RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 ECM2O94769 699 aaPredicted RBP8.38□□□□□ -1.07
USP16-204ENST00000399976 CKBP12277 381 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 PTMSP20962 102 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 UBA7P41226 1012 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 SLC12A3P55017 1021 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 TFDP1Q14186 410 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 HSP90AA2PQ14568 343 aaPredicted RBP8.38□□□□□ -1.07
USP16-204ENST00000399976 E2F4Q16254 413 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 UTP14CQ5TAP6 766 aaKnown RBP8.38□□□□□ -1.07
USP16-204ENST00000399976 GPR153Q6NV75 609 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 LRRC8DQ7L1W4 858 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 PHOSPHO2Q8TCD6 241 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 RAD54LQ92698 747 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 PRIMPOLQ96LW4 560 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 DRC1Q96MC2 740 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 MAP7D2Q96T17 732 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 MTRQ99707 1265 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 GDF15Q99988 308 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 FAM13BQ9NYF5 915 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 PRKAG2Q9UGJ0 569 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 KIAA1671Q9BY89 1806 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 IQCF3P0C7M6 154 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 PSMC6P62333 389 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 TBC1D8BQ0IIM8 1120 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 FNDC1Q4ZHG4 1894 aaPredicted RBP8.38□□□□□ -1.07
USP16-204ENST00000399976 PRPF38BQ5VTL8 546 aaKnown RBP8.38□□□□□ -1.07
USP16-204ENST00000399976 KANK3Q6NY19 840 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 CNKSR3Q6P9H4 555 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 FOXR2Q6PJQ5 311 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 FERMT3Q86UX7 667 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 NLRC5Q86WI3 1866 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 TSPAN18Q96SJ8 248 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 TMEM134Q9H6X4 195 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 WRAP73Q9P2S5 460 aaPredicted RBP8.38□□□□□ -1.07
USP16-204ENST00000399976 VWA3AA6NCI4 1184 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 M0QZ92 97 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 GPR32O75388 356 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 CYP2C9P11712 490 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 GAP43P17677 238 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 NAMPTP43490 491 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 FOSBP53539 338 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 HIC1Q14526 733 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 EMC2Q15006 297 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 COBLL1Q53SF7 1204 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 PLEKHG4Q58EX7 1191 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 SMYD5Q6GMV2 418 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 TSHZ1Q6ZSZ6 1077 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 C1orf186Q6ZWK4 172 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 KIAA0319LQ8IZA0 1049 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 HERVK_113Q902F9 699 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 CCDC34Q96HJ3 373 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 SPATA32Q96LK8 384 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 CSRNP2Q9H175 543 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 ADAMTS10Q9H324 1103 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 HIPK3Q9H422 1215 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 ELAC1Q9H777 363 aaKnown RBP8.37□□□□□ -1.07
USP16-204ENST00000399976 C1orf112Q9NSG2 853 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 TMEM39AQ9NV64 488 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 KBTBD4Q9NVX7 518 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 SEPT9Q9UHD8 586 aaPredicted RBP8.37□□□□□ -1.07
USP16-204ENST00000399976 ABHD14A-ACY1A0A1B0GW23 586 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 DDX39AO00148 427 aaKnown RBP8.37□□□□□ -1.07
USP16-204ENST00000399976 INPPL1O15357 1258 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 KLRC1P26715 233 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 EFNA5P52803 228 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 SNRPFP62306 86 aaKnown RBP8.37□□□□□ -1.07
USP16-204ENST00000399976 AMPD3Q01432 767 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 PKP1Q13835 747 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 TRIM50Q86XT4 487 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 IQUBQ8NA54 791 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 BANK1Q8NDB2 785 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 CELF4Q9BZC1 486 aaKnown RBP8.37□□□□□ -1.07
USP16-204ENST00000399976 MTIF3Q9H2K0 278 aaKnown RBP8.37□□□□□ -1.07
USP16-204ENST00000399976 BLOC1S4Q9NUP1 217 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 PCDHA7Q9UN72 937 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 TELO2Q9Y4R8 837 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 TRIM43BA6NCK2 446 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 TREHO43280 583 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 SKIP12755 728 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 ACTN1P12814 892 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 GPC3P51654 580 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 DNM1Q05193 864 aaKnown RBP8.37□□□□□ -1.07
USP16-204ENST00000399976 FPGSQ05932 587 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 NBR1Q14596 966 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 PSPC1Q8WXF1 523 aaKnown RBP8.37□□□□□ -1.07
USP16-204ENST00000399976 LARP4BQ92615 738 aaKnown RBP8.37□□□□□ -1.07
USP16-204ENST00000399976 TRIM43Q96BQ3 446 aaPredicted RBP8.37□□□□□ -1.07
USP16-204ENST00000399976 CDK5RAP3Q96JB5 506 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 ZFP91Q96JP5 570 aaPredicted RBP8.37□□□□□ -1.07
USP16-204ENST00000399976 CEP170P1Q96L14 293 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 WNT8AQ9H1J5 351 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 SETD4Q9NVD3 440 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 PKD2L1Q9P0L9 805 aa8.37□□□□□ -1.07
USP16-204ENST00000399976 PVALEFA0A1B0GWK0 134 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 ARHGEF35A5YM69 484 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 DDX11L8A8MPP1 907 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 CHMP2AO43633 222 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 PIGRP01833 764 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 IRX5P78411 483 aaPredicted RBP8.36□□□□□ -1.07
USP16-204ENST00000399976 SHC4Q6S5L8 630 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms