RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 LIFRP42702 1097 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 MAGEA9P43362 315 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 HNRNPH2P55795 449 aaKnown RBP8.39□□□□□ -1.07
TRBV28-201ENST00000390400 NFX1Q12986 1120 aaKnown RBP8.39□□□□□ -1.07
TRBV28-201ENST00000390400 SEPT6Q14141 434 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 RPS26P11Q5JNZ5 115 aaPredicted RBP8.39□□□□□ -1.07
TRBV28-201ENST00000390400 RCSD1Q6JBY9 416 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 CATIPQ7Z7H3 387 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 CCAR2Q8N163 923 aaKnown RBP8.39□□□□□ -1.07
TRBV28-201ENST00000390400 FBXL16Q8N461 479 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 GPR161Q8N6U8 529 aaKnown RBP8.39□□□□□ -1.07
TRBV28-201ENST00000390400 IGDCC4Q8TDY8 1250 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 PPM1EQ8WY54 764 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 ANKS1AQ92625 1134 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 BRF1Q92994 677 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 NKD1Q969G9 470 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 CLMNQ96JQ2 1002 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 SPACA7Q96KW9 195 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 CEP89Q96ST8 783 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 MDFIQ99750 246 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 TRIM5Q9C035 493 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 TNMDQ9H2S6 317 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 SH2D4AQ9H788 454 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 KAT14Q9H8E8 782 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 AS3MTQ9HBK9 375 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.39□□□□□ -1.07
TRBV28-201ENST00000390400 ZNF215Q9UL58 517 aaPredicted RBP8.39□□□□□ -1.07
TRBV28-201ENST00000390400 SYNPO2Q9UMS6 1093 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 TRIM33Q9UPN9 1127 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 FHOD1Q9Y613 1164 aa8.39□□□□□ -1.07
TRBV28-201ENST00000390400 PHIPQ8WWQ0 1821 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 KLF18A0A0U1RQI7 1052 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 A6NNZ2 444 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 LCE2BO14633 110 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 SELPP16109 830 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 CALRP27797 417 aaKnown RBP8.38□□□□□ -1.07
TRBV28-201ENST00000390400 NOP2P46087 812 aaKnown RBP8.38□□□□□ -1.07
TRBV28-201ENST00000390400 NOVP48745 357 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 ZNF165P49910 485 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 AK2P54819 239 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 HUNKP57058 714 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 PPATQ06203 517 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 TOB2Q14106 344 aaPredicted RBP8.38□□□□□ -1.07
TRBV28-201ENST00000390400 BRD3Q15059 726 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 STX1AQ16623 288 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 TUBB8Q3ZCM7 444 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 SEZ6Q53EL9 994 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 SYNE3Q6ZMZ3 975 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 NOL8Q76FK4 1167 aaKnown RBP8.38□□□□□ -1.07
TRBV28-201ENST00000390400 CCDC84Q86UT8 332 aaPredicted RBP8.38□□□□□ -1.07
TRBV28-201ENST00000390400 SGMS1Q86VZ5 419 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 ERO1BQ86YB8 467 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 TRIM42Q8IWZ5 723 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 DRC7Q8IY82 874 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 LRRC47Q8N1G4 583 aaKnown RBP8.38□□□□□ -1.07
TRBV28-201ENST00000390400 ACER1Q8TDN7 264 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 TMEM47Q9BQJ4 181 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 WDR18Q9BV38 432 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 AGXT2Q9BYV1 514 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 UBE2OQ9C0C9 1292 aaKnown RBP8.38□□□□□ -1.07
TRBV28-201ENST00000390400 ZSCAN16Q9H4T2 348 aaPredicted RBP8.38□□□□□ -1.07
TRBV28-201ENST00000390400 CBX8Q9HC52 389 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 SENP2Q9HC62 589 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 TMEM39AQ9NV64 488 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 ANO10Q9NW15 660 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 BCCIPQ9P287 314 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRBV28-201ENST00000390400 CFAP45Q9UL16 551 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 ABT1Q9ULW3 272 aaKnown RBP8.38□□□□□ -1.07
TRBV28-201ENST00000390400 SLC12A7Q9Y666 1083 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 ZHX2Q9Y6X8 837 aa8.38□□□□□ -1.07
TRBV28-201ENST00000390400 PTPRFP10586 1907 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 CCDC151A5D8V7 595 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 FAM221BA6H8Z2 402 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 GOLGA6L4A6NEF3 574 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 TRIM75PA6NK02 468 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 GOLGA8BA8MQT2 603 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 MYO1CO00159 1063 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 ZBTB43O43298 467 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 DHX16O60231 1041 aaKnown RBP8.37□□□□□ -1.07
TRBV28-201ENST00000390400 EIF3JO75822 258 aaKnown RBP8.37□□□□□ -1.07
TRBV28-201ENST00000390400 DDAH1O94760 285 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 SKILP12757 684 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 EIF2AK2P19525 551 aaKnown RBP8.37□□□□□ -1.07
TRBV28-201ENST00000390400 ACTN2P35609 894 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 RPS26P62854 115 aaKnown RBP8.37□□□□□ -1.07
TRBV28-201ENST00000390400 PCDH1Q08174 1060 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 APOBRQ0VD83 1088 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 SPP2Q13103 211 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 PPIL2Q13356 520 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 GAS6Q14393 721 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 TCEAL1Q15170 157 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 ZSCAN26Q16670 478 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 ZNF468Q5VIY5 522 aaPredicted RBP8.37□□□□□ -1.07
TRBV28-201ENST00000390400 SDE2Q6IQ49 451 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 APOA5Q6Q788 366 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 LEKR1Q6ZMV7 388 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 CCDC91Q7Z6B0 441 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 SRLQ86TD4 932 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 SAPCD2Q86UD0 394 aa8.37□□□□□ -1.07
TRBV28-201ENST00000390400 SIAH1Q8IUQ4 282 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms