RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 CEP170P1Q96L14 293 aa21.48■■□□□ 1.03
RTN4-207ENST00000402434 MAP7D2Q96T17 732 aa21.48■■□□□ 1.03
RTN4-207ENST00000402434 DHX33Q9H6R0 707 aaKnown RBP21.48■■□□□ 1.03
RTN4-207ENST00000402434 ANKEF1Q9NU02 776 aa21.48■■□□□ 1.03
RTN4-207ENST00000402434 XRCC6P12956 609 aaKnown RBP eCLIP21.47■■□□□ 1.03
RTN4-207ENST00000402434 DNAJB2P25686 324 aa21.47■■□□□ 1.03
RTN4-207ENST00000402434 RPA1P27694 616 aa21.47■■□□□ 1.03
RTN4-207ENST00000402434 CRYBB1P53674 252 aaPredicted RBP21.47■■□□□ 1.03
RTN4-207ENST00000402434 IL17AQ16552 155 aa21.47■■□□□ 1.03
RTN4-207ENST00000402434 FAM43BQ6ZT52 329 aaPredicted RBP21.47■■□□□ 1.03
RTN4-207ENST00000402434 FERMT3Q86UX7 667 aa21.47■■□□□ 1.03
RTN4-207ENST00000402434 HERC6Q8IVU3 1022 aa21.47■■□□□ 1.03
RTN4-207ENST00000402434 EXOC8Q8IYI6 725 aa21.47■■□□□ 1.03
RTN4-207ENST00000402434 JPH2Q9BR39 696 aaPredicted RBP21.47■■□□□ 1.03
RTN4-207ENST00000402434 ADAMTS10Q9H324 1103 aa21.47■■□□□ 1.03
RTN4-207ENST00000402434 MTMR6Q9Y217 621 aa21.47■■□□□ 1.03
RTN4-207ENST00000402434 PBX2P40425 430 aa21.46■■□□□ 1.03
RTN4-207ENST00000402434 DNM2P50570 870 aa21.46■■□□□ 1.03
RTN4-207ENST00000402434 DEFB103AP81534 67 aa21.46■■□□□ 1.03
RTN4-207ENST00000402434 DRP2Q13474 957 aa21.46■■□□□ 1.03
RTN4-207ENST00000402434 KIZQ2M2Z5 673 aa21.46■■□□□ 1.03
RTN4-207ENST00000402434 ERMNQ8TAM6 284 aa21.46■■□□□ 1.03
RTN4-207ENST00000402434 TMEM40Q8WWA1 233 aa21.46■■□□□ 1.03
RTN4-207ENST00000402434 LRWD1Q9UFC0 647 aa21.46■■□□□ 1.03
RTN4-207ENST00000402434 AKT3Q9Y243 479 aa21.46■■□□□ 1.03
RTN4-207ENST00000402434 PCDHA11Q9Y5I1 949 aa21.46■■□□□ 1.03
RTN4-207ENST00000402434 MICAL3Q7RTP6 2002 aa21.46■■□□□ 1.03
RTN4-207ENST00000402434 LOXHD1Q8IVV2 1947 aa21.46■■□□□ 1.03
RTN4-207ENST00000402434 TMEM265A0A087WTH1 108 aa21.45■■□□□ 1.03
RTN4-207ENST00000402434 STX6O43752 255 aa21.45■■□□□ 1.03
RTN4-207ENST00000402434 MED24O75448 989 aa21.45■■□□□ 1.03
RTN4-207ENST00000402434 MUTP22033 750 aa21.45■■□□□ 1.03
RTN4-207ENST00000402434 CD52P31358 61 aa21.45■■□□□ 1.03
RTN4-207ENST00000402434 RFC5P40937 340 aa21.45■■□□□ 1.03
RTN4-207ENST00000402434 NLRP11P59045 1033 aaKnown RBP21.45■■□□□ 1.03
RTN4-207ENST00000402434 CDC42EP1Q00587 391 aa21.45■■□□□ 1.03
RTN4-207ENST00000402434 RESTQ13127 1097 aa21.45■■□□□ 1.03
RTN4-207ENST00000402434 RAB30Q15771 203 aa21.45■■□□□ 1.03
RTN4-207ENST00000402434 XKR9Q5GH70 373 aa21.45■■□□□ 1.03
RTN4-207ENST00000402434 ARL6IP4Q66PJ3 421 aaKnown RBP21.45■■□□□ 1.03
RTN4-207ENST00000402434 DTHD1Q6ZMT9 781 aa21.45■■□□□ 1.03
RTN4-207ENST00000402434 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.45■■□□□ 1.035e-9■■■□□ 16.5
RTN4-207ENST00000402434 SLC7A3Q8WY07 619 aa21.45■■□□□ 1.03
RTN4-207ENST00000402434 RAB34Q9BZG1 259 aa21.45■■□□□ 1.03
RTN4-207ENST00000402434 PADI3Q9ULW8 664 aa21.45■■□□□ 1.03
RTN4-207ENST00000402434 GINS2Q9Y248 185 aa21.45■■□□□ 1.03
RTN4-207ENST00000402434 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.45■■□□□ 1.02
RTN4-207ENST00000402434 RABGGTBP53611 331 aa21.45■■□□□ 1.02
RTN4-207ENST00000402434 HAUS3Q68CZ6 603 aa21.45■■□□□ 1.02
RTN4-207ENST00000402434 MSRAQ9UJ68 235 aa21.45■■□□□ 1.02
RTN4-207ENST00000402434 STK24Q9Y6E0 443 aa21.45■■□□□ 1.02
RTN4-207ENST00000402434 HSP90AA1P07900 732 aaKnown RBP21.44■■□□□ 1.02
RTN4-207ENST00000402434 PDIA4P13667 645 aaKnown RBP21.44■■□□□ 1.02
RTN4-207ENST00000402434 RARRES1P49788 294 aa21.44■■□□□ 1.02
RTN4-207ENST00000402434 GPC3P51654 580 aa21.44■■□□□ 1.02
RTN4-207ENST00000402434 POLGP54098 1239 aaPredicted RBP21.44■■□□□ 1.02
RTN4-207ENST00000402434 Q7L0L9 218 aa21.44■■□□□ 1.02
RTN4-207ENST00000402434 DEFB123Q8N688 67 aa21.44■■□□□ 1.02
RTN4-207ENST00000402434 PIGOQ8TEQ8 1089 aa21.44■■□□□ 1.02
RTN4-207ENST00000402434 TIFAQ96CG3 184 aa21.44■■□□□ 1.02
RTN4-207ENST00000402434 OSMRQ99650 979 aa21.44■■□□□ 1.02
RTN4-207ENST00000402434 FTHL17Q9BXU8 183 aa21.44■■□□□ 1.02
RTN4-207ENST00000402434 YBX2Q9Y2T7 364 aaKnown RBP21.44■■□□□ 1.02
RTN4-207ENST00000402434 NOC2LQ9Y3T9 749 aaKnown RBP21.44■■□□□ 1.02
RTN4-207ENST00000402434 PTPRSQ13332 1948 aa21.43■■□□□ 1.02
RTN4-207ENST00000402434 ENPP3O14638 875 aa21.43■■□□□ 1.02
RTN4-207ENST00000402434 GAS2O43903 313 aaKnown RBP21.43■■□□□ 1.02
RTN4-207ENST00000402434 RPS6KA5O75582 802 aa21.43■■□□□ 1.02
RTN4-207ENST00000402434 GJB5O95377 273 aa21.43■■□□□ 1.02
RTN4-207ENST00000402434 BMP15O95972 392 aa21.43■■□□□ 1.02
RTN4-207ENST00000402434 AMHP03971 560 aa21.43■■□□□ 1.02
RTN4-207ENST00000402434 EIF4BP23588 611 aaKnown RBP21.43■■□□□ 1.02
RTN4-207ENST00000402434 PAK2Q13177 524 aa21.43■■□□□ 1.02
RTN4-207ENST00000402434 ZNF697Q5TEC3 545 aa21.43■■□□□ 1.02
RTN4-207ENST00000402434 TOP1MTQ969P6 601 aa21.43■■□□□ 1.02
RTN4-207ENST00000402434 NACC1Q96RE7 527 aa21.43■■□□□ 1.02
RTN4-207ENST00000402434 PPP1R16BQ96T49 567 aa21.43■■□□□ 1.02
RTN4-207ENST00000402434 TTYH1Q9H313 450 aaPredicted RBP21.43■■□□□ 1.02
RTN4-207ENST00000402434 ZSCAN16Q9H4T2 348 aaPredicted RBP21.43■■□□□ 1.02
RTN4-207ENST00000402434 ERVK-5Q9HDB9 667 aa21.43■■□□□ 1.02
RTN4-207ENST00000402434 SUCLA2Q9P2R7 463 aaPredicted RBP21.43■■□□□ 1.02
RTN4-207ENST00000402434 DBR1Q9UK59 544 aaKnown RBP21.43■■□□□ 1.02
RTN4-207ENST00000402434 ODR4Q5SWX8 454 aa21.42■■□□□ 1.02
RTN4-207ENST00000402434 POTEGQ6S5H5 508 aa21.42■■□□□ 1.02
RTN4-207ENST00000402434 TMCO2Q7Z6W1 182 aaPredicted RBP21.42■■□□□ 1.02
RTN4-207ENST00000402434 TMX1Q9H3N1 280 aa21.42■■□□□ 1.02
RTN4-207ENST00000402434 SEMA6BQ9H3T3 888 aa21.42■■□□□ 1.02
RTN4-207ENST00000402434 XPNPEP1Q9NQW7 623 aa21.42■■□□□ 1.02
RTN4-207ENST00000402434 GBF1Q92538 1859 aa21.42■■□□□ 1.02
RTN4-207ENST00000402434 A0A087WWV3 80 aa21.41■■□□□ 1.02
RTN4-207ENST00000402434 GPR182O15218 404 aa21.41■■□□□ 1.02
RTN4-207ENST00000402434 DGAT1O75907 488 aa21.41■■□□□ 1.02
RTN4-207ENST00000402434 MYOGP15173 224 aa21.41■■□□□ 1.02
RTN4-207ENST00000402434 CCT6AP40227 531 aaKnown RBP21.41■■□□□ 1.02
RTN4-207ENST00000402434 EMC2Q15006 297 aa21.41■■□□□ 1.02
RTN4-207ENST00000402434 SF3A1Q15459 793 aaKnown RBP21.41■■□□□ 1.02
RTN4-207ENST00000402434 ECM1Q16610 540 aa21.41■■□□□ 1.02
RTN4-207ENST00000402434 RTN4RL1Q86UN2 441 aaPredicted RBP21.41■■□□□ 1.02
RTN4-207ENST00000402434 ZNF410Q86VK4 478 aa21.41■■□□□ 1.02
RTN4-207ENST00000402434 RAD9AQ99638 391 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms