RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 RINT1Q6NUQ1 792 aa17.11■□□□□ 0.33
TOM1-203ENST00000404284 KLHL7Q8IXQ5 586 aa17.11■□□□□ 0.33
TOM1-203ENST00000404284 TPCN2Q8NHX9 752 aa17.11■□□□□ 0.33
TOM1-203ENST00000404284 OLIG1Q8TAK6 271 aa17.11■□□□□ 0.33
TOM1-203ENST00000404284 SCFD2Q8WU76 684 aa17.11■□□□□ 0.33
TOM1-203ENST00000404284 IKZF4Q9H2S9 585 aa17.11■□□□□ 0.33
TOM1-203ENST00000404284 GTPBP10A4D1E9 387 aaKnown RBP17.11■□□□□ 0.33
TOM1-203ENST00000404284 BMP3P12645 472 aa17.11■□□□□ 0.33
TOM1-203ENST00000404284 HDLBPQ00341 1268 aaKnown RBP17.11■□□□□ 0.33
TOM1-203ENST00000404284 SF3B2Q13435 895 aaKnown RBP17.11■□□□□ 0.33
TOM1-203ENST00000404284 IFI16Q16666 785 aaKnown RBP17.11■□□□□ 0.33
TOM1-203ENST00000404284 CFAP58Q5T655 872 aa17.11■□□□□ 0.33
TOM1-203ENST00000404284 STRIP1Q5VSL9 837 aa17.11■□□□□ 0.33
TOM1-203ENST00000404284 FBXW10Q5XX13 1052 aa17.11■□□□□ 0.33
TOM1-203ENST00000404284 SH2D3CQ8N5H7 860 aa17.11■□□□□ 0.33
TOM1-203ENST00000404284 ACTRT1Q8TDG2 376 aa17.11■□□□□ 0.33
TOM1-203ENST00000404284 WHAMMQ8TF30 809 aa17.11■□□□□ 0.33
TOM1-203ENST00000404284 PBKQ96KB5 322 aa17.11■□□□□ 0.33
TOM1-203ENST00000404284 SLX4Q8IY92 1834 aa17.11■□□□□ 0.33
TOM1-203ENST00000404284 SFI1A8K8P3 1242 aa17.1■□□□□ 0.33
TOM1-203ENST00000404284 PIK3CDO00329 1044 aa17.1■□□□□ 0.33
TOM1-203ENST00000404284 DDX3XO00571 662 aaKnown RBP eCLIP17.1■□□□□ 0.33
TOM1-203ENST00000404284 FKBP1AP62942 108 aaKnown RBP17.1■□□□□ 0.33
TOM1-203ENST00000404284 SLC30A10Q6XR72 485 aa17.1■□□□□ 0.33
TOM1-203ENST00000404284 CD302Q8IX05 232 aa17.1■□□□□ 0.33
TOM1-203ENST00000404284 HSD17B14Q9BPX1 270 aa17.1■□□□□ 0.33
TOM1-203ENST00000404284 PCDHB13Q9Y5F0 798 aa17.1■□□□□ 0.33
TOM1-203ENST00000404284 EIF3DO15371 548 aaKnown RBP eCLIP17.1■□□□□ 0.333e-7■■■□□ 15.2
TOM1-203ENST00000404284 GAP43P17677 238 aa17.1■□□□□ 0.33
TOM1-203ENST00000404284 ECHS1P30084 290 aa17.1■□□□□ 0.33
TOM1-203ENST00000404284 ERVK-9P63128 1117 aa17.1■□□□□ 0.33
TOM1-203ENST00000404284 RRP1BQ14684 758 aaKnown RBP17.1■□□□□ 0.33
TOM1-203ENST00000404284 SLC15A2Q16348 729 aa17.1■□□□□ 0.33
TOM1-203ENST00000404284 PTPROQ16827 1216 aa17.1■□□□□ 0.33
TOM1-203ENST00000404284 SLFN11Q7Z7L1 901 aa17.1■□□□□ 0.33
TOM1-203ENST00000404284 METTL13Q8N6R0 699 aa17.1■□□□□ 0.33
TOM1-203ENST00000404284 PIGOQ8TEQ8 1089 aa17.1■□□□□ 0.33
TOM1-203ENST00000404284 WDR18Q9BV38 432 aa17.1■□□□□ 0.33
TOM1-203ENST00000404284 A0A1W2PRG0 241 aa17.09■□□□□ 0.33
TOM1-203ENST00000404284 BHMG1C9JSJ3 638 aaPredicted RBP17.09■□□□□ 0.33
TOM1-203ENST00000404284 GH2P01242 217 aa17.09■□□□□ 0.33
TOM1-203ENST00000404284 CTTNQ14247 550 aaKnown RBP17.09■□□□□ 0.33
TOM1-203ENST00000404284 ATRNL1Q5VV63 1379 aa17.09■□□□□ 0.33
TOM1-203ENST00000404284 MASTLQ96GX5 879 aa17.09■□□□□ 0.33
TOM1-203ENST00000404284 A0A0A6YYK5 440 aaPredicted RBP17.09■□□□□ 0.33
TOM1-203ENST00000404284 CEP104O60308 925 aa17.09■□□□□ 0.33
TOM1-203ENST00000404284 TRIM37O94972 964 aa17.09■□□□□ 0.33
TOM1-203ENST00000404284 NMT1P30419 496 aaKnown RBP17.09■□□□□ 0.33
TOM1-203ENST00000404284 ZNF76P36508 570 aa17.09■□□□□ 0.33
TOM1-203ENST00000404284 HSPA9P38646 679 aaKnown RBP17.09■□□□□ 0.33
TOM1-203ENST00000404284 CCT5P48643 541 aa17.09■□□□□ 0.33
TOM1-203ENST00000404284 MEX3CQ5U5Q3 659 aaKnown RBP17.09■□□□□ 0.33
TOM1-203ENST00000404284 KCTD16Q68DU8 428 aa17.09■□□□□ 0.33
TOM1-203ENST00000404284 TTC19Q6DKK2 380 aaPredicted RBP17.09■□□□□ 0.33
TOM1-203ENST00000404284 C1orf186Q6ZWK4 172 aa17.09■□□□□ 0.33
TOM1-203ENST00000404284 KCTD17Q8N5Z5 321 aa17.09■□□□□ 0.33
TOM1-203ENST00000404284 CALR3Q96L12 384 aaKnown RBP17.09■□□□□ 0.33
TOM1-203ENST00000404284 ISCUQ9H1K1 167 aa17.09■□□□□ 0.33
TOM1-203ENST00000404284 TAF1DQ9H5J8 278 aaPredicted RBP17.09■□□□□ 0.33
TOM1-203ENST00000404284 PRR12Q9ULL5 1215 aa17.09■□□□□ 0.33
TOM1-203ENST00000404284 STXBP5LQ9Y2K9 1186 aa17.09■□□□□ 0.33
TOM1-203ENST00000404284 H2AFZP0C0S5 128 aa17.08■□□□□ 0.33
TOM1-203ENST00000404284 NFIL3Q16649 462 aa17.08■□□□□ 0.33
TOM1-203ENST00000404284 H2AFVQ71UI9 128 aa17.08■□□□□ 0.33
TOM1-203ENST00000404284 OTOP1Q7RTM1 612 aa17.08■□□□□ 0.33
TOM1-203ENST00000404284 RPAINQ86UA6 219 aa17.08■□□□□ 0.33
TOM1-203ENST00000404284 EIF1ADQ8N9N8 165 aaKnown RBP17.08■□□□□ 0.33
TOM1-203ENST00000404284 BCAS4Q8TDM0 211 aa17.08■□□□□ 0.33
TOM1-203ENST00000404284 FIZ1Q96SL8 496 aa17.08■□□□□ 0.33
TOM1-203ENST00000404284 INTUQ9ULD6 942 aa17.08■□□□□ 0.33
TOM1-203ENST00000404284 NOC2LQ9Y3T9 749 aaKnown RBP17.08■□□□□ 0.33
TOM1-203ENST00000404284 PGRMC1O00264 195 aaKnown RBP17.08■□□□□ 0.32
TOM1-203ENST00000404284 ECE2O60344 883 aa17.08■□□□□ 0.32
TOM1-203ENST00000404284 SLITRK3O94933 977 aa17.08■□□□□ 0.32
TOM1-203ENST00000404284 SCP2P22307 547 aa17.08■□□□□ 0.32
TOM1-203ENST00000404284 PDE6BP35913 854 aa17.08■□□□□ 0.32
TOM1-203ENST00000404284 PPP2R5AQ15172 486 aa17.08■□□□□ 0.32
TOM1-203ENST00000404284 ZC2HC1CQ53FD0 456 aaPredicted RBP17.08■□□□□ 0.32
TOM1-203ENST00000404284 KCNV1Q6PIU1 500 aa17.08■□□□□ 0.32
TOM1-203ENST00000404284 VPS36Q86VN1 386 aa17.08■□□□□ 0.32
TOM1-203ENST00000404284 FAM186BQ8IYM0 893 aa17.08■□□□□ 0.32
TOM1-203ENST00000404284 NLGN1Q8N2Q7 840 aa17.08■□□□□ 0.32
TOM1-203ENST00000404284 LNX1Q8TBB1 728 aaPredicted RBP17.08■□□□□ 0.32
TOM1-203ENST00000404284 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.08■□□□□ 0.326e-8■■■■□ 24
TOM1-203ENST00000404284 TUFT1Q9NNX1 390 aa17.08■□□□□ 0.32
TOM1-203ENST00000404284 ZBTB39O15060 712 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 PSMD10O75832 226 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 GFPT2O94808 682 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 FAM13AO94988 1023 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 FERP16591 822 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 PDCLQ13371 301 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 SPICE1Q8N0Z3 855 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 SLC30A5Q8TAD4 765 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 DYDC2Q96IM9 177 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.07■□□□□ 0.321e-7■□□□□ 10
TOM1-203ENST00000404284 TMX4Q9H1E5 349 aaPredicted RBP17.07■□□□□ 0.32
TOM1-203ENST00000404284 RABEP2Q9H5N1 569 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 SERPINA10Q9UK55 444 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 EVI5O60447 810 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 PSMC2P35998 433 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms