RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 COBLO75128 1261 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 GNRH1P01148 92 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 PLCG1P19174 1290 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 GARTP22102 1010 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 CUL4BQ13620 913 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 C1orf53Q5VUE5 145 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 KLHL10Q6JEL2 608 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 SLC30A10Q6XR72 485 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 LDHDQ86WU2 507 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 SCYL3Q8IZE3 742 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 CYP2W1Q8TAV3 490 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 WNK4Q96J92 1243 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 RPAP3Q9H6T3 665 aaPredicted RBP6.55□□□□□ -1.36
CASC3-202ENST00000394114 TTC12Q9H892 705 aaPredicted RBP6.55□□□□□ -1.36
CASC3-202ENST00000394114 RAVER2Q9HCJ3 691 aaKnown RBP6.55□□□□□ -1.36
CASC3-202ENST00000394114 DISC1Q9NRI5 854 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 ADARB2Q9NS39 739 aaKnown RBP6.55□□□□□ -1.36
CASC3-202ENST00000394114 CCPG1Q9ULG6 757 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 SH3BP1Q9Y3L3 701 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 RPS6KL1Q9Y6S9 549 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 SERTM1A2A2V5 107 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 LAD1O00515 517 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 ASMTLO95671 621 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 ALAS1P13196 640 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 PTPRAP18433 802 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 GSTT1P30711 240 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 PRPHP41219 470 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 HLTFQ14527 1009 aaKnown RBP eCLIP6.55□□□□□ -1.36
CASC3-202ENST00000394114 TM4SF20Q53R12 229 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 PRR16Q569H4 304 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 RRAGBQ5VZM2 374 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 KANK3Q6NY19 840 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 XKR5Q6UX68 686 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 MOB2Q70IA6 237 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 CABP7Q86V35 215 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 DRC7Q8IY82 874 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 ZNF280CQ8ND82 737 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 SNX29Q8TEQ0 813 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 HAS1Q92839 578 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 DCPSQ96C86 337 aaKnown RBP6.55□□□□□ -1.36
CASC3-202ENST00000394114 KLRG1Q96E93 195 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 HOOK2Q96ED9 719 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 MTMR9Q96QG7 549 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 SLF1Q9BQI6 1058 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 KIAA1683Q9H0B3 1180 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 ZNF700Q9H0M5 742 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 RANBP17Q9H2T7 1088 aaKnown RBP6.55□□□□□ -1.36
CASC3-202ENST00000394114 ZFYVE28Q9HCC9 887 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 AVENQ9NQS1 362 aaPredicted RBP6.55□□□□□ -1.36
CASC3-202ENST00000394114 UBP1Q9NZI7 540 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 LRWD1Q9UFC0 647 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 FEM1BQ9UK73 627 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 SYNPO2Q9UMS6 1093 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 PTCH2Q9Y6C5 1203 aa6.55□□□□□ -1.36
CASC3-202ENST00000394114 MORC2Q9Y6X9 1032 aaPredicted RBP6.55□□□□□ -1.36
CASC3-202ENST00000394114 FAM86B1E9PN63 330 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 NFIBO00712 420 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 WDR46O15213 610 aaKnown RBP6.54□□□□□ -1.36
CASC3-202ENST00000394114 CAVIN2O95810 425 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 MYL1P05976 194 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 FAM86B2P0C5J1 330 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 HOXB1P14653 301 aaPredicted RBP6.54□□□□□ -1.36
CASC3-202ENST00000394114 GRIN2CQ14957 1233 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 LRRC41Q15345 812 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 FAM160B2Q86V87 743 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 CHAC2Q8WUX2 184 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 MMTAG2Q9BU76 263 aaKnown RBP6.54□□□□□ -1.36
CASC3-202ENST00000394114 SFMBT1Q9UHJ3 866 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 ZNF536O15090 1300 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 COL11A1P12107 1806 aaPredicted RBP6.54□□□□□ -1.36
CASC3-202ENST00000394114 USP2O75604 605 aaPredicted RBP6.54□□□□□ -1.36
CASC3-202ENST00000394114 SMC2O95347 1197 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 ATP1A3P13637 1013 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 BACE1P56817 501 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 STX17P56962 302 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 MCL1Q07820 350 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 TEAD4Q15561 434 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 CCDC85BQ15834 202 aaPredicted RBP6.54□□□□□ -1.36
CASC3-202ENST00000394114 PTPN21Q16825 1174 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 TMEM266Q2M3C6 531 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 SUPT20HL1Q3ZLR7 823 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 PPP4R3AQ6IN85 833 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 IGSF22Q8N9C0 903 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 C3orf58Q8NDZ4 430 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 LPAR1Q92633 364 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 ATG4CQ96DT6 458 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 CCDC34Q96HJ3 373 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 GLT8D2Q9H1C3 349 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 CCDC39Q9UFE4 941 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 ZNF112Q9UJU3 913 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 CTDP1Q9Y5B0 961 aaPredicted RBP6.54□□□□□ -1.36
CASC3-202ENST00000394114 PHIPQ8WWQ0 1821 aa6.54□□□□□ -1.36
CASC3-202ENST00000394114 GCOM1H8Y6P7 765 aaPredicted RBP6.53□□□□□ -1.36
CASC3-202ENST00000394114 PEX10O60683 326 aa6.53□□□□□ -1.36
CASC3-202ENST00000394114 POLR2MP0CAP2 368 aa6.53□□□□□ -1.36
CASC3-202ENST00000394114 SARSP49591 514 aaKnown RBP6.53□□□□□ -1.36
CASC3-202ENST00000394114 ZNF75DP51815 510 aa6.53□□□□□ -1.36
CASC3-202ENST00000394114 AP3B2Q13367 1082 aa6.53□□□□□ -1.36
CASC3-202ENST00000394114 VGLL4Q14135 290 aa6.53□□□□□ -1.36
CASC3-202ENST00000394114 MORC3Q14149 939 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms