RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 PBX3P40426 434 aa10.83□□□□□ -0.68
NEDD9-203ENST00000397378 TMEM62Q0P6H9 643 aa10.83□□□□□ -0.68
NEDD9-203ENST00000397378 NFX1Q12986 1120 aaKnown RBP10.83□□□□□ -0.68
NEDD9-203ENST00000397378 HDAC1Q13547 482 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-203ENST00000397378 GRM4Q14833 912 aa10.83□□□□□ -0.68
NEDD9-203ENST00000397378 GRIK4Q16099 956 aa10.83□□□□□ -0.68
NEDD9-203ENST00000397378 MARCH8Q5T0T0 291 aa10.83□□□□□ -0.68
NEDD9-203ENST00000397378 IER5Q5VY09 327 aa10.83□□□□□ -0.68
NEDD9-203ENST00000397378 PCNX4Q63HM2 1172 aa10.83□□□□□ -0.68
NEDD9-203ENST00000397378 FAM43BQ6ZT52 329 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-203ENST00000397378 MRPL43Q8N983 215 aaKnown RBP10.83□□□□□ -0.68
NEDD9-203ENST00000397378 ATRIPQ8WXE1 791 aa10.83□□□□□ -0.68
NEDD9-203ENST00000397378 CWH43Q9H720 699 aa10.83□□□□□ -0.68
NEDD9-203ENST00000397378 ERAP1Q9NZ08 941 aa10.83□□□□□ -0.68
NEDD9-203ENST00000397378 RTEL1Q9NZ71 1219 aa10.83□□□□□ -0.68
NEDD9-203ENST00000397378 DLGAP2Q9P1A6 1054 aa10.83□□□□□ -0.68
NEDD9-203ENST00000397378 IGSF9Q9P2J2 1179 aa10.83□□□□□ -0.68
NEDD9-203ENST00000397378 C2orf71A6NGG8 1288 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 EPCAMP16422 314 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 MARK3P27448 753 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 PDE4AP27815 886 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 PPM1AP35813 382 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 IGBP1P78318 339 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 NONOQ15233 471 aaKnown RBP eCLIP10.82□□□□□ -0.68
NEDD9-203ENST00000397378 TMEM266Q2M3C6 531 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 CWC27Q6UX04 472 aaKnown RBP10.82□□□□□ -0.68
NEDD9-203ENST00000397378 NLRX1Q86UT6 975 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 RSAD2Q8WXG1 361 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 SEPT1Q8WYJ6 367 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 GPRASP2Q96D09 838 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 BORCS6Q96GS4 357 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 TMX1Q9H3N1 280 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 SMARCAD1Q9H4L7 1026 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 GMEB2Q9UKD1 530 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 TRPV2Q9Y5S1 764 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 MIA3Q5JRA6 1907 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 IGSF9BQ9UPX0 1349 aa10.82□□□□□ -0.68
NEDD9-203ENST00000397378 MYH9P35579 1960 aaKnown RBP10.81□□□□□ -0.68
NEDD9-203ENST00000397378 GPR179Q6PRD1 2367 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.81□□□□□ -0.68
NEDD9-203ENST00000397378 GSTTP1A0A1W2PQM5 241 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 DENND3A2RUS2 1198 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 RRN3P2A6NIE6 340 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 HIP1O00291 1037 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 PIK3CDO00329 1044 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 SLC30A4O14863 429 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 LAMTOR5O43504 91 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 FGFR1P11362 822 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 KCNA2P16389 499 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 BMS1Q14692 1282 aaKnown RBP10.81□□□□□ -0.68
NEDD9-203ENST00000397378 ZNF528Q3MIS6 628 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 PHLDB3Q6NSJ2 640 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 KCNT2Q6UVM3 1135 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 CYB5R4Q7L1T6 521 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 CABP7Q86V35 215 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 MAML2Q8IZL2 1156 aaPredicted RBP10.81□□□□□ -0.68
NEDD9-203ENST00000397378 PJA1Q8NG27 643 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 FEZF2Q8TBJ5 459 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 NETO1Q8TDF5 533 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 GPR152Q8TDT2 470 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 ZBTB10Q96DT7 871 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 CDHR1Q96JP9 859 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 ZNF558Q96NG5 402 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 FOXQ1Q9C009 403 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 LNPKQ9C0E8 428 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 OSBPL3Q9H4L5 887 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 PARD6AQ9NPB6 346 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 ARHGEF3Q9NR81 526 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 DIAPH3Q9NSV4 1193 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 SPATA6Q9NWH7 488 aaPredicted RBP10.81□□□□□ -0.68
NEDD9-203ENST00000397378 PCDHGA2Q9Y5H1 932 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.81□□□□□ -0.68
NEDD9-203ENST00000397378 PATJQ8NI35 1801 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 CACNA1IQ9P0X4 2223 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 C2orf16Q68DN1 1984 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 KDM3AQ9Y4C1 1321 aa10.81□□□□□ -0.68
NEDD9-203ENST00000397378 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.8□□□□□ -0.68
NEDD9-203ENST00000397378 SOBPA7XYQ1 873 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 MGEA5O60502 916 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 ATP9AO75110 1047 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 LRRN2O75325 713 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 CXCL14O95715 111 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 SRFP11831 508 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 GLULP15104 373 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 TGM1P22735 817 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 CSTF1Q05048 431 aaKnown RBP10.8□□□□□ -0.68
NEDD9-203ENST00000397378 TROAPQ12815 778 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 DIEXFQ68CQ4 756 aaKnown RBP10.8□□□□□ -0.68
NEDD9-203ENST00000397378 SMARCC2Q8TAQ2 1214 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 GLG1Q92896 1179 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 CUL5Q93034 780 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 ADAM2Q99965 735 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 SFXN1Q9H9B4 322 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 ATP6V0A4Q9HBG4 840 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 C1orf112Q9NSG2 853 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 SPG21Q9NZD8 308 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 FBXO4Q9UKT5 387 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 WDR81Q562E7 1941 aa10.8□□□□□ -0.68
NEDD9-203ENST00000397378 FASNP49327 2511 aaKnown RBP10.8□□□□□ -0.68
NEDD9-203ENST00000397378 MEIS2O14770 477 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms