RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 SYCE1LA8MT33 242 aa12.41□□□□□ -0.42
CCDC144A-206ENST00000399273 VCPP55072 806 aaKnown RBP12.41□□□□□ -0.42
CCDC144A-206ENST00000399273 PPP6R3Q5H9R7 873 aaPredicted RBP12.41□□□□□ -0.42
CCDC144A-206ENST00000399273 LRRC8AQ8IWT6 810 aa12.41□□□□□ -0.42
CCDC144A-206ENST00000399273 SEPT12Q8IYM1 358 aa12.41□□□□□ -0.42
CCDC144A-206ENST00000399273 GCOM2Q9BZD3 368 aaPredicted RBP12.41□□□□□ -0.42
CCDC144A-206ENST00000399273 GPBP1L1Q9HC44 474 aaPredicted RBP12.41□□□□□ -0.42
CCDC144A-206ENST00000399273 MRPL40Q9NQ50 206 aaKnown RBP12.41□□□□□ -0.42
CCDC144A-206ENST00000399273 CHCHD3Q9NX63 227 aaKnown RBP12.41□□□□□ -0.42
CCDC144A-206ENST00000399273 RWDD2AQ9UIY3 292 aa12.41□□□□□ -0.42
CCDC144A-206ENST00000399273 SSH3Q8TE77 659 aa12.41□□□□□ -0.42
CCDC144A-206ENST00000399273 SARS2Q9NP81 518 aaKnown RBP12.41□□□□□ -0.42
CCDC144A-206ENST00000399273 GPR108Q9NPR9 543 aa12.41□□□□□ -0.42
CCDC144A-206ENST00000399273 SH3GLB2Q9NR46 395 aa12.41□□□□□ -0.42
CCDC144A-206ENST00000399273 TPX2Q9ULW0 747 aaKnown RBP12.41□□□□□ -0.42
CCDC144A-206ENST00000399273 RHPN2Q8IUC4 686 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 USP28Q96RU2 1077 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 TBK1Q9UHD2 729 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 USP17L5A8MUK1 530 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 IKBKBO14920 756 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 TRAPPC3O43617 180 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 CDK8P49336 464 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 GABPB1Q06547 395 aaPredicted RBP12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 AP3B2Q13367 1082 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 SNCBQ16143 134 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 OPTNQ96CV9 577 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 ZNF302Q9NR11 478 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 STAP1Q9ULZ2 295 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 THEMIS2Q5TEJ8 643 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 EEF2KMTQ96G04 330 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 PTCH1Q13635 1447 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 RBBP7Q16576 425 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 DCUN1D1Q96GG9 259 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 EMILIN3Q9NT22 766 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 BSDC1Q9NW68 430 aaPredicted RBP12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 RNF181Q9P0P0 153 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 ANGPTL2Q9UKU9 493 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 GTPBP10A4D1E9 387 aaKnown RBP12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 ZNF263O14978 683 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 HSPA4LO95757 839 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 CPB1P15086 417 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 DYNLL1P63167 89 aaKnown RBP12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 TCP11X2Q5H9J9 407 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 SNRNP48Q6IEG0 339 aaKnown RBP12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 SDE2Q6IQ49 451 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 KCNV1Q6PIU1 500 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 ATG3Q9NT62 314 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 PCDHA7Q9UN72 937 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 SRPRBQ9Y5M8 271 aaKnown RBP12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 PALLDQ8WX93 1383 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 PLCG1P19174 1290 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 ZNF827Q17R98 1081 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 ACAD11Q709F0 780 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 RASGRP4Q8TDF6 673 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 SLC26A7Q8TE54 656 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 SPATA33Q96N06 139 aa12.4□□□□□ -0.42
CCDC144A-206ENST00000399273 HMGB3O15347 200 aaKnown RBP12.4□□□□□ -0.43
CCDC144A-206ENST00000399273 ZC3H12BQ5HYM0 836 aaKnown RBP12.4□□□□□ -0.43
CCDC144A-206ENST00000399273 ZMYM1Q5SVZ6 1142 aa12.4□□□□□ -0.43
CCDC144A-206ENST00000399273 FBXO18Q8NFZ0 1043 aa12.4□□□□□ -0.43
CCDC144A-206ENST00000399273 YIPF2Q9BWQ6 316 aa12.4□□□□□ -0.43
CCDC144A-206ENST00000399273 MRPL4Q9BYD3 311 aaKnown RBP12.4□□□□□ -0.43
CCDC144A-206ENST00000399273 TRIM4Q9C037 500 aa12.4□□□□□ -0.43
CCDC144A-206ENST00000399273 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.4□□□□□ -0.43
CCDC144A-206ENST00000399273 EIF3DO15371 548 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 HADHAP40939 763 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 ST8SIA6P61647 398 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 CYP27A1Q02318 531 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 TMED8Q6PL24 325 aaPredicted RBP12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 FBXO41Q8TF61 875 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 RBM41Q96IZ5 413 aaKnown RBP12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 RGS12O14924 1447 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 RPAP1Q9BWH6 1393 aaPredicted RBP12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 SYNGAP1Q96PV0 1343 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 PREX2Q70Z35 1606 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 MAP4P27816 1152 aaKnown RBP12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 EPHB4P54760 987 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 TTC37Q6PGP7 1564 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 RNF14Q9UBS8 474 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 KDM6BO15054 1643 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 GH2P01242 217 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 MMP1P03956 469 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 CRKP46108 304 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 PLTPP55058 493 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 RASIP1Q5U651 963 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 MFN1Q8IWA4 741 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 EGFL8Q99944 293 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 USP44Q9H0E7 712 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 ARIH2O95376 493 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 IFNAR2P48551 515 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 TTC13Q8NBP0 860 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 PIP4K2CQ8TBX8 421 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 PYGBP11216 843 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 TBC1D22BQ9NU19 505 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 UBE4BO95155 1302 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 ZC3H4Q9UPT8 1303 aaKnown RBP12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 NAALADL2Q58DX5 795 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 RHOT2Q8IXI1 618 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 TESK2Q96S53 571 aa12.39□□□□□ -0.43
CCDC144A-206ENST00000399273 KATNAL1Q9BW62 490 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms