RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 PPP2R5AQ15172 486 aa11.77□□□□□ -0.53
LINC00649-202ENST00000400353 BEND6Q5SZJ8 279 aaPredicted RBP11.77□□□□□ -0.53
LINC00649-202ENST00000400353 DCAF15Q66K64 600 aa11.77□□□□□ -0.53
LINC00649-202ENST00000400353 ZNF720Q7Z2F6 126 aa11.77□□□□□ -0.53
LINC00649-202ENST00000400353 FAM186BQ8IYM0 893 aa11.77□□□□□ -0.53
LINC00649-202ENST00000400353 TEPSINQ96N21 525 aa11.77□□□□□ -0.53
LINC00649-202ENST00000400353 SPAG5Q96R06 1193 aa11.77□□□□□ -0.53
LINC00649-202ENST00000400353 PNKPQ96T60 521 aa11.77□□□□□ -0.53
LINC00649-202ENST00000400353 MMS19Q96T76 1030 aa11.77□□□□□ -0.53
LINC00649-202ENST00000400353 LXNQ9BS40 222 aa11.77□□□□□ -0.53
LINC00649-202ENST00000400353 CRACR2AQ9BSW2 395 aa11.77□□□□□ -0.53
LINC00649-202ENST00000400353 TSPYL1Q9H0U9 437 aa11.77□□□□□ -0.53
LINC00649-202ENST00000400353 MLXIPQ9HAP2 919 aa11.77□□□□□ -0.53
LINC00649-202ENST00000400353 SLC38A10Q9HBR0 1119 aa11.77□□□□□ -0.53
LINC00649-202ENST00000400353 DUSP10Q9Y6W6 482 aa11.77□□□□□ -0.53
LINC00649-202ENST00000400353 ZMYM2Q9UBW7 1377 aa11.77□□□□□ -0.53
LINC00649-202ENST00000400353 FER1L6Q2WGJ9 1857 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 GFPT2O94808 682 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 UCHL3P15374 230 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 ERCC3P19447 782 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 PON1P27169 355 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 NAB2Q15742 525 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 IFI16Q16666 785 aaKnown RBP11.76□□□□□ -0.53
LINC00649-202ENST00000400353 DCAF17Q5H9S7 520 aaPredicted RBP11.76□□□□□ -0.53
LINC00649-202ENST00000400353 DPY19L2P1Q6NXN4 242 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 XRRA1Q6P2D8 792 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 VPS36Q86VN1 386 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 SLC9A9Q8IVB4 645 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 MMGT1Q8N4V1 131 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 NOA1Q8NC60 698 aaKnown RBP11.76□□□□□ -0.53
LINC00649-202ENST00000400353 SLC17A8Q8NDX2 589 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 SLC35C1Q96A29 364 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 AS3MTQ9HBK9 375 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 AGO4Q9HCK5 861 aaKnown RBP11.76□□□□□ -0.53
LINC00649-202ENST00000400353 DMAC2Q9NW81 257 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.76□□□□□ -0.53
LINC00649-202ENST00000400353 PPP1R9AQ9ULJ8 1098 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 FRMD4BQ9Y2L6 1034 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 CAPN6Q9Y6Q1 641 aa11.76□□□□□ -0.53
LINC00649-202ENST00000400353 ITGB5P18084 799 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 NMT1P30419 496 aaKnown RBP11.75□□□□□ -0.53
LINC00649-202ENST00000400353 PAFAH1B1P43034 410 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 SNRPFP62306 86 aaKnown RBP11.75□□□□□ -0.53
LINC00649-202ENST00000400353 RASSF7Q02833 373 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 TKFCQ3LXA3 575 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 TCERG1LQ5VWI1 586 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 SYTL5Q8TDW5 730 aaPredicted RBP11.75□□□□□ -0.53
LINC00649-202ENST00000400353 TMEM174Q8WUU8 243 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 VTI1AQ96AJ9 217 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 BORCS6Q96GS4 357 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 MAF1Q9H063 256 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 TMEM206Q9H813 350 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 KCNH7Q9NS40 1196 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 TCEAL9Q9UHQ7 104 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 LTBP3Q9NS15 1303 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 CLIC2O15247 247 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 SASH3O75995 380 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 ALAS1P13196 640 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 FERP16591 822 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 SLC9A1P19634 815 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 VSNL1P62760 191 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 SMC1AQ14683 1233 aaKnown RBP11.75□□□□□ -0.53
LINC00649-202ENST00000400353 TERF2Q15554 542 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 ODR4Q5SWX8 454 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 CCDC181Q5TID7 509 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 FAM133AQ8N9E0 248 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 RDM1Q8NG50 284 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 CAPZA3Q96KX2 299 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 FIZ1Q96SL8 496 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 OSBPL9Q96SU4 736 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC00649-202ENST00000400353 STRA6Q9BX79 667 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 ABCB6Q9NP58 842 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 LARSQ9P2J5 1176 aaKnown RBP11.75□□□□□ -0.53
LINC00649-202ENST00000400353 L1RE1Q9UN81 338 aa11.75□□□□□ -0.53
LINC00649-202ENST00000400353 SFI1A8K8P3 1242 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 NFIBO00712 420 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 SRGAP2O75044 1071 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 HIP1RO75146 1068 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 CCDC172P0C7W6 258 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 RFX1P22670 979 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 SFNP31947 248 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 JAK3P52333 1124 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 NAP1L1P55209 391 aaKnown RBP11.74□□□□□ -0.53
LINC00649-202ENST00000400353 PADI6Q6TGC4 694 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 IRF2BP2Q7Z5L9 587 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 VIPAS39Q9H9C1 493 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 AGPAT3Q9NRZ7 376 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 GCNT4Q9P109 453 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 INTUQ9ULD6 942 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 DHX15O43143 795 aaKnown RBP11.74□□□□□ -0.53
LINC00649-202ENST00000400353 N4BP1O75113 896 aaKnown RBP11.74□□□□□ -0.53
LINC00649-202ENST00000400353 PPP1R37O75864 691 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 FLOT1O75955 427 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 STAT1P42224 750 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 QARSP47897 775 aaKnown RBP11.74□□□□□ -0.53
LINC00649-202ENST00000400353 CASP4P49662 377 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 JAM2P57087 298 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 MTMR1Q13613 665 aa11.74□□□□□ -0.53
LINC00649-202ENST00000400353 CREG2Q8IUH2 290 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms