RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 CACNB3P54284 484 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 SUMO3P55854 103 aaPredicted RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ERVK-24P63145 666 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 PHC1P78364 1004 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 POU4F1Q01851 419 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ID3Q02535 119 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 CACNB2Q08289 660 aaPredicted RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 MAP3K12Q12852 859 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 PRKG2Q13237 762 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 TUSC3Q13454 348 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 NEUROD1Q13562 356 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 PRKG1Q13976 671 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 TTLL4Q14679 1199 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 MBTPS1Q14703 1052 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 STARD3Q14849 445 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 TMEM132BQ14DG7 1078 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 SUZ12Q15022 739 aaKnown RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 DLGAP5Q15398 846 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 SEC23AQ15436 765 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ZNF174Q15697 407 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 SMAD1Q15797 465 aaKnown RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 GRIK5Q16478 980 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 PCSK7Q16549 785 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 IFI16Q16666 785 aaKnown RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 FAM110CQ1W6H9 321 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 MPEG1Q2M385 716 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 CCDC157Q569K6 752 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 C3orf38Q5JPI3 329 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 SPATA1Q5VX52 437 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 FAM205BPQ63HN1 556 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 CPZQ66K79 652 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 MSL1Q68DK7 614 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 TTLL5Q6EMB2 1281 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 PSAPL1Q6NUJ1 521 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ENOSF1Q7L5Y1 443 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 MAEAQ7L5Y9 396 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 OTOP1Q7RTM1 612 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 TMC3Q7Z5M5 1100 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 SESTD1Q86VW0 696 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 CPOQ8IVL8 374 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 RBM12BQ8IXT5 1001 aaKnown RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 FTSJ3Q8IY81 847 aaKnown RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 TXLNBQ8N3L3 684 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 CRACR2BQ8N4Y2 399 aaPredicted RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 CCDC33Q8N5R6 958 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 MSL3Q8N5Y2 521 aaKnown RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 RNF152Q8N8N0 203 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 KLHL23Q8NBE8 558 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 GALNT11Q8NCW6 608 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 RNF214Q8ND24 703 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 PUM2Q8TB72 1066 aaKnown RBP eCLIP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ATRIPQ8WXE1 791 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 KAT5Q92993 513 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 USP13Q92995 863 aaPredicted RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 SECISBP2LQ93073 1101 aaKnown RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 MUL1Q969V5 352 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ZNF566Q969W8 418 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 RILPL2Q969X0 211 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ZBTB10Q96DT7 871 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 VMP1Q96GC9 406 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 FBXL18Q96ME1 805 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ZFP42Q96MM3 310 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 FANCD2OSQ96PS1 177 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ZFYVE21Q9BQ24 234 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ALG1Q9BT22 464 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 CNPPD1Q9BV87 410 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 DSCC1Q9BVC3 393 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 KATNAL1Q9BW62 490 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 FOXQ1Q9C009 403 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 LMAN2LQ9H0V9 348 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 GHITMQ9H3K2 345 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 SOX17Q9H6I2 414 aaPredicted RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ELAC1Q9H777 363 aaKnown RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ZMAT4Q9H898 229 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ZMAT3Q9HA38 289 aaKnown RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ZNF287Q9HBT7 754 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 SMURF1Q9HCE7 757 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 PREBQ9HCU5 417 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 UBN1Q9NPG3 1134 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ZNF277Q9NRM2 450 aaPredicted RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 RASSF1Q9NS23 344 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 OLA1Q9NTK5 396 aaKnown RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 GPATCH2Q9NW75 528 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 CWC25Q9NXE8 425 aaPredicted RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 TOR4AQ9NXH8 423 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 DACT1Q9NYF0 836 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 CRIM1Q9NZV1 1036 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 ZSWIM5Q9P217 1185 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 KIF17Q9P2E2 1029 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 CPA4Q9UI42 421 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 MSRAQ9UJ68 235 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 DNMT3LQ9UJW3 386 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 GPR34Q9UPC5 381 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 SF3B6Q9Y3B4 125 aaKnown RBP1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 DAGLAQ9Y4D2 1042 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 PCDHB12Q9Y5F1 795 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 PCDHB1Q9Y5F3 818 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 PCDHGC5Q9Y5F6 944 aa1.77□□□□□ -2.13
RNU1-78P-201ENST00000391248 PCDHA3Q9Y5H8 950 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms