RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 RPS6KA5O75582 802 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 RB1P06400 928 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 SFNP31947 248 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 CTNNB1P35222 781 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 JAK3P52333 1124 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 FAM189BP81408 668 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 DRP2Q13474 957 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 NONOQ15233 471 aaKnown RBP eCLIP18.26■□□□□ 0.51
CXCL12-206ENST00000395795 AAK1Q2M2I8 961 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 TCEAL5Q5H9L2 206 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 CKAP2LQ8IYA6 745 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 CMTR2Q8IYT2 770 aaKnown RBP18.26■□□□□ 0.51
CXCL12-206ENST00000395795 LRRC71Q8N4P6 559 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 NECAB1Q8N987 351 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.26■□□□□ 0.51
CXCL12-206ENST00000395795 HAS1Q92839 578 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 FAM167AQ96KS9 214 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 RGS18Q9NS28 235 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 RNF19AQ9NV58 838 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 VAV3Q9UKW4 847 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 GINS2Q9Y248 185 aa18.26■□□□□ 0.51
CXCL12-206ENST00000395795 IGKV6-21A0A0C4DH24 114 aa18.25■□□□□ 0.51
CXCL12-206ENST00000395795 MAGEB2O15479 319 aa18.25■□□□□ 0.51
CXCL12-206ENST00000395795 DNAJB1P25685 340 aa18.25■□□□□ 0.51
CXCL12-206ENST00000395795 SARSP49591 514 aaKnown RBP18.25■□□□□ 0.51
CXCL12-206ENST00000395795 NFX1Q12986 1120 aaKnown RBP18.25■□□□□ 0.51
CXCL12-206ENST00000395795 BTG3Q14201 252 aaPredicted RBP18.25■□□□□ 0.51
CXCL12-206ENST00000395795 EFCAB12Q6NXP0 572 aa18.25■□□□□ 0.51
CXCL12-206ENST00000395795 KRT25Q7Z3Z0 450 aa18.25■□□□□ 0.51
CXCL12-206ENST00000395795 BANK1Q8NDB2 785 aa18.25■□□□□ 0.51
CXCL12-206ENST00000395795 RDM1Q8NG50 284 aa18.25■□□□□ 0.51
CXCL12-206ENST00000395795 NEK9Q8TD19 979 aa18.25■□□□□ 0.51
CXCL12-206ENST00000395795 ADAM2Q99965 735 aa18.25■□□□□ 0.51
CXCL12-206ENST00000395795 NIFKQ9BYG3 293 aaKnown RBP18.25■□□□□ 0.51
CXCL12-206ENST00000395795 CD320Q9NPF0 282 aa18.25■□□□□ 0.51
CXCL12-206ENST00000395795 HCSTQ9UBK5 93 aa18.25■□□□□ 0.51
CXCL12-206ENST00000395795 SAMM50Q9Y512 469 aa18.25■□□□□ 0.51
CXCL12-206ENST00000395795 LTBRP36941 435 aa18.24■□□□□ 0.51
CXCL12-206ENST00000395795 LEXMQ3ZCV2 418 aa18.24■□□□□ 0.51
CXCL12-206ENST00000395795 CPLX2Q6PUV4 134 aaKnown RBP18.24■□□□□ 0.51
CXCL12-206ENST00000395795 METTL13Q8N6R0 699 aa18.24■□□□□ 0.51
CXCL12-206ENST00000395795 WRAP73Q9P2S5 460 aaPredicted RBP18.24■□□□□ 0.51
CXCL12-206ENST00000395795 DDX25Q9UHL0 483 aaKnown RBP18.24■□□□□ 0.51
CXCL12-206ENST00000395795 PLAGL2Q9UPG8 496 aa18.24■□□□□ 0.51
CXCL12-206ENST00000395795 CEP131Q9UPN4 1083 aa18.24■□□□□ 0.51
CXCL12-206ENST00000395795 FNDC1Q4ZHG4 1894 aaPredicted RBP18.23■□□□□ 0.51
CXCL12-206ENST00000395795 WNT7AO00755 349 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 CDKL5O76039 1030 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 ITGB1P05556 798 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 GPC3P51654 580 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 NLRP11P59045 1033 aaKnown RBP18.23■□□□□ 0.51
CXCL12-206ENST00000395795 SPIRE1Q08AE8 756 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 PPP2R5CQ13362 524 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 PTPROQ16827 1216 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 CTC1Q2NKJ3 1217 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 TIGD5Q53EQ6 642 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 FAM102BQ5T8I3 360 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 PPP4R3AQ6IN85 833 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 FAM43BQ6ZT52 329 aaPredicted RBP18.23■□□□□ 0.51
CXCL12-206ENST00000395795 MIER3Q7Z3K6 550 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 NSUN7Q8NE18 718 aaKnown RBP18.23■□□□□ 0.51
CXCL12-206ENST00000395795 SPPL3Q8TCT6 385 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 KHSRPQ92945 711 aaKnown RBP eCLIP18.23■□□□□ 0.51
CXCL12-206ENST00000395795 GTF3C6Q969F1 213 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 ZNF668Q96K58 619 aaPredicted RBP18.23■□□□□ 0.51
CXCL12-206ENST00000395795 SH2D3AQ9BRG2 576 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 C11orf84Q9BUA3 381 aaPredicted RBP18.23■□□□□ 0.51
CXCL12-206ENST00000395795 PLVAPQ9BX97 442 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 NSUN3Q9H649 340 aaKnown RBP18.23■□□□□ 0.51
CXCL12-206ENST00000395795 NRBP2Q9NSY0 501 aa18.23■□□□□ 0.51
CXCL12-206ENST00000395795 ORC3Q9UBD5 711 aaPredicted RBP18.23■□□□□ 0.51
CXCL12-206ENST00000395795 GPR182O15218 404 aa18.22■□□□□ 0.51
CXCL12-206ENST00000395795 MMP1P03956 469 aa18.22■□□□□ 0.51
CXCL12-206ENST00000395795 KCNA5P22460 613 aa18.22■□□□□ 0.51
CXCL12-206ENST00000395795 NR5A1Q13285 461 aa18.22■□□□□ 0.51
CXCL12-206ENST00000395795 LETM2Q2VYF4 491 aa18.22■□□□□ 0.51
CXCL12-206ENST00000395795 PAN2Q504Q3 1202 aaKnown RBP18.22■□□□□ 0.51
CXCL12-206ENST00000395795 XKR3Q5GH77 459 aa18.22■□□□□ 0.51
CXCL12-206ENST00000395795 SLC24A5Q71RS6 500 aa18.22■□□□□ 0.51
CXCL12-206ENST00000395795 ANO5Q75V66 913 aa18.22■□□□□ 0.51
CXCL12-206ENST00000395795 NEK8Q86SG6 692 aa18.22■□□□□ 0.51
CXCL12-206ENST00000395795 P2RX5Q93086 422 aa18.22■□□□□ 0.51
CXCL12-206ENST00000395795 LMAN2LQ9H0V9 348 aa18.22■□□□□ 0.51
CXCL12-206ENST00000395795 ALG13Q9NP73 1137 aaKnown RBP18.22■□□□□ 0.51
CXCL12-206ENST00000395795 C1orf112Q9NSG2 853 aa18.22■□□□□ 0.51
CXCL12-206ENST00000395795 RWDD3Q9Y3V2 267 aa18.22■□□□□ 0.51
CXCL12-206ENST00000395795 BDP1A6H8Y1 2624 aa18.22■□□□□ 0.51
CXCL12-206ENST00000395795 JAK2O60674 1132 aa18.21■□□□□ 0.51
CXCL12-206ENST00000395795 STAG3L1P0CL83 205 aa18.21■□□□□ 0.51
CXCL12-206ENST00000395795 DARSP14868 501 aaKnown RBP18.21■□□□□ 0.51
CXCL12-206ENST00000395795 EIF4BP23588 611 aaKnown RBP18.21■□□□□ 0.51
CXCL12-206ENST00000395795 GTF2F1P35269 517 aaKnown RBP eCLIP18.21■□□□□ 0.51
CXCL12-206ENST00000395795 HYAL1Q12794 435 aa18.21■□□□□ 0.51
CXCL12-206ENST00000395795 ANKRD1Q15327 319 aa18.21■□□□□ 0.51
CXCL12-206ENST00000395795 PIK3AP1Q6ZUJ8 805 aa18.21■□□□□ 0.51
CXCL12-206ENST00000395795 ZNF579Q8NAF0 562 aaKnown RBP18.21■□□□□ 0.51
CXCL12-206ENST00000395795 KLHL23Q8NBE8 558 aa18.21■□□□□ 0.51
CXCL12-206ENST00000395795 PABPC5Q96DU9 382 aaKnown RBP18.21■□□□□ 0.51
CXCL12-206ENST00000395795 TCEAL9Q9UHQ7 104 aa18.21■□□□□ 0.51
CXCL12-206ENST00000395795 FGFR1P11362 822 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms