RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 FNBP1Q96RU3 617 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 MYCBPQ99417 103 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 REEP2Q9BRK0 252 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 IMPG2Q9BZV3 1241 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 TRIM7Q9C029 511 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 SLC16A3O15427 465 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 PDE6CP51160 858 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 PLCB3Q01970 1234 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 LIN9Q5TKA1 542 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 KDM7AQ6ZMT4 941 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 ANKRD42Q8N9B4 389 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 RNPC3Q96LT9 517 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 SUGT1Q9Y2Z0 365 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 SNX24Q9Y343 169 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 SYNGAP1Q96PV0 1343 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 FAM196BA6NMK8 535 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 TULP2O00295 520 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 EPHB6O15197 1021 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 GLI1P08151 1106 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 TBC1D16Q8TBP0 767 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 UBXN6Q9BZV1 441 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 A0A1B0GUA9 196 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 SOX5P35711 763 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 SLMAPQ14BN4 828 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 GOLPH3Q9H4A6 298 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 NAGPAQ9UK23 515 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 TOGARAM1Q9Y4F4 1720 aa12.63□□□□□ -0.39
UBE2D3-209ENST00000394804 TBX3O15119 743 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 BUB1BO60566 1050 aaPredicted RBP12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 EYA4O95677 639 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 GALCP54803 685 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 CCDC127Q96BQ5 260 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 ZNF653Q96CK0 615 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 SHISA4Q96DD7 197 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 PACSIN1Q9BY11 444 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 TMEM206Q9H813 350 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 ANKRD62A6NC57 917 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 PLSCR1O15162 318 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 SLC8A1P32418 973 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 CACNB3P54284 484 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 TMEM119Q4V9L6 283 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 COBLL1Q53SF7 1204 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 MEI1Q5TIA1 1274 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 CCDC125Q86Z20 511 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 MTMR9Q96QG7 549 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 CAMKK2Q96RR4 588 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 NUDT12Q9BQG2 462 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 EIF2AK1Q9BQI3 630 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 PCIF1Q9H4Z3 704 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 DBNDD1Q9H9R9 158 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 SEL1LQ9UBV2 794 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 MYH7P12883 1935 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 FAM187AA6NFU0 413 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 PODXLO00592 558 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 RGL2O15211 777 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 TTI1O43156 1089 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 ADRA2BP18089 450 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 STX2P32856 288 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 MXI1P50539 228 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 STAT2P52630 851 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 ADCY2Q08462 1091 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 PRR5LQ6MZQ0 368 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 CPXCR1Q8N123 301 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 CCDC63Q8NA47 563 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 GRK7Q8WTQ7 553 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 ACCSQ96QU6 501 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 TTYH3Q9C0H2 523 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 SIPA1L3O60292 1781 aaPredicted RBP12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 MYH2Q9UKX2 1941 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 F5H6K3 240 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 MYBP10242 640 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 RPA1P27694 616 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 PDE6BP35913 854 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 CRKP46108 304 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 MFAP3P55082 362 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 KLRC3Q07444 240 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 ZNF211Q13398 564 aaPredicted RBP12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 PTGISQ16647 500 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 C6orf118Q5T5N4 469 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 LRRC55Q6ZSA7 311 aa12.62□□□□□ -0.39
UBE2D3-209ENST00000394804 DDX42Q86XP3 938 aaKnown RBP eCLIP12.62□□□□□ -0.394e-7■■■□□ 18.4
UBE2D3-209ENST00000394804 RASGRF2O14827 1237 aa12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 ECEL1O95672 775 aa12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 SLCO1A2P46721 670 aa12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 VPS41P49754 854 aa12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 FBXW10Q5XX13 1052 aa12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 SCFD1Q8WVM8 642 aa12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 CSRNP1Q96S65 589 aa12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 MMTAG2Q9BU76 263 aaKnown RBP12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 EVI5O60447 810 aa12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 MYCLP12524 364 aaPredicted RBP12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 ALDH3A1P30838 453 aa12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 SEC24CP53992 1094 aa12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 KCNK18Q7Z418 384 aa12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 METTL13Q8N6R0 699 aa12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 TSEN2Q8NCE0 465 aaKnown RBP12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 OR2W6PQ8NHA6 318 aa12.61□□□□□ -0.39
UBE2D3-209ENST00000394804 BAP1Q92560 729 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms