RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	USO1	O60763	962 aa	Known RBP	10.13	□□□□□ -0.79
MITF-205	ENST00000394348	PRPF6	O94906	941 aa	Known RBP	10.13	□□□□□ -0.79
MITF-205	ENST00000394348	XRCC5	P13010	732 aa	Known RBP	10.13	□□□□□ -0.79
MITF-205	ENST00000394348	EIF2AK2	P19525	551 aa	Known RBP	10.13	□□□□□ -0.79
MITF-205	ENST00000394348	SCP2	P22307	547 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	ABCD1	P33897	745 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	RARRES1	P49788	294 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	HMGCS2	P54868	508 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	PSMC5	P62195	406 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	HERVK_113	P62684	666 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	RAD51AP2	Q09MP3	1159 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	KCNH2	Q12809	1159 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	MAPK7	Q13164	816 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.13	□□□□□ -0.79
MITF-205	ENST00000394348	PPP2R5A	Q15172	486 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	SPA17	Q15506	151 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	WHAMMP3	Q1A5X7	153 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	ZNF569	Q5MCW4	686 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	SNRNP48	Q6IEG0	339 aa	Known RBP	10.13	□□□□□ -0.79
MITF-205	ENST00000394348	PADI6	Q6TGC4	694 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
MITF-205	ENST00000394348	CACNA2D4	Q7Z3S7	1137 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	KIAA1328	Q86T90	577 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	PIGO	Q8TEQ8	1089 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
MITF-205	ENST00000394348	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10.13	□□□□□ -0.79
MITF-205	ENST00000394348	JAKMIP2	Q96AA8	810 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	EEF2KMT	Q96G04	330 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	BORCS6	Q96GS4	357 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	DRC1	Q96MC2	740 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	IWS1	Q96ST2	819 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	CRISPLD2	Q9H0B8	497 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	TMEM206	Q9H813	350 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	SPON1	Q9HCB6	807 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	LUC7L	Q9NQ29	371 aa	Known RBP	10.13	□□□□□ -0.79
MITF-205	ENST00000394348	FAM207A	Q9NSI2	230 aa	Predicted RBP	10.13	□□□□□ -0.79
MITF-205	ENST00000394348	DMAC2	Q9NW81	257 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	AIPL1	Q9NZN9	384 aa		10.13	□□□□□ -0.79
MITF-205	ENST00000394348	WRAP73	Q9P2S5	460 aa	Predicted RBP	10.13	□□□□□ -0.79
MITF-205	ENST00000394348	PFAS	O15067	1338 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	MYH11	P35749	1972 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	OTOF	Q9HC10	1997 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	LRRC53	A6NM62	1247 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	NKRF	O15226	690 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
MITF-205	ENST00000394348	PJA2	O43164	708 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	TGFB1I1	O43294	461 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	HIP1R	O75146	1068 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	NOL4	O94818	638 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	SERPING1	P05155	500 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	COPB2	P35606	906 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	PSMC2	P35998	433 aa	Known RBP	10.12	□□□□□ -0.79
MITF-205	ENST00000394348	HIRA	P54198	1017 aa	Predicted RBP	10.12	□□□□□ -0.79
MITF-205	ENST00000394348	MCCD1	P59942	119 aa	Predicted RBP	10.12	□□□□□ -0.79
MITF-205	ENST00000394348	ENPEP	Q07075	957 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	BAAT	Q14032	418 aa	Predicted RBP	10.12	□□□□□ -0.79
MITF-205	ENST00000394348	DSG2	Q14126	1118 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	TMEM132B	Q14DG7	1078 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	ASTE1	Q2TB18	679 aa	Predicted RBP	10.12	□□□□□ -0.79
MITF-205	ENST00000394348	GNPTAB	Q3T906	1256 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	SLC9C1	Q4G0N8	1177 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	SFMBT2	Q5VUG0	894 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	NSMF	Q6X4W1	530 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	LBX2	Q6XYB7	198 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	SLC35F6	Q8N357	371 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.12	□□□□□ -0.79
MITF-205	ENST00000394348	BANK1	Q8NDB2	785 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	DNER	Q8NFT8	737 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	UBXN4	Q92575	508 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	KCNN1	Q92952	543 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	MARVELD3	Q96A59	401 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	LSM14B	Q9BX40	385 aa	Known RBP	10.12	□□□□□ -0.79
MITF-205	ENST00000394348	GBP3	Q9H0R5	595 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	GAN	Q9H2C0	597 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	C17orf75	Q9HAS0	396 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	HOMER2	Q9NSB8	354 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	ARHGAP20	Q9P2F6	1191 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	FBXO40	Q9UH90	709 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	KCNG1	Q9UIX4	513 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	SCAF8	Q9UPN6	1271 aa	Known RBP	10.12	□□□□□ -0.79
MITF-205	ENST00000394348	BZW2	Q9Y6E2	419 aa	Known RBP	10.12	□□□□□ -0.79
MITF-205	ENST00000394348	SNCAIP	Q9Y6H5	919 aa		10.12	□□□□□ -0.79
MITF-205	ENST00000394348	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.11	□□□□□ -0.79
MITF-205	ENST00000394348	EPHB6	O15197	1021 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	USP2	O75604	605 aa	Predicted RBP	10.11	□□□□□ -0.79
MITF-205	ENST00000394348	AKAP3	O75969	853 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	GFPT2	O94808	682 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	TUBB	P07437	444 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	NR3C2	P08235	984 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	PLS3	P13797	630 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	H2AFX	P16104	143 aa	Predicted RBP	10.11	□□□□□ -0.79
MITF-205	ENST00000394348	RFX1	P22670	979 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	YWHAB	P31946	246 aa	Known RBP	10.11	□□□□□ -0.79
MITF-205	ENST00000394348	ICAM3	P32942	547 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	KIF11	P52732	1056 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	RTP1	P59025	263 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	FOXK1	P85037	733 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	RBM10	P98175	930 aa	Known RBP	10.11	□□□□□ -0.79
MITF-205	ENST00000394348	KIF5A	Q12840	1032 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	EXOC3L4	Q17RC7	722 aa		10.11	□□□□□ -0.79
MITF-205	ENST00000394348	ODR4	Q5SWX8	454 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms