RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ANKRD52Q8NB46 1076 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 PCYOX1LQ8NBM8 494 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 KLHL6Q8WZ60 621 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 RMI1Q9H9A7 625 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 RSAD1Q9HA92 442 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.96□□□□□ -1.78
XRN1-202ENST00000392981 DPP7Q9UHL4 492 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 GPR52Q9Y2T5 361 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 CENPJQ9HC77 1338 aaPredicted RBP3.96□□□□□ -1.78
XRN1-202ENST00000392981 CECR2Q9BXF3 1484 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 DAPK3O43293 454 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 CYP11A1P05108 521 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 MMEP08473 750 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 SPARCP09486 303 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 KRT13P13646 458 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 XPAP23025 273 aaPredicted RBP3.96□□□□□ -1.78
XRN1-202ENST00000392981 TDO2P48775 406 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 EVCP57679 992 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 CRELD2Q6UXH1 353 aaPredicted RBP3.96□□□□□ -1.78
XRN1-202ENST00000392981 UNC45BQ8IWX7 931 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 DCAF4Q8WV16 495 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 COA7Q96BR5 231 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 C3orf49Q96BT1 292 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 IQCDQ96DY2 449 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 C1GALT1C1Q96EU7 318 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 SLC39A13Q96H72 371 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 MAELQ96JY0 434 aaKnown RBP3.96□□□□□ -1.78
XRN1-202ENST00000392981 PRPF18Q99633 342 aaKnown RBP3.96□□□□□ -1.78
XRN1-202ENST00000392981 SARS2Q9NP81 518 aaKnown RBP3.96□□□□□ -1.78
XRN1-202ENST00000392981 OXSMQ9NWU1 459 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 ZSCAN32Q9NX65 697 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 WHRNQ9P202 907 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 PRDM4Q9UKN5 801 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 USP18Q9UMW8 372 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 TRIM33Q9UPN9 1127 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 AQP12BA6NM10 295 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 H0YC42 278 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 CBX4O00257 560 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 FCHO1O14526 889 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 PLOD3O60568 738 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 AFPP02771 609 aaKnown RBP3.96□□□□□ -1.78
XRN1-202ENST00000392981 TYRP1P17643 537 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 CAPN3P20807 821 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 MSX1P28360 303 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 HIRAP54198 1017 aaPredicted RBP3.96□□□□□ -1.78
XRN1-202ENST00000392981 COL13A1Q5TAT6 717 aaPredicted RBP3.96□□□□□ -1.78
XRN1-202ENST00000392981 GADL1Q6ZQY3 521 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 SLC44A2Q8IWA5 706 aaPredicted RBP3.96□□□□□ -1.78
XRN1-202ENST00000392981 COLGALT2Q8IYK4 626 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 CNTROBQ8N137 903 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 FIBCD1Q8N539 461 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 RBBP8NLQ8NC74 664 aaPredicted RBP3.96□□□□□ -1.78
XRN1-202ENST00000392981 NUDT8Q8WV74 236 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 UHRF1Q96T88 793 aaPredicted RBP3.96□□□□□ -1.78
XRN1-202ENST00000392981 PBX4Q9BYU1 374 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 AATFQ9NY61 560 aaKnown RBP eCLIP3.96□□□□□ -1.78
XRN1-202ENST00000392981 ZDHHC3Q9NYG2 299 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 SH3BGRL2Q9UJC5 107 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 hCG_1807616A0A1W2PRN6 198 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 CCDC154A6NI56 674 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 MYO1CO00159 1063 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 RPLP2P05387 115 aaKnown RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 TSPY4P0CV99 314 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 TSPY10P0CW01 314 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 ITIH2P19823 946 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 PDCP20941 246 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 CASP6P55212 293 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 SPEM2Q0P670 501 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 PFKFB4Q16877 469 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 FBXW5Q969U6 566 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 CENPTQ96BT3 561 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 ZIC5Q96T25 663 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 PAIP2Q9BPZ3 127 aaKnown RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 GSX2Q9BZM3 304 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 MMADHCQ9H3L0 296 aaPredicted RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 RASSF1Q9NS23 344 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 F8W031 263 aaPredicted RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 BUB1BO60566 1050 aaPredicted RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 HSPA1AP0DMV8 641 aaKnown RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 HSPA1BP0DMV9 641 aaKnown RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 BMP6P22004 513 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 MAOBP27338 520 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 CCR9P51686 369 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 CDC16Q13042 620 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 NAA25Q14CX7 972 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 GJC2Q5T442 439 aaPredicted RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 SPATA1Q5VX52 437 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 CPZQ66K79 652 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 TLDC1Q6P9B6 456 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 MIGA2Q7L4E1 593 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 MROH2BQ7Z745 1585 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 GALNT5Q7Z7M9 940 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 C7orf31Q8N865 590 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 RTF1Q92541 710 aaKnown RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 DPF2Q92785 391 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 ATP2A3Q93084 1043 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 SH3KBP1Q96B97 665 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 LRRIQ1Q96JM4 1722 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 FNBP1Q96RU3 617 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms