RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 SWSAP1Q6NVH7 229 aa12.05□□□□□ -0.48
RGPD2-201ENST00000398146 SPACA7Q96KW9 195 aa12.05□□□□□ -0.48
RGPD2-201ENST00000398146 FOPNLQ96NB1 174 aa12.05□□□□□ -0.48
RGPD2-201ENST00000398146 INTUQ9ULD6 942 aa12.05□□□□□ -0.48
RGPD2-201ENST00000398146 PLS3P13797 630 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 IFNAR2P48551 515 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 OTUD7AQ8TE49 926 aaPredicted RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 SCG3Q8WXD2 468 aaKnown RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 RAPGEF5Q92565 580 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 LARP4BQ92615 738 aaKnown RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 LLPHQ9BRT6 129 aaKnown RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 FAN1Q9Y2M0 1017 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 RRP9O43818 475 aaKnown RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 VAMP4O75379 141 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 CCDC159P0C7I6 412 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 PRAMEP78395 509 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 HDAC1Q13547 482 aaPredicted RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 DEFB128Q7Z7B8 93 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 OR6P1Q8NGX9 317 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 TSSK1BQ9BXA7 367 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 TPX2Q9ULW0 747 aaKnown RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 ADCK5Q3MIX3 580 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 MICALL2Q8IY33 904 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 PUS3Q9BZE2 481 aaKnown RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 UNC45AQ9H3U1 944 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 GEMIN8Q9NWZ8 242 aaKnown RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 PCDHB15Q9Y5E8 787 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 GUCA1CO95843 209 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 MT-ND3P03897 115 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 IMPDH2P12268 514 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 ADD1P35611 737 aaKnown RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 RBM6P78332 1123 aaKnown RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 PARK7Q99497 189 aaKnown RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 MRPL47Q9HD33 250 aaKnown RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 RNF146Q9NTX7 359 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 CPSF2Q9P2I0 782 aaKnown RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 SEL1LQ9UBV2 794 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 TBX22Q9Y458 520 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 TRAPPC3O43617 180 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 DNAJC8O75937 253 aaPredicted RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 HSPA4LO95757 839 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 SP100P23497 879 aaPredicted RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 FCGRTP55899 365 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 ERAP2Q6P179 960 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 PCDHGB4Q9UN71 923 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 SBNO1A3KN83 1393 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 ZKSCAN8Q15776 578 aaPredicted RBP12.04□□□□□ -0.48
RGPD2-201ENST00000398146 ALFQ53S48 1182 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 RASSF3Q86WH2 238 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 PLEKHM2Q8IWE5 1019 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 MAML1Q92585 1016 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 AAASQ9NRG9 546 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 PCDHA4Q9UN74 947 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 GTF2A1LQ9UNN4 478 aa12.04□□□□□ -0.48
RGPD2-201ENST00000398146 FAM47E-STBD1D6RA91 191 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 NOSTRINQ8IVI9 506 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 CNOT6LQ96LI5 555 aaKnown RBP12.03□□□□□ -0.48
RGPD2-201ENST00000398146 PNMA5Q96PV4 448 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 CYP2D7A0A087X1C5 515 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 HSPA1AP0DMV8 641 aaKnown RBP12.03□□□□□ -0.48
RGPD2-201ENST00000398146 HSPA1BP0DMV9 641 aaKnown RBP12.03□□□□□ -0.48
RGPD2-201ENST00000398146 EEF1DP29692 281 aaKnown RBP12.03□□□□□ -0.48
RGPD2-201ENST00000398146 HMGCS2P54868 508 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 GRAPQ13588 217 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 GRAPLQ8TC17 118 aaPredicted RBP12.03□□□□□ -0.48
RGPD2-201ENST00000398146 TSEN34Q9BSV6 310 aaKnown RBP12.03□□□□□ -0.48
RGPD2-201ENST00000398146 PARVGQ9HBI0 331 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 HOMER3Q9NSC5 361 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 POLR3AO14802 1390 aaPredicted RBP12.03□□□□□ -0.48
RGPD2-201ENST00000398146 SETSIPP0DME0 302 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 SPDYAQ5MJ70 313 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 SCYL3Q8IZE3 742 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 RGL4Q8IZJ4 473 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 FAM167AQ96KS9 214 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 DESI2Q9BSY9 194 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 CSE1LP55060 971 aaKnown RBP12.03□□□□□ -0.48
RGPD2-201ENST00000398146 PLCL1Q15111 1095 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 SLFN12LQ6IEE8 588 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 TTC8Q8TAM2 541 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 FAM213AQ9BRX8 229 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 TRIM55Q9BYV6 548 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 RPAP3Q9H6T3 665 aaPredicted RBP12.03□□□□□ -0.48
RGPD2-201ENST00000398146 GOLGA8MH3BSY2 632 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 KCNA2P16389 499 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 SNAPC2Q13487 334 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 ANGPT1Q15389 498 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 DDIASQ8IXT1 998 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 STK17AQ9UEE5 414 aa12.03□□□□□ -0.48
RGPD2-201ENST00000398146 TXNP10599 105 aaKnown RBP12.02□□□□□ -0.48
RGPD2-201ENST00000398146 TRIM32Q13049 653 aa12.02□□□□□ -0.48
RGPD2-201ENST00000398146 RD3Q7Z3Z2 195 aa12.02□□□□□ -0.48
RGPD2-201ENST00000398146 SRRM1Q8IYB3 904 aaKnown RBP12.02□□□□□ -0.48
RGPD2-201ENST00000398146 ABCC4O15439 1325 aa12.02□□□□□ -0.48
RGPD2-201ENST00000398146 C5orf58C9J3I9 102 aa12.02□□□□□ -0.48
RGPD2-201ENST00000398146 FAM133AQ8N9E0 248 aa12.02□□□□□ -0.48
RGPD2-201ENST00000398146 CCHCR1Q8TD31 782 aa12.02□□□□□ -0.48
RGPD2-201ENST00000398146 COA1Q9GZY4 146 aa12.02□□□□□ -0.48
RGPD2-201ENST00000398146 TMEM161AQ9NX61 479 aa12.02□□□□□ -0.48
RGPD2-201ENST00000398146 ZMYM6O95789 1325 aa12.02□□□□□ -0.48
RGPD2-201ENST00000398146 CCL15-CCL14A0A0B4J2E2 113 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms