RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 NPAS4Q8IUM7 802 aa11.7□□□□□ -0.54
NEDD8-202ENST00000396828 CMTR2Q8IYT2 770 aaKnown RBP11.7□□□□□ -0.54
NEDD8-202ENST00000396828 NME8Q8N427 588 aa11.7□□□□□ -0.54
NEDD8-202ENST00000396828 ATP8B4Q8TF62 1192 aa11.7□□□□□ -0.54
NEDD8-202ENST00000396828 PHKBQ93100 1093 aa11.7□□□□□ -0.54
NEDD8-202ENST00000396828 PLVAPQ9BX97 442 aa11.7□□□□□ -0.54
NEDD8-202ENST00000396828 FTHL17Q9BXU8 183 aa11.7□□□□□ -0.54
NEDD8-202ENST00000396828 ZNF302Q9NR11 478 aa11.7□□□□□ -0.54
NEDD8-202ENST00000396828 CLEC1BQ9P126 229 aa11.7□□□□□ -0.54
NEDD8-202ENST00000396828 SMC3Q9UQE7 1217 aa11.7□□□□□ -0.54
NEDD8-202ENST00000396828 RWDD3Q9Y3V2 267 aa11.7□□□□□ -0.54
NEDD8-202ENST00000396828 WDR81Q562E7 1941 aa11.7□□□□□ -0.54
NEDD8-202ENST00000396828 M0QZ92 97 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 HBP1O60381 514 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 RPS6KA5O75582 802 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 CDKL5O76039 1030 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 C22orf31O95567 290 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 VTNP04004 478 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 CYP3A4P08684 503 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 SMAD2Q15796 467 aaKnown RBP11.69□□□□□ -0.54
NEDD8-202ENST00000396828 KIZQ2M2Z5 673 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 PDXDC2PQ6P474 469 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 NIPA1Q7RTP0 329 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 RBM23Q86U06 439 aaKnown RBP11.69□□□□□ -0.54
NEDD8-202ENST00000396828 POF1BQ8WVV4 589 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 P2RX5Q93086 422 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 GJA10Q969M2 543 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 LENG9Q96B70 501 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 MSLNLQ96KJ4 702 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 OSMRQ99650 979 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 ADAM2Q99965 735 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 ZNF577Q9BSK1 485 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 ZMYND12Q9H0C1 365 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 ST3GAL5Q9UNP4 418 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 HCN4Q9Y3Q4 1203 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 MAFBQ9Y5Q3 323 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-202ENST00000396828 DMDP11532 3685 aa11.69□□□□□ -0.54
NEDD8-202ENST00000396828 NID2Q14112 1375 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 MYO15AQ9UKN7 3530 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 PRR33A8MZF0 331 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 hCG_1984214I3L0E3 225 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 GPR32O75388 356 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 GLP2RO95838 553 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 RPLP2P05387 115 aaKnown RBP11.68□□□□□ -0.54
NEDD8-202ENST00000396828 SARSP49591 514 aaKnown RBP11.68□□□□□ -0.54
NEDD8-202ENST00000396828 SLC26A2P50443 739 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 NTRK3Q16288 839 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 ZNF484Q5JVG2 852 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 FAM160B1Q5W0V3 765 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 MIS18BP1Q6P0N0 1132 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 FAM228AQ86W67 206 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 ADHFE1Q8IWW8 467 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 ZNF713Q8N859 430 aaPredicted RBP11.68□□□□□ -0.54
NEDD8-202ENST00000396828 VN1R2Q8NFZ6 395 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 ZNF668Q96K58 619 aaPredicted RBP11.68□□□□□ -0.54
NEDD8-202ENST00000396828 NCOA5Q9HCD5 579 aaKnown RBP11.68□□□□□ -0.54
NEDD8-202ENST00000396828 RGS18Q9NS28 235 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 KIF3AQ9Y496 699 aa11.68□□□□□ -0.54
NEDD8-202ENST00000396828 MYH9P35579 1960 aaKnown RBP11.68□□□□□ -0.54
NEDD8-202ENST00000396828 ESYT2A0FGR8 921 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 TBKBP1A7MCY6 615 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 C9IYK1 514 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 PER2O15055 1255 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 PRPF3O43395 683 aaKnown RBP11.67□□□□□ -0.54
NEDD8-202ENST00000396828 DCXO43602 365 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 NCK2O43639 380 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 ZNF862O60290 1169 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 STAG3L1P0CL83 205 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 FGFR1P11362 822 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 PDIA4P13667 645 aaKnown RBP11.67□□□□□ -0.54
NEDD8-202ENST00000396828 ALADP13716 330 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 NRIP1P48552 1158 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 CLCN3P51790 818 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 ERVFC1P60507 584 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 HMGN5P82970 282 aaKnown RBP11.67□□□□□ -0.54
NEDD8-202ENST00000396828 DSC3Q14574 896 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 PRR16Q569H4 304 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 LRRC55Q6ZSA7 311 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 REXO1Q8N1G1 1221 aaKnown RBP11.67□□□□□ -0.54
NEDD8-202ENST00000396828 METTL13Q8N6R0 699 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 TNPO1Q92973 898 aaKnown RBP11.67□□□□□ -0.54
NEDD8-202ENST00000396828 RNF19AQ9NV58 838 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 GABBR1Q9UBS5 961 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 PRKAG3Q9UGI9 489 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 MUTYHQ9UIF7 546 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 LRFN2Q9ULH4 789 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 BARX2Q9UMQ3 279 aaPredicted RBP11.67□□□□□ -0.54
NEDD8-202ENST00000396828 PCDHB7Q9Y5E2 793 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 COL1A2P08123 1366 aa11.67□□□□□ -0.54
NEDD8-202ENST00000396828 PDCP20941 246 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 GJB2P29033 226 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 NDUFV1P49821 464 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 FAM189BP81408 668 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 ST3GAL1Q11201 340 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 SMAD4Q13485 552 aaKnown RBP11.66□□□□□ -0.54
NEDD8-202ENST00000396828 UGCGQ16739 394 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 NAALADL2Q58DX5 795 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 ZNF746Q6NUN9 644 aaPredicted RBP11.66□□□□□ -0.54
NEDD8-202ENST00000396828 SLC24A5Q71RS6 500 aa11.66□□□□□ -0.54
NEDD8-202ENST00000396828 RNF135Q8IUD6 432 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms