RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 PCDHA13Q9Y5I0 950 aa16.4■□□□□ 0.22
CBX3-202ENST00000396386 SPDYE16A6NNV3 312 aaPredicted RBP16.39■□□□□ 0.22
CBX3-202ENST00000396386 PPP1R37O75864 691 aa16.39■□□□□ 0.22
CBX3-202ENST00000396386 NR3C2P08235 984 aa16.39■□□□□ 0.22
CBX3-202ENST00000396386 YWHABP31946 246 aaKnown RBP16.39■□□□□ 0.22
CBX3-202ENST00000396386 CHMP4BP1P59074 171 aa16.39■□□□□ 0.22
CBX3-202ENST00000396386 PSMC5P62195 406 aa16.39■□□□□ 0.22
CBX3-202ENST00000396386 RAPGEF1Q13905 1077 aa16.39■□□□□ 0.22
CBX3-202ENST00000396386 UGCGQ16739 394 aa16.39■□□□□ 0.22
CBX3-202ENST00000396386 SH3D19Q5HYK7 790 aa16.39■□□□□ 0.22
CBX3-202ENST00000396386 ZNF746Q6NUN9 644 aaPredicted RBP16.39■□□□□ 0.22
CBX3-202ENST00000396386 VSIG10LQ86VR7 867 aa16.39■□□□□ 0.22
CBX3-202ENST00000396386 RBM46Q8TBY0 533 aaKnown RBP16.39■□□□□ 0.22
CBX3-202ENST00000396386 NSUN6Q8TEA1 469 aaKnown RBP16.39■□□□□ 0.22
CBX3-202ENST00000396386 SLC35C1Q96A29 364 aa16.39■□□□□ 0.22
CBX3-202ENST00000396386 SYT17Q9BSW7 474 aa16.39■□□□□ 0.22
CBX3-202ENST00000396386 AGPAT3Q9NRZ7 376 aa16.39■□□□□ 0.22
CBX3-202ENST00000396386 ATP9AO75110 1047 aa16.39■□□□□ 0.21
CBX3-202ENST00000396386 CCNE2O96020 404 aa16.39■□□□□ 0.21
CBX3-202ENST00000396386 AMPD2Q01433 879 aa16.39■□□□□ 0.21
CBX3-202ENST00000396386 PRKG1Q13976 671 aa16.39■□□□□ 0.21
CBX3-202ENST00000396386 ASIC2Q16515 512 aa16.39■□□□□ 0.21
CBX3-202ENST00000396386 EXOC3L4Q17RC7 722 aa16.39■□□□□ 0.21
CBX3-202ENST00000396386 KSR1Q8IVT5 923 aa16.39■□□□□ 0.21
CBX3-202ENST00000396386 RABGGTAQ92696 567 aa16.39■□□□□ 0.21
CBX3-202ENST00000396386 SECISBP2LQ93073 1101 aaKnown RBP16.39■□□□□ 0.21
CBX3-202ENST00000396386 INPP4AQ96PE3 977 aaPredicted RBP16.39■□□□□ 0.21
CBX3-202ENST00000396386 ARID3AQ99856 593 aa16.39■□□□□ 0.21
CBX3-202ENST00000396386 STRA6Q9BX79 667 aa16.39■□□□□ 0.21
CBX3-202ENST00000396386 ARGLU1Q9NWB6 273 aaPredicted RBP16.39■□□□□ 0.21
CBX3-202ENST00000396386 SNCAIPQ9Y6H5 919 aa16.39■□□□□ 0.21
CBX3-202ENST00000396386 GTPBP10A4D1E9 387 aaKnown RBP16.38■□□□□ 0.21
CBX3-202ENST00000396386 MAFGO15525 162 aa16.38■□□□□ 0.21
CBX3-202ENST00000396386 APBA1Q02410 837 aa16.38■□□□□ 0.21
CBX3-202ENST00000396386 VGLL4Q14135 290 aa16.38■□□□□ 0.21
CBX3-202ENST00000396386 ASTE1Q2TB18 679 aaPredicted RBP16.38■□□□□ 0.21
CBX3-202ENST00000396386 GBP6Q6ZN66 633 aa16.38■□□□□ 0.21
CBX3-202ENST00000396386 GPIHBP1Q8IV16 184 aa16.38■□□□□ 0.21
CBX3-202ENST00000396386 SYCP3Q8IZU3 236 aa16.38■□□□□ 0.21
CBX3-202ENST00000396386 GPR161Q8N6U8 529 aaKnown RBP16.38■□□□□ 0.21
CBX3-202ENST00000396386 BORCS6Q96GS4 357 aa16.38■□□□□ 0.21
CBX3-202ENST00000396386 DRC1Q96MC2 740 aa16.38■□□□□ 0.21
CBX3-202ENST00000396386 SENP7Q9BQF6 1050 aa16.38■□□□□ 0.21
CBX3-202ENST00000396386 IKZF4Q9H2S9 585 aa16.38■□□□□ 0.21
CBX3-202ENST00000396386 ADARB2Q9NS39 739 aaKnown RBP16.38■□□□□ 0.21
CBX3-202ENST00000396386 ANKEF1Q9NU02 776 aa16.38■□□□□ 0.21
CBX3-202ENST00000396386 HOXC10Q9NYD6 342 aa16.38■□□□□ 0.21
CBX3-202ENST00000396386 CYP39A1Q9NYL5 469 aa16.38■□□□□ 0.21
CBX3-202ENST00000396386 MYO6Q9UM54 1294 aa16.38■□□□□ 0.21
CBX3-202ENST00000396386 FRMD4BQ9Y2L6 1034 aa16.38■□□□□ 0.21
CBX3-202ENST00000396386 ANO9A1A5B4 782 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 MACROD2A1Z1Q3 448 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 RBAK-RBAKDNI3L0D1 243 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 TLR2O60603 784 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 USP2O75604 605 aaPredicted RBP16.37■□□□□ 0.21
CBX3-202ENST00000396386 PLS3P13797 630 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 CYP2J2P51589 502 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 PLS1Q14651 629 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 MAEAQ7L5Y9 396 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 MOV10L1Q9BXT6 1211 aaKnown RBP16.37■□□□□ 0.21
CBX3-202ENST00000396386 LUC7LQ9NQ29 371 aaKnown RBP16.37■□□□□ 0.21
CBX3-202ENST00000396386 A1CFQ9NQ94 594 aaKnown RBP16.37■□□□□ 0.21
CBX3-202ENST00000396386 DMAC2Q9NW81 257 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 AIPL1Q9NZN9 384 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 GCNT4Q9P109 453 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 PUF60Q9UHX1 559 aaKnown RBP16.37■□□□□ 0.21
CBX3-202ENST00000396386 DCAF8L1A6NGE4 600 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 BACH1O14867 736 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 STAM2O75886 525 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 ACTN1P12814 892 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 SLC9A1P19634 815 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 PON1P27169 355 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 MAGEA1P43355 309 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 MYBPC2Q14324 1141 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 KLHDC7AQ5VTJ3 777 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.37■□□□□ 0.21
CBX3-202ENST00000396386 TRAPPC11Q7Z392 1133 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 SLC9A9Q8IVB4 645 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 CDHR1Q96JP9 859 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 TMEM206Q9H813 350 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 NFASCO94856 1347 aa16.37■□□□□ 0.21
CBX3-202ENST00000396386 LRRC37A2A6NM11 1700 aa16.36■□□□□ 0.21
CBX3-202ENST00000396386 PJA2O43164 708 aa16.36■□□□□ 0.21
CBX3-202ENST00000396386 DKC1O60832 514 aaKnown RBP eCLIP16.36■□□□□ 0.21
CBX3-202ENST00000396386 TACC1O75410 805 aa16.36■□□□□ 0.21
CBX3-202ENST00000396386 DDNO94850 711 aaPredicted RBP16.36■□□□□ 0.21
CBX3-202ENST00000396386 ATP1A1P05023 1023 aaKnown RBP16.36■□□□□ 0.21
CBX3-202ENST00000396386 UCHL3P15374 230 aa16.36■□□□□ 0.21
CBX3-202ENST00000396386 TUBB4BP68371 445 aa16.36■□□□□ 0.21
CBX3-202ENST00000396386 GFPT1Q06210 699 aaPredicted RBP16.36■□□□□ 0.21
CBX3-202ENST00000396386 KLHL30Q0D2K2 578 aa16.36■□□□□ 0.21
CBX3-202ENST00000396386 PPP2R5AQ15172 486 aa16.36■□□□□ 0.21
CBX3-202ENST00000396386 DPY19L2P1Q6NXN4 242 aa16.36■□□□□ 0.21
CBX3-202ENST00000396386 SMAP1Q8IYB5 467 aaPredicted RBP16.36■□□□□ 0.21
CBX3-202ENST00000396386 FAM133AQ8N9E0 248 aa16.36■□□□□ 0.21
CBX3-202ENST00000396386 TRIM58Q8NG06 486 aa16.36■□□□□ 0.21
CBX3-202ENST00000396386 DCPSQ96C86 337 aaKnown RBP16.36■□□□□ 0.21
CBX3-202ENST00000396386 ACCSQ96QU6 501 aa16.36■□□□□ 0.21
CBX3-202ENST00000396386 SPAG5Q96R06 1193 aa16.36■□□□□ 0.21
CBX3-202ENST00000396386 FBXL5Q9UKA1 691 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms