RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 RHOT2Q8IXI1 618 aa17.27■□□□□ 0.36
SHANK1-204ENST00000391814 OR2W6PQ8NHA6 318 aa17.27■□□□□ 0.36
SHANK1-204ENST00000391814 PI4K2BQ8TCG2 481 aa17.27■□□□□ 0.36
SHANK1-204ENST00000391814 RUBCNQ92622 972 aa17.27■□□□□ 0.36
SHANK1-204ENST00000391814 SNF8Q96H20 258 aa17.27■□□□□ 0.36
SHANK1-204ENST00000391814 MYOM2P54296 1465 aa17.27■□□□□ 0.35
SHANK1-204ENST00000391814 GOLGA8CPA6NN73 597 aa17.27■□□□□ 0.35
SHANK1-204ENST00000391814 POLGP54098 1239 aaPredicted RBP17.27■□□□□ 0.35
SHANK1-204ENST00000391814 MED21Q13503 144 aa17.27■□□□□ 0.35
SHANK1-204ENST00000391814 CYLC2Q14093 348 aaPredicted RBP17.27■□□□□ 0.35
SHANK1-204ENST00000391814 ZBTB8OSQ8IWT0 167 aa17.27■□□□□ 0.35
SHANK1-204ENST00000391814 DPF2Q92785 391 aa17.27■□□□□ 0.35
SHANK1-204ENST00000391814 CHMP2BQ9UQN3 213 aa17.27■□□□□ 0.35
SHANK1-204ENST00000391814 BTKQ06187 659 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 FBXO11Q86XK2 927 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 TTC25Q96NG3 672 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 KLC2Q9H0B6 622 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 GYG1P46976 350 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 AP1B1Q10567 949 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 IRX2Q9BZI1 471 aaPredicted RBP17.26■□□□□ 0.35
SHANK1-204ENST00000391814 MRPL40Q9NQ50 206 aaKnown RBP17.26■□□□□ 0.35
SHANK1-204ENST00000391814 MID2Q9UJV3 735 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 DBR1Q9UK59 544 aaKnown RBP17.26■□□□□ 0.35
SHANK1-204ENST00000391814 LAMB3Q13751 1172 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 OLA1Q9NTK5 396 aaKnown RBP17.26■□□□□ 0.35
SHANK1-204ENST00000391814 ATP11BQ9Y2G3 1177 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 COPS2P61201 443 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 CAV1Q03135 178 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 LRRC63Q05C16 580 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 MKRN3Q13064 507 aaKnown RBP17.26■□□□□ 0.35
SHANK1-204ENST00000391814 PARP10Q53GL7 1025 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 TRPM8Q7Z2W7 1104 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 TEKT2Q9UIF3 430 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 ZBED1O96006 694 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 SLC44A4Q53GD3 710 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 ADNPQ9H2P0 1102 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 COG4Q9H9E3 785 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 F5H423 210 aaPredicted RBP17.26■□□□□ 0.35
SHANK1-204ENST00000391814 KLC3Q6P597 504 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 KIRREL3Q8IZU9 778 aa17.26■□□□□ 0.35
SHANK1-204ENST00000391814 USP15Q9Y4E8 981 aaPredicted RBP17.26■□□□□ 0.35
SHANK1-204ENST00000391814 HNRNPDLO14979 420 aaKnown RBP17.25■□□□□ 0.35
SHANK1-204ENST00000391814 PLA2G4BP0C869 781 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 SPATA4Q8NEY3 305 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 KCNG1Q9UIX4 513 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 HLA-DPA1P20036 260 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 NECTIN1Q15223 517 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 LRIG3Q6UXM1 1119 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 FLCNQ8NFG4 579 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 E9PMD0 336 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 VCAM1P19320 739 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 RINLQ6ZS11 566 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 ZBED8Q8IZ13 594 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 AGGF1Q8N302 714 aaeCLIP17.25■□□□□ 0.35
SHANK1-204ENST00000391814 ANKRD36BP1Q96IX9 119 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 RNPC3Q96LT9 517 aaKnown RBP17.25■□□□□ 0.35
SHANK1-204ENST00000391814 SEPT9Q9UHD8 586 aaPredicted RBP17.25■□□□□ 0.35
SHANK1-204ENST00000391814 PRPSAP2O60256 369 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 TAC1P20366 129 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 CRYMQ14894 314 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 CATSPER1Q8NEC5 780 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 TEKT4Q8WW24 435 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 GLG1Q92896 1179 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 VPS11Q9H270 941 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 TRIM10Q9UDY6 481 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 SYNMO15061 1565 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 WDR64B1ANS9 1081 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 ANGPTL8Q6UXH0 198 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.25■□□□□ 0.35
SHANK1-204ENST00000391814 BTBD6Q96KE9 485 aa17.25■□□□□ 0.35
SHANK1-204ENST00000391814 APOA1P02647 267 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 CDO1Q16878 200 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 LONRF1Q17RB8 773 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 CYB5D1Q6P9G0 228 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 PARD3BQ8TEW8 1205 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 UBN1Q9NPG3 1134 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 USP40Q9NVE5 1235 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 ANAPC7Q9UJX3 599 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.24■□□□□ 0.35
SHANK1-204ENST00000391814 RPAP1Q9BWH6 1393 aaPredicted RBP17.24■□□□□ 0.35
SHANK1-204ENST00000391814 CD58P19256 250 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 AGR3Q8TD06 166 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 DNAJC12Q9UKB3 198 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 GRIN2AQ12879 1464 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 GOLGA8IPA6NC78 632 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 GOLGA8JA6NMD2 632 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 PDIA2Q13087 525 aaKnown RBP17.24■□□□□ 0.35
SHANK1-204ENST00000391814 SMAD1Q15797 465 aaKnown RBP17.24■□□□□ 0.35
SHANK1-204ENST00000391814 PNMA2Q9UL42 364 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 FNDC3AQ9Y2H6 1198 aaKnown RBP17.24■□□□□ 0.35
SHANK1-204ENST00000391814 DEAF1O75398 565 aaPredicted RBP17.24■□□□□ 0.35
SHANK1-204ENST00000391814 CCDC137Q6PK04 289 aaKnown RBP17.24■□□□□ 0.35
SHANK1-204ENST00000391814 HMGXB3Q12766 1538 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 ESRRBO95718 433 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 PSMA2P25787 234 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 NSUN2Q08J23 767 aaKnown RBP eCLIP17.24■□□□□ 0.35
SHANK1-204ENST00000391814 CAPRIN1Q14444 709 aaKnown RBP17.24■□□□□ 0.35
SHANK1-204ENST00000391814 BRDTQ58F21 947 aaPredicted RBP17.24■□□□□ 0.35
SHANK1-204ENST00000391814 KRT27Q7Z3Y8 459 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 PUS3Q9BZE2 481 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms