RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 KIAA0319Q5VV43 1072 aa12.53□□□□□ -0.4
VTI1BP2-201ENST00000394154 ANKRD54Q6NXT1 300 aa12.53□□□□□ -0.4
VTI1BP2-201ENST00000394154 FAM177A1Q8N128 213 aaPredicted RBP12.53□□□□□ -0.4
VTI1BP2-201ENST00000394154 NSUN6Q8TEA1 469 aaKnown RBP12.53□□□□□ -0.4
VTI1BP2-201ENST00000394154 PIBF1Q8WXW3 757 aa12.53□□□□□ -0.4
VTI1BP2-201ENST00000394154 RTP3Q9BQQ7 232 aa12.53□□□□□ -0.4
VTI1BP2-201ENST00000394154 MAF1Q9H063 256 aa12.53□□□□□ -0.4
VTI1BP2-201ENST00000394154 RIOX1Q9H6W3 641 aa12.53□□□□□ -0.4
VTI1BP2-201ENST00000394154 SEC63Q9UGP8 760 aaKnown RBP12.53□□□□□ -0.4
VTI1BP2-201ENST00000394154 MRVI1Q9Y6F6 885 aa12.53□□□□□ -0.4
VTI1BP2-201ENST00000394154 FRMPD2Q68DX3 1309 aaPredicted RBP12.53□□□□□ -0.4
VTI1BP2-201ENST00000394154 hCG_1642624A0A1W2PR95 340 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 C2CD4DB7Z1M9 353 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 ENPP3O14638 875 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 SMIM10L2AP0DMW4 78 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 SMIM10L2BP0DMW5 78 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 GNAT1P11488 350 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 HOXB8P17481 243 aaPredicted RBP12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 TECP42680 631 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 RESTQ13127 1097 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 FOXD4L6Q3SYB3 417 aaPredicted RBP12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 PDE12Q6L8Q7 609 aaKnown RBP12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 SYCE2Q6PIF2 218 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 ZC3H14Q6PJT7 736 aaKnown RBP12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 FOXD4L3Q6VB84 417 aaPredicted RBP12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 BRAPQ7Z569 592 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 SPATA33Q96N06 139 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 NECTIN4Q96NY8 510 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 C16orf70Q9BSU1 422 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 UBA5Q9GZZ9 404 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 VAT1LQ9HCJ6 419 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 BRMS1Q9HCU9 246 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 SH3GLB2Q9NR46 395 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 ATRXP46100 2492 aa12.52□□□□□ -0.41
VTI1BP2-201ENST00000394154 PI15O43692 258 aa12.51□□□□□ -0.41
VTI1BP2-201ENST00000394154 CYTH3O43739 400 aa12.51□□□□□ -0.41
VTI1BP2-201ENST00000394154 EIF3JO75822 258 aaKnown RBP12.51□□□□□ -0.41
VTI1BP2-201ENST00000394154 KCNC3Q14003 757 aa12.51□□□□□ -0.41
VTI1BP2-201ENST00000394154 MYSM1Q5VVJ2 828 aa12.51□□□□□ -0.41
VTI1BP2-201ENST00000394154 ATL3Q6DD88 541 aa12.51□□□□□ -0.41
VTI1BP2-201ENST00000394154 RASGRP4Q8TDF6 673 aa12.51□□□□□ -0.41
VTI1BP2-201ENST00000394154 CCDC12Q8WUD4 166 aaPredicted RBP12.51□□□□□ -0.41
VTI1BP2-201ENST00000394154 ZNF396Q96N95 335 aaPredicted RBP12.51□□□□□ -0.41
VTI1BP2-201ENST00000394154 APOL5Q9BWW9 433 aa12.51□□□□□ -0.41
VTI1BP2-201ENST00000394154 RNPEPQ9H4A4 650 aa12.51□□□□□ -0.41
VTI1BP2-201ENST00000394154 SSUH2Q9Y2M2 353 aa12.51□□□□□ -0.41
VTI1BP2-201ENST00000394154 R4GN57 208 aa12.51□□□□□ -0.41
VTI1BP2-201ENST00000394154 OTOGLQ3ZCN5 2332 aa12.51□□□□□ -0.41
VTI1BP2-201ENST00000394154 MYH15Q9Y2K3 1946 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 PKD1L2Q7Z442 2459 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 USP24Q9UPU5 2620 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 PNMA6FA0A0J9YX94 578 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 H3BRB1 525 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 hCG_1984214I3L0E3 225 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 ASGR2P07307 311 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 GHRP10912 638 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 NPR3P17342 541 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 NCLP19338 710 aaKnown RBP12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 NLRP5P59047 1200 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 KRT85P78386 507 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 SLC35G1Q2M3R5 365 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 HSDL1Q3SXM5 330 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 TPRNQ4KMQ1 711 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 CELF3Q5SZQ8 465 aaKnown RBP12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 CES5AQ6NT32 575 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 NPAS4Q8IUM7 802 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 ADGRF4Q8IZF3 695 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 ZDHHC14Q8IZN3 488 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 ZNF713Q8N859 430 aaPredicted RBP12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 CCDC148Q8NFR7 591 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 TAAR1Q96RJ0 339 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 PIGSQ96S52 555 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 RMDN3Q96TC7 470 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 FOXP1Q9H334 677 aaPredicted RBP12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 CPVLQ9H3G5 476 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 POMKQ9H5K3 350 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 TUT1Q9H6E5 874 aaKnown RBP12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 EHMT1Q9H9B1 1298 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 GJB4Q9NTQ9 266 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 VPS54Q9P1Q0 977 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 CFAP45Q9UL16 551 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 KCNJ14Q9UNX9 436 aa12.5□□□□□ -0.41
VTI1BP2-201ENST00000394154 CHRNA1P02708 482 aa12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 U2AF2P26368 475 aaKnown RBP eCLIP12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 KRT2P35908 639 aa12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 DNM1Q05193 864 aaKnown RBP12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 ACAP1Q15027 740 aa12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 USH1GQ495M9 461 aa12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 PAN2Q504Q3 1202 aaKnown RBP12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 ARHGEF16Q5VV41 709 aa12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 GALNT17Q6IS24 598 aa12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 KCNV1Q6PIU1 500 aa12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 HEATR3Q7Z4Q2 680 aa12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 HOMER1Q86YM7 354 aa12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 DIS3L2Q8IYB7 885 aaKnown RBP12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 TDRD5Q8NAT2 981 aaKnown RBP12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 SYTL5Q8TDW5 730 aaPredicted RBP12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 CHAMP1Q96JM3 812 aa12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 PHF20Q9BVI0 1012 aa12.49□□□□□ -0.41
VTI1BP2-201ENST00000394154 SCAND2PQ9GZW5 306 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms