
SMPD4-202ENST00000409031 SERPINB3P29508 390 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 RSBN1LQ6PCB5 846 aaPredicted RBP18.9■□□□□ 0.62
SMPD4-202ENST00000409031 TMC4Q7Z404 712 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 PCGF5Q86SE9 256 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 TRIM51Q9BSJ1 452 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 TRIM9Q9C026 710 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 PARVGQ9HBI0 331 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 E7ENQ6 273 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 CATSPER1Q8NEC5 780 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 ACCSQ96QU6 501 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 NDUFA13Q9P0J0 144 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 STAT2P52630 851 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 RARS2Q5T160 578 aaKnown RBP18.9■□□□□ 0.62
SMPD4-202ENST00000409031 DDX42Q86XP3 938 aaKnown RBP eCLIP18.9■□□□□ 0.62
SMPD4-202ENST00000409031 MDM1Q8TC05 714 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 CASKIN2Q8WXE0 1202 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 ERP44Q9BS26 406 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 MAP3K15Q6ZN16 1313 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 KIF1BO60333 1816 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 ORC4O43929 436 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 KRT38O76015 456 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 STX1BP61266 288 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 FUKQ8N0W3 1084 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 RAD54LQ92698 747 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 WWP1Q9H0M0 922 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms