RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 GIT2Q14161 759 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 ASTE1Q2TB18 679 aaPredicted RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 WLSQ5T9L3 541 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 DPH6Q7L8W6 267 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 LDHDQ86WU2 507 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 MICALL2Q8IY33 904 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 COA7Q96BR5 231 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 DESI2Q9BSY9 194 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 PAGR1Q9BTK6 254 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 REPIN1Q9BWE0 567 aaKnown RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 UBA5Q9GZZ9 404 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 FBXO40Q9UH90 709 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 SNCAIPQ9Y6H5 919 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 ADGRA2Q96PE1 1338 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 ZMYM2Q9UBW7 1377 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 CTAGE15A4D2H0 777 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 SPATA31C2B4DYI2 1134 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 CES2O00748 559 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 DKC1O60832 514 aaKnown RBP eCLIP5.88□□□□□ -1.47
VPS41-203ENST00000395969 USP2O75604 605 aaPredicted RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 PARNO95453 639 aaKnown RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 RHOXF2BP0C7M4 288 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 CTAGE8P0CG41 777 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 INPP5BP32019 993 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 NCKAP1LP55160 1127 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 ADKP55263 362 aaKnown RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 POU5F1BQ06416 359 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 NEDD9Q14511 834 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 MTF1Q14872 753 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 KRT31Q15323 416 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 NBPF9Q3BBW0 867 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 PREPLQ4J6C6 727 aaPredicted RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 GBP6Q6ZN66 633 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 KCTD1Q719H9 257 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 CTAGE6Q86UF2 777 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 VSIG10LQ86VR7 867 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 CATSPER3Q86XQ3 398 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 TMTC1Q8IUR5 882 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 TRIM59Q8IWR1 403 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 CTAGE4Q8IX94 777 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 ACER1Q8TDN7 264 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 SYTL5Q8TDW5 730 aaPredicted RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 NELFBQ8WX92 580 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 GLMNQ92990 594 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 ZKSCAN4Q969J2 545 aaPredicted RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 RHOXF2Q9BQY4 288 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 TMEM39BQ9GZU3 492 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 SEMA6BQ9H3T3 888 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 SPON1Q9HCB6 807 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 BIN2Q9UBW5 565 aaPredicted RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 SSU72P8A0A1W2PR75 194 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 CTAGE9A4FU28 777 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 TMCO5BA8MYB1 307 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 USP17L15C9J2P7 530 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 USP17L13C9JLJ4 530 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 USP17L11C9JVI0 530 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 USP17L18D6R9N7 530 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 USP17L22D6RA61 530 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 USP17L17D6RBQ6 530 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 USP17L19D6RCP7 530 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 USP17L20D6RJB6 530 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 EIF3HO15372 352 aaKnown RBP eCLIP5.88□□□□□ -1.47
VPS41-203ENST00000395969 KIF5CO60282 957 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 SLITRK3O94933 977 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 TGFB3P10600 412 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 PRLRP16471 622 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 ELF1P32519 619 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 KRT76Q01546 638 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 USP17L24Q0WX57 530 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 PPFIA1Q13136 1202 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 GRM1Q13255 1194 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 NBPF20Q3BBV1 942 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 NAIF1Q69YI7 327 aaPredicted RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 RAD9BQ6WBX8 426 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 CCDC84Q86UT8 332 aaPredicted RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 NOA1Q8NC60 698 aaKnown RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 COG1Q8WTW3 980 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 FBXL18Q96ME1 805 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 SH3GL2Q99962 352 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 JPH2Q9BR39 696 aaPredicted RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 NIFKQ9BYG3 293 aaKnown RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 GPCPD1Q9NPB8 672 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 HOXC10Q9NYD6 342 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 A0A0U1RQJ8 604 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 TARSL2A2RTX5 802 aaKnown RBP5.87□□□□□ -1.47
VPS41-203ENST00000395969 SOWAHDA6NJG2 315 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 SPDYE3A6NKU9 549 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 KCNJ18B7U540 433 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 LGR5O75473 907 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 PAX3P23760 479 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 MCM3P25205 808 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 GTF2H1P32780 548 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 HOXD13P35453 343 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 PRKCIP41743 596 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 HIRAP54198 1017 aaPredicted RBP5.87□□□□□ -1.47
VPS41-203ENST00000395969 COASYQ13057 564 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 MAPK7Q13164 816 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 KCNJ12Q14500 433 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 PGM5Q15124 567 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 MAN2A1Q16706 1144 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms