RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 MIER3Q7Z3K6 550 aa18.47■□□□□ 0.55
DDR1-229ENST00000396342 RTN4RL1Q86UN2 441 aaPredicted RBP18.47■□□□□ 0.55
DDR1-229ENST00000396342 ADHFE1Q8IWW8 467 aa18.47■□□□□ 0.55
DDR1-229ENST00000396342 TMEM87AQ8NBN3 555 aa18.47■□□□□ 0.55
DDR1-229ENST00000396342 RDM1Q8NG50 284 aa18.47■□□□□ 0.55
DDR1-229ENST00000396342 NLRP7Q8WX94 980 aa18.47■□□□□ 0.55
DDR1-229ENST00000396342 JPH2Q9BR39 696 aaPredicted RBP18.47■□□□□ 0.55
DDR1-229ENST00000396342 TLE6Q9H808 572 aa18.47■□□□□ 0.55
DDR1-229ENST00000396342 RC3H2Q9HBD1 1191 aaKnown RBP18.47■□□□□ 0.55
DDR1-229ENST00000396342 TMEM161AQ9NX61 479 aa18.47■□□□□ 0.55
DDR1-229ENST00000396342 ARIH1Q9Y4X5 557 aaPredicted RBP18.47■□□□□ 0.55
DDR1-229ENST00000396342 COL4A4P53420 1690 aaPredicted RBP18.47■□□□□ 0.55
DDR1-229ENST00000396342 CHD7Q9P2D1 2997 aa18.46■□□□□ 0.55
DDR1-229ENST00000396342 NID2Q14112 1375 aa18.46■□□□□ 0.55
DDR1-229ENST00000396342 MICAL3Q7RTP6 2002 aa18.46■□□□□ 0.55
DDR1-229ENST00000396342 EIF5BO60841 1220 aaKnown RBP18.46■□□□□ 0.55
DDR1-229ENST00000396342 VTNP04004 478 aa18.46■□□□□ 0.55
DDR1-229ENST00000396342 ITGB1P05556 798 aa18.46■□□□□ 0.55
DDR1-229ENST00000396342 PLA2G5P39877 138 aa18.46■□□□□ 0.55
DDR1-229ENST00000396342 NLRP11P59045 1033 aaKnown RBP18.46■□□□□ 0.55
DDR1-229ENST00000396342 HYAL1Q12794 435 aa18.46■□□□□ 0.55
DDR1-229ENST00000396342 PKN1Q16512 942 aa18.46■□□□□ 0.55
DDR1-229ENST00000396342 RNF169Q8NCN4 708 aa18.46■□□□□ 0.55
DDR1-229ENST00000396342 RASGRP4Q8TDF6 673 aa18.46■□□□□ 0.55
DDR1-229ENST00000396342 LINC01599Q8WXQ3 324 aa18.46■□□□□ 0.55
DDR1-229ENST00000396342 INO80BQ9C086 356 aaPredicted RBP18.46■□□□□ 0.55
DDR1-229ENST00000396342 ELAC1Q9H777 363 aaKnown RBP18.46■□□□□ 0.55
DDR1-229ENST00000396342 DACT1Q9NYF0 836 aa18.46■□□□□ 0.55
DDR1-229ENST00000396342 PCDHA4Q9UN74 947 aa18.46■□□□□ 0.55
DDR1-229ENST00000396342 KAT6AQ92794 2004 aa18.45■□□□□ 0.54
DDR1-229ENST00000396342 SIP14410 1827 aa18.45■□□□□ 0.54
DDR1-229ENST00000396342 CARNS1A5YM72 827 aa18.45■□□□□ 0.54
DDR1-229ENST00000396342 PRR33A8MZF0 331 aa18.45■□□□□ 0.54
DDR1-229ENST00000396342 PPM1AP35813 382 aa18.45■□□□□ 0.54
DDR1-229ENST00000396342 CLCN3P51790 818 aa18.45■□□□□ 0.54
DDR1-229ENST00000396342 PRKCEQ02156 737 aa18.45■□□□□ 0.54
DDR1-229ENST00000396342 EFHBQ8N7U6 833 aa18.45■□□□□ 0.54
DDR1-229ENST00000396342 SPPL3Q8TCT6 385 aa18.45■□□□□ 0.54
DDR1-229ENST00000396342 TBCKQ8TEA7 893 aa18.45■□□□□ 0.54
DDR1-229ENST00000396342 CRYGNQ8WXF5 182 aa18.45■□□□□ 0.54
DDR1-229ENST00000396342 ZNF274Q96GC6 653 aaPredicted RBP18.45■□□□□ 0.54
DDR1-229ENST00000396342 CDCA3Q99618 268 aaPredicted RBP18.45■□□□□ 0.54
DDR1-229ENST00000396342 NAP1L4Q99733 375 aaKnown RBP18.45■□□□□ 0.54
DDR1-229ENST00000396342 SLKQ9H2G2 1235 aaPredicted RBP18.45■□□□□ 0.54
DDR1-229ENST00000396342 TLR9Q9NR96 1032 aa18.45■□□□□ 0.54
DDR1-229ENST00000396342 CCDC194A0A1B0GVG4 234 aa18.44■□□□□ 0.54
DDR1-229ENST00000396342 EIF4BP23588 611 aaKnown RBP18.44■□□□□ 0.54
DDR1-229ENST00000396342 NRIP1P48552 1158 aa18.44■□□□□ 0.54
DDR1-229ENST00000396342 COL19A1Q14993 1142 aa18.44■□□□□ 0.54
DDR1-229ENST00000396342 NONOQ15233 471 aaKnown RBP eCLIP18.44■□□□□ 0.54
DDR1-229ENST00000396342 SMAD2Q15796 467 aaKnown RBP18.44■□□□□ 0.54
DDR1-229ENST00000396342 XKR3Q5GH77 459 aa18.44■□□□□ 0.54
DDR1-229ENST00000396342 KRT25Q7Z3Z0 450 aa18.44■□□□□ 0.54
DDR1-229ENST00000396342 RBM23Q86U06 439 aaKnown RBP18.44■□□□□ 0.54
DDR1-229ENST00000396342 EXOC8Q8IYI6 725 aa18.44■□□□□ 0.54
DDR1-229ENST00000396342 BLIDQ8IZY5 108 aa18.44■□□□□ 0.54
DDR1-229ENST00000396342 AGXT2Q9BYV1 514 aa18.44■□□□□ 0.54
DDR1-229ENST00000396342 GCOM2Q9BZD3 368 aaPredicted RBP18.44■□□□□ 0.54
DDR1-229ENST00000396342 TMEM117Q9H0C3 514 aa18.44■□□□□ 0.54
DDR1-229ENST00000396342 TMX1Q9H3N1 280 aa18.44■□□□□ 0.54
DDR1-229ENST00000396342 NCOA5Q9HCD5 579 aaKnown RBP18.44■□□□□ 0.54
DDR1-229ENST00000396342 PDRG1Q9NUG6 133 aa18.44■□□□□ 0.54
DDR1-229ENST00000396342 SEPT9Q9UHD8 586 aaPredicted RBP18.44■□□□□ 0.54
DDR1-229ENST00000396342 TCF20Q9UGU0 1960 aaKnown RBP18.43■□□□□ 0.54
DDR1-229ENST00000396342 FAM86C2PA6NEL3 165 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 C9IYK1 514 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 MSH4O15457 936 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 FGF18O76093 207 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 SKIP12755 728 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 SFPQP23246 707 aaKnown RBP eCLIP18.43■□□□□ 0.54
DDR1-229ENST00000396342 ADAM15Q13444 863 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 CTC1Q2NKJ3 1217 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 FAM228AQ86W67 206 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 LRRC43Q8N309 656 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 RSPH1Q8WYR4 309 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 WASF1Q92558 559 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 ZNF558Q96NG5 402 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 TM6SF1Q9BZW5 370 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 CDHR5Q9HBB8 845 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 ZSWIM6Q9HCJ5 1215 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 ENTPD7Q9NQZ7 604 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 BDP1A6H8Y1 2624 aa18.43■□□□□ 0.54
DDR1-229ENST00000396342 ATP4AP20648 1035 aa18.42■□□□□ 0.54
DDR1-229ENST00000396342 CA8P35219 290 aa18.42■□□□□ 0.54
DDR1-229ENST00000396342 EVCP57679 992 aa18.42■□□□□ 0.54
DDR1-229ENST00000396342 ZP2Q05996 745 aa18.42■□□□□ 0.54
DDR1-229ENST00000396342 STK3Q13188 491 aa18.42■□□□□ 0.54
DDR1-229ENST00000396342 NTRK3Q16288 839 aa18.42■□□□□ 0.54
DDR1-229ENST00000396342 Q4G0T1 1027 aa18.42■□□□□ 0.54
DDR1-229ENST00000396342 LRRC71Q8N4P6 559 aa18.42■□□□□ 0.54
DDR1-229ENST00000396342 COLGALT1Q8NBJ5 622 aa18.42■□□□□ 0.54
DDR1-229ENST00000396342 TMEM40Q8WWA1 233 aa18.42■□□□□ 0.54
DDR1-229ENST00000396342 SLC5A5Q92911 643 aa18.42■□□□□ 0.54
DDR1-229ENST00000396342 MRPL9Q9BYD2 267 aaKnown RBP18.42■□□□□ 0.54
DDR1-229ENST00000396342 BRMS1Q9HCU9 246 aa18.42■□□□□ 0.54
DDR1-229ENST00000396342 TYW1Q9NV66 732 aaKnown RBP18.42■□□□□ 0.54
DDR1-229ENST00000396342 DDX25Q9UHL0 483 aaKnown RBP18.42■□□□□ 0.54
DDR1-229ENST00000396342 PTPRSQ13332 1948 aa18.42■□□□□ 0.54
DDR1-229ENST00000396342 SPTBN5Q9NRC6 3674 aaKnown RBP18.42■□□□□ 0.54
DDR1-229ENST00000396342 DDX11L8A8MPP1 907 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms