RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 SEPT9Q9UHD8 586 aaPredicted RBP15.05■□□□□ -0
MCF2L-209ENST00000397036 UBE4BO95155 1302 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 SYNRGQ9UMZ2 1314 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 LRRC10BA6NIK2 292 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 USO1O60763 962 aaKnown RBP15.04■□□□□ -0
MCF2L-209ENST00000397036 FKTNO75072 461 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 LGALS2P05162 132 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 CYBAP13498 195 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 AKR1A1P14550 325 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 ABCD1P33897 745 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 CACNB1Q02641 598 aaPredicted RBP15.04■□□□□ -0
MCF2L-209ENST00000397036 MAP2K1Q02750 393 aaPredicted RBP15.04■□□□□ -0
MCF2L-209ENST00000397036 PRKCZQ05513 592 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 PLCB4Q15147 1175 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 DGKDQ16760 1214 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 PRAMEF19Q5SWL8 479 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 CDKAL1Q5VV42 579 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 PPP4R3CPQ6ZMV5 832 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 PXYLP1Q8TE99 480 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 SCFD1Q8WVM8 642 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 TRIB2Q92519 343 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 HPS3Q969F9 1004 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 PDLIM2Q96JY6 352 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 JPH2Q9BR39 696 aaPredicted RBP15.04■□□□□ -0
MCF2L-209ENST00000397036 C16orf70Q9BSU1 422 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 SEMA6BQ9H3T3 888 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 ZHX3Q9H4I2 956 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 ATP6V0A4Q9HBG4 840 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 CTNND2Q9UQB3 1225 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 MAPK8IP1Q9UQF2 711 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 PCDHB13Q9Y5F0 798 aa15.04■□□□□ -0
MCF2L-209ENST00000397036 IGKV6-21A0A0C4DH24 114 aa15.03■□□□□ -0
MCF2L-209ENST00000397036 DYNC1LI2O43237 492 aaPredicted RBP15.03■□□□□ -0
MCF2L-209ENST00000397036 DUSP11O75319 330 aaKnown RBP15.03■□□□□ -0
MCF2L-209ENST00000397036 MAFO75444 373 aaPredicted RBP15.03■□□□□ -0
MCF2L-209ENST00000397036 PPP1R37O75864 691 aa15.03■□□□□ -0
MCF2L-209ENST00000397036 MMP3P08254 477 aa15.03■□□□□ -0
MCF2L-209ENST00000397036 DEKP35659 375 aaKnown RBP15.03■□□□□ -0
MCF2L-209ENST00000397036 HTRA3P83110 453 aa15.03■□□□□ -0
MCF2L-209ENST00000397036 SPAG1Q07617 926 aa15.03■□□□□ -0
MCF2L-209ENST00000397036 BRDTQ58F21 947 aaPredicted RBP15.03■□□□□ -0
MCF2L-209ENST00000397036 ZNF484Q5JVG2 852 aa15.03■□□□□ -0
MCF2L-209ENST00000397036 ODR4Q5SWX8 454 aa15.03■□□□□ -0
MCF2L-209ENST00000397036 GJC2Q5T442 439 aaPredicted RBP15.03■□□□□ -0
MCF2L-209ENST00000397036 FAM178BQ8IXR5 827 aa15.03■□□□□ -0
MCF2L-209ENST00000397036 PPP1R9BQ96SB3 815 aa15.03■□□□□ -0
MCF2L-209ENST00000397036 DUSP9Q99956 384 aaKnown RBP15.03■□□□□ -0
MCF2L-209ENST00000397036 KCTD10Q9H3F6 313 aa15.03■□□□□ -0
MCF2L-209ENST00000397036 MRPL44Q9H9J2 332 aaKnown RBP15.03■□□□□ -0
MCF2L-209ENST00000397036 XPNPEP1Q9NQW7 623 aa15.03■□□□□ -0
MCF2L-209ENST00000397036 TRAF3IP3Q9Y228 551 aa15.03■□□□□ -0
MCF2L-209ENST00000397036 MGAMO43451 1857 aa15.03■□□□□ -0
MCF2L-209ENST00000397036 MYH9P35579 1960 aaKnown RBP15.03■□□□□ -0
MCF2L-209ENST00000397036 COL1A2P08123 1366 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 TMEM150BA6NC51 233 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 PDXKO00764 312 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 ADCY6O43306 1168 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 KPNA6O60684 536 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 FGFR1OPO95684 399 aaKnown RBP15.02■□□□□ -0
MCF2L-209ENST00000397036 HSPA6P17066 643 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 STX17P56962 302 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 CAP1Q01518 475 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 NFIL3Q16649 462 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 KNOP1Q1ED39 458 aaKnown RBP15.02■□□□□ -0
MCF2L-209ENST00000397036 EDRF1Q3B7T1 1238 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 ZCWPW2Q504Y3 356 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 ANKRD40Q6AI12 368 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 TMEM174Q8WUU8 243 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 SLC7A3Q8WY07 619 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 HVCN1Q96D96 273 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 AP5M1Q9H0R1 490 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 THAP9Q9H5L6 903 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 ZNF215Q9UL58 517 aaPredicted RBP15.02■□□□□ -0
MCF2L-209ENST00000397036 WDR81Q562E7 1941 aa15.02■□□□□ -0
MCF2L-209ENST00000397036 SFI1A8K8P3 1242 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 ZBTB42B2RXF5 422 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 H0YCG3 227 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 H3BRB1 525 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 AP5Z1O43299 807 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 ARL2P36404 184 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 CPT1AP50416 773 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 SMTNP53814 917 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 POLGP54098 1239 aaPredicted RBP15.02□□□□□ -0.01
MCF2L-209ENST00000397036 PMS1P54277 932 aaKnown RBP15.02□□□□□ -0.01
MCF2L-209ENST00000397036 NCKAP1LP55160 1127 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 SNRPFP62306 86 aaKnown RBP15.02□□□□□ -0.01
MCF2L-209ENST00000397036 GTF2BQ00403 316 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 CCDC173Q0VFZ6 552 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 TPD52L1Q16890 204 aaPredicted RBP15.02□□□□□ -0.01
MCF2L-209ENST00000397036 MTERF2Q49AM1 385 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 TLK2Q86UE8 772 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 ZC3H3Q8IXZ2 948 aaKnown RBP15.02□□□□□ -0.01
MCF2L-209ENST00000397036 GLIS3Q8NEA6 775 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 TRPV1Q8NER1 839 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 CD99L2Q8TCZ2 262 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 TSG101Q99816 390 aa15.02□□□□□ -0.01
MCF2L-209ENST00000397036 TUT1Q9H6E5 874 aaKnown RBP15.02□□□□□ -0.01
MCF2L-209ENST00000397036 DOCK5Q9H7D0 1870 aa15.01□□□□□ -0.01
MCF2L-209ENST00000397036 CASP8AP2Q9UKL3 1982 aa15.01□□□□□ -0.01
MCF2L-209ENST00000397036 MAGEB2O15479 319 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms