RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 USP17L20D6RJB6 530 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 C21orf2O43822 256 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 PMS2P54278 862 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 CDK17Q00537 523 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 ITIH3Q06033 890 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 USP17L24Q0WX57 530 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 UBE4AQ14139 1066 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 VPS72Q15906 364 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 EXOC3L4Q17RC7 722 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 USP17L6PQ6QN14 398 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 NSMFQ6X4W1 530 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 ZNF662Q6ZS27 426 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 FMNL3Q8IVF7 1028 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 TPCN2Q8NHX9 752 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 INTUQ9ULD6 942 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 ANKRD63C9JTQ0 380 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 H2AFZP0C0S5 128 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 HNRNPH3P31942 346 aaKnown RBP15.76■□□□□ 0.11
SFXN3-202ENST00000393459 GJC1P36383 396 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 FIGNQ5HY92 759 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 H2AFVQ71UI9 128 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 EMILIN3Q9NT22 766 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 PCDHGC5Q9Y5F6 944 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 BCL9LQ86UU0 1499 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 SSU72P8A0A1W2PR75 194 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 PPIP5K2O43314 1243 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 PSMC6P62333 389 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 XRCC4Q13426 336 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 TAF11Q15544 211 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 FAM43BQ6ZT52 329 aaPredicted RBP15.76■□□□□ 0.11
SFXN3-202ENST00000393459 GUF1Q8N442 669 aaKnown RBP15.76■□□□□ 0.11
SFXN3-202ENST00000393459 CTNNBL1Q8WYA6 563 aaPredicted RBP15.76■□□□□ 0.11
SFXN3-202ENST00000393459 ARHGEF26Q96DR7 871 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 FAM129AQ9BZQ8 928 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 GCNT4Q9P109 453 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 C15orf41Q9Y2V0 281 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 SUGT1Q9Y2Z0 365 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 NUP98P52948 1817 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 GOLGA6L10A0A0M3HER8 536 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 MGRN1O60291 552 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 TRIM49P0CI25 452 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 TRIM49CP0CI26 452 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 PCK1P35558 622 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 MESDQ14696 234 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 CRYMQ14894 314 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 ERMARDQ5T6L9 678 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 DAB2IPQ5VWQ8 1189 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 TTBK2Q6IQ55 1244 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 CCDC105Q8IYK2 499 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 SLC35G2Q8TBE7 412 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 RAD54LQ92698 747 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 KRT35Q92764 455 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 ZNF622Q969S3 477 aaKnown RBP eCLIP15.75■□□□□ 0.11
SFXN3-202ENST00000393459 C8orf37Q96NL8 207 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 ATP6V0A4Q9HBG4 840 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 MAP3K13O43283 966 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 CALCAP01258 141 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 BIRC3Q13489 604 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 CUL1Q13616 776 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 FAM98CQ17RN3 349 aaKnown RBP15.75■□□□□ 0.11
SFXN3-202ENST00000393459 PARP10Q53GL7 1025 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 C2CD6Q53TS8 623 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 ZNF572Q7Z3I7 529 aaPredicted RBP15.75■□□□□ 0.11
SFXN3-202ENST00000393459 CD302Q8IX05 232 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 NEK9Q8TD19 979 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 SPOCK2Q92563 424 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 SH2D3AQ9BRG2 576 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 AMFRQ9UKV5 643 aa15.75■□□□□ 0.11
SFXN3-202ENST00000393459 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.75■□□□□ 0.11
SFXN3-202ENST00000393459 CICQ96RK0 1608 aaPredicted RBP15.75■□□□□ 0.11
SFXN3-202ENST00000393459 MYBP10242 640 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 RBM26Q5T8P6 1007 aaKnown RBP15.74■□□□□ 0.11
SFXN3-202ENST00000393459 MREGQ8N565 214 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 SCFD2Q8WU76 684 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 RMDN2Q96LZ7 410 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 PIDD1Q9HB75 910 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 ETNK1Q9HBU6 452 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 A1CFQ9NQ94 594 aaKnown RBP15.74■□□□□ 0.11
SFXN3-202ENST00000393459 METTL5Q9NRN9 209 aaKnown RBP15.74■□□□□ 0.11
SFXN3-202ENST00000393459 CHMP2AO43633 222 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 RFC4P35249 363 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 KCTD1Q719H9 257 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 SCFD1Q8WVM8 642 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 ALG3Q92685 438 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 BRIP1Q9BX63 1249 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 ARMCX3Q9UH62 379 aaPredicted RBP15.74■□□□□ 0.11
SFXN3-202ENST00000393459 ANAPC4Q9UJX5 808 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 PCDHA12Q9UN75 941 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 MINPP1Q9UNW1 487 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 PPP1R12AO14974 1030 aaPredicted RBP15.74■□□□□ 0.11
SFXN3-202ENST00000393459 CETN3O15182 167 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 SPAG7O75391 227 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 LCA5LO95447 670 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 CYP2J2P51589 502 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 ITPK1Q13572 414 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 DCAF12L1Q5VU92 463 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 CEP95Q96GE4 821 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 CALR3Q96L12 384 aaKnown RBP15.74■□□□□ 0.11
SFXN3-202ENST00000393459 EYA3Q99504 573 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 THAP2Q9H0W7 228 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms